Protein–RNA interactions for Protein: A0A075B6T7

TRAV6, T-cell receptor alpha variable 6 (Fragment), humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV6A0A075B6T7 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
TRAV6A0A075B6T7 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV6A0A075B6T7 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV6A0A075B6T7 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV6A0A075B6T7 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV6A0A075B6T7 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
TRAV6A0A075B6T7 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV6A0A075B6T7 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV6A0A075B6T7 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC17.27■□□□□ 0.36
TRAV6A0A075B6T7 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
TRAV6A0A075B6T7 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC17.27■□□□□ 0.36
TRAV6A0A075B6T7 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC17.27■□□□□ 0.36
TRAV6A0A075B6T7 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TRAV6A0A075B6T7 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRAV6A0A075B6T7 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRAV6A0A075B6T7 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.27■□□□□ 0.35
TRAV6A0A075B6T7 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.27■□□□□ 0.35
TRAV6A0A075B6T7 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
TRAV6A0A075B6T7 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRAV6A0A075B6T7 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
TRAV6A0A075B6T7 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV6A0A075B6T7 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC17.26■□□□□ 0.35
TRAV6A0A075B6T7 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV6A0A075B6T7 AC011484.1-201ENST00000377652 1995 ntBASIC17.26■□□□□ 0.35
TRAV6A0A075B6T7 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.26■□□□□ 0.35
TRAV6A0A075B6T7 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV6A0A075B6T7 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV6A0A075B6T7 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV6A0A075B6T7 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV6A0A075B6T7 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV6A0A075B6T7 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC17.26■□□□□ 0.35
TRAV6A0A075B6T7 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
TRAV6A0A075B6T7 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV6A0A075B6T7 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV6A0A075B6T7 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV6A0A075B6T7 Z82202.1-201ENST00000623446 1880 ntBASIC17.26■□□□□ 0.35
TRAV6A0A075B6T7 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV6A0A075B6T7 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV6A0A075B6T7 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV6A0A075B6T7 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV6A0A075B6T7 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV6A0A075B6T7 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC17.25■□□□□ 0.35
TRAV6A0A075B6T7 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV6A0A075B6T7 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV6A0A075B6T7 pRNA.6-201ENST00000610482 90 ntBASIC17.25■□□□□ 0.35
TRAV6A0A075B6T7 pRNA.5-201ENST00000612139 90 ntBASIC17.25■□□□□ 0.35
TRAV6A0A075B6T7 pRNA.11-201ENST00000618423 90 ntBASIC17.25■□□□□ 0.35
TRAV6A0A075B6T7 pRNA.13-201ENST00000619112 90 ntBASIC17.25■□□□□ 0.35
TRAV6A0A075B6T7 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
TRAV6A0A075B6T7 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV6A0A075B6T7 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC17.25■□□□□ 0.35
TRAV6A0A075B6T7 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV6A0A075B6T7 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
TRAV6A0A075B6T7 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV6A0A075B6T7 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC17.25■□□□□ 0.35
TRAV6A0A075B6T7 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV6A0A075B6T7 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV6A0A075B6T7 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV6A0A075B6T7 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.24■□□□□ 0.35
TRAV6A0A075B6T7 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV6A0A075B6T7 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC17.24■□□□□ 0.35
TRAV6A0A075B6T7 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV6A0A075B6T7 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV6A0A075B6T7 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
TRAV6A0A075B6T7 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
TRAV6A0A075B6T7 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.24■□□□□ 0.35
TRAV6A0A075B6T7 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV6A0A075B6T7 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV6A0A075B6T7 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV6A0A075B6T7 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
TRAV6A0A075B6T7 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
TRAV6A0A075B6T7 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC17.24■□□□□ 0.35
TRAV6A0A075B6T7 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV6A0A075B6T7 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV6A0A075B6T7 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV6A0A075B6T7 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
TRAV6A0A075B6T7 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
TRAV6A0A075B6T7 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.24■□□□□ 0.35
TRAV6A0A075B6T7 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV6A0A075B6T7 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.24■□□□□ 0.35
TRAV6A0A075B6T7 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.24■□□□□ 0.35
TRAV6A0A075B6T7 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
TRAV6A0A075B6T7 AC018470.1-201ENST00000624790 3129 ntBASIC17.24■□□□□ 0.35
TRAV6A0A075B6T7 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV6A0A075B6T7 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.24■□□□□ 0.35
TRAV6A0A075B6T7 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV6A0A075B6T7 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV6A0A075B6T7 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.24■□□□□ 0.35
TRAV6A0A075B6T7 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV6A0A075B6T7 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV6A0A075B6T7 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV6A0A075B6T7 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV6A0A075B6T7 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.23■□□□□ 0.35
TRAV6A0A075B6T7 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV6A0A075B6T7 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV6A0A075B6T7 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV6A0A075B6T7 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV6A0A075B6T7 BX005040.4-201ENST00000637145 1518 ntBASIC17.23■□□□□ 0.35
TRAV6A0A075B6T7 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
TRAV6A0A075B6T7 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms