Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 KDM8-211ENST00000568792 561 ntTSL 410.79□□□□□ -0.689e-6■■□□□ 12.6
PRPF8Q6P2Q9 PKD1P6-NPIPP1-201ENST00000340301 547 ntTSL 510.72□□□□□ -0.699e-6■■□□□ 12.6
PRPF8Q6P2Q9 RIC8B-201ENST00000355478 3207 ntTSL 1 (best) BASIC10.61□□□□□ -0.719e-6■■□□□ 12.6
PRPF8Q6P2Q9 ZNF101-203ENST00000415784 1552 ntTSL 1 (best) BASIC10.59□□□□□ -0.719e-6■■□□□ 12.6
PRPF8Q6P2Q9 PLEKHA6-203ENST00000485632 312 ntTSL 310.59□□□□□ -0.713e-8■■□□□ 12.6
PRPF8Q6P2Q9 TBC1D5-204ENST00000414349 687 ntTSL 310.57□□□□□ -0.729e-6■■□□□ 12.6
PRPF8Q6P2Q9 PTOV1-204ENST00000594640 490 ntTSL 310.54□□□□□ -0.729e-6■■□□□ 12.6
PRPF8Q6P2Q9 BANP-208ENST00000436970 560 ntTSL 510.5□□□□□ -0.739e-6■■□□□ 12.6
PRPF8Q6P2Q9 APOL1-208ENST00000431184 550 ntTSL 410.44□□□□□ -0.749e-7■■□□□ 12.6
PRPF8Q6P2Q9 APOL1-211ENST00000439680 531 ntTSL 410.44□□□□□ -0.749e-7■■□□□ 12.6
PRPF8Q6P2Q9 NREP-218ENST00000509427 587 ntAPPRIS P1 TSL 3 BASIC10.41□□□□□ -0.743e-18■■□□□ 12.6
PRPF8Q6P2Q9 LINC00969-264ENST00000626089 792 ntTSL 510.4□□□□□ -0.749e-6■■□□□ 12.6
PRPF8Q6P2Q9 ZNF720-211ENST00000539915 837 ntTSL 3 BASIC10.39□□□□□ -0.759e-6■■□□□ 12.6
PRPF8Q6P2Q9 YIPF6-201ENST00000374622 6134 ntTSL 2 BASIC10.38□□□□□ -0.759e-6■■□□□ 12.6
PRPF8Q6P2Q9 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.753e-6■■□□□ 12.6
PRPF8Q6P2Q9 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.759e-6■■□□□ 12.6
PRPF8Q6P2Q9 FAM204A-202ENST00000369172 872 ntAPPRIS P1 TSL 3 BASIC10.36□□□□□ -0.759e-6■■□□□ 12.6
PRPF8Q6P2Q9 ZNF720-207ENST00000531864 1670 ntTSL 210.35□□□□□ -0.759e-6■■□□□ 12.6
PRPF8Q6P2Q9 COLGALT1-202ENST00000593832 2941 ntTSL 210.33□□□□□ -0.764e-7■■□□□ 12.6
PRPF8Q6P2Q9 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.769e-6■■□□□ 12.6
PRPF8Q6P2Q9 ELAVL1-203ENST00000595499 799 ntTSL 310.28□□□□□ -0.764e-16■■□□□ 12.6
PRPF8Q6P2Q9 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.769e-6■■□□□ 12.6
PRPF8Q6P2Q9 B4GALT7-206ENST00000507061 410 ntTSL 210.27□□□□□ -0.779e-6■■□□□ 12.6
PRPF8Q6P2Q9 TRIM16L-207ENST00000571708 1703 ntTSL 1 (best)10.24□□□□□ -0.779e-6■■□□□ 12.6
PRPF8Q6P2Q9 EFCAB2-213ENST00000497591 1201 ntTSL 510.24□□□□□ -0.779e-6■■□□□ 12.6
PRPF8Q6P2Q9 DOCK5-212ENST00000521405 1836 ntTSL 210.22□□□□□ -0.778e-12■■□□□ 12.6
PRPF8Q6P2Q9 EFCAB2-201ENST00000366521 860 ntTSL 210.21□□□□□ -0.779e-6■■□□□ 12.6
PRPF8Q6P2Q9 GHITM-201ENST00000372134 2128 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.792e-7■■□□□ 12.6
PRPF8Q6P2Q9 TXNDC9-205ENST00000434323 733 ntTSL 5 BASIC10.05□□□□□ -0.89e-6■■□□□ 12.6
PRPF8Q6P2Q9 PTOV1-AS2-201ENST00000593654 596 ntTSL 2 BASIC10.05□□□□□ -0.84e-6■■□□□ 12.6
PRPF8Q6P2Q9 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC10.02□□□□□ -0.819e-6■■□□□ 12.6
PRPF8Q6P2Q9 PVT1-215ENST00000522963 568 ntTSL 49.95□□□□□ -0.821e-10■■□□□ 12.6
PRPF8Q6P2Q9 LSG1-204ENST00000460584 668 ntTSL 29.94□□□□□ -0.823e-8■■□□□ 12.6
PRPF8Q6P2Q9 ZNF549-201ENST00000240719 3969 ntAPPRIS P3 TSL 2 BASIC9.94□□□□□ -0.829e-6■■□□□ 12.6
PRPF8Q6P2Q9 C14orf159-232ENST00000523894 862 ntTSL 1 (best)9.94□□□□□ -0.829e-6■■□□□ 12.6
PRPF8Q6P2Q9 MKLN1-AS-202ENST00000429067 2043 ntTSL 2 BASIC9.92□□□□□ -0.829e-6■■□□□ 12.6
PRPF8Q6P2Q9 PIGL-214ENST00000585034 1345 ntTSL 29.89□□□□□ -0.831e-10■■□□□ 12.6
PRPF8Q6P2Q9 DBNDD1-207ENST00000623401 2889 nt9.81□□□□□ -0.849e-6■■□□□ 12.6
PRPF8Q6P2Q9 SNAPC2-205ENST00000596520 457 ntTSL 29.8□□□□□ -0.849e-6■■□□□ 12.6
PRPF8Q6P2Q9 SLC27A5-206ENST00000599700 474 ntTSL 29.8□□□□□ -0.849e-6■■□□□ 12.6
PRPF8Q6P2Q9 AGO2-204ENST00000519347 309 ntTSL 39.76□□□□□ -0.855e-14■■□□□ 12.6
PRPF8Q6P2Q9 APOL1-207ENST00000427990 624 ntTSL 39.71□□□□□ -0.869e-7■■□□□ 12.6
PRPF8Q6P2Q9 VPS16-206ENST00000466415 708 ntTSL 29.67□□□□□ -0.869e-6■■□□□ 12.6
PRPF8Q6P2Q9 ZNF101-204ENST00000444249 1152 ntTSL 1 (best) BASIC9.65□□□□□ -0.869e-6■■□□□ 12.6
PRPF8Q6P2Q9 DDHD1-210ENST00000612692 12339 ntTSL 1 (best) BASIC9.64□□□□□ -0.879e-6■■□□□ 12.6
PRPF8Q6P2Q9 TXNDC9-208ENST00000465183 599 ntTSL 29.64□□□□□ -0.879e-6■■□□□ 12.6
PRPF8Q6P2Q9 NPIPP1-202ENST00000534799 1214 ntTSL 3 BASIC9.61□□□□□ -0.879e-6■■□□□ 12.6
PRPF8Q6P2Q9 NLRX1-214ENST00000525863 2850 ntTSL 5 BASIC9.61□□□□□ -0.879e-6■■□□□ 12.6
PRPF8Q6P2Q9 SLC27A5-208ENST00000601997 575 ntTSL 29.58□□□□□ -0.889e-6■■□□□ 12.6
PRPF8Q6P2Q9 APOL1-210ENST00000438034 566 ntTSL 49.53□□□□□ -0.889e-7■■□□□ 12.6
PRPF8Q6P2Q9 KDM8-201ENST00000286096 2462 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.899e-6■■□□□ 12.6
PRPF8Q6P2Q9 NREP-208ENST00000453526 559 ntAPPRIS P1 TSL 4 BASIC9.48□□□□□ -0.893e-18■■□□□ 12.6
PRPF8Q6P2Q9 EFCAB2-208ENST00000473686 906 ntTSL 59.45□□□□□ -0.99e-6■■□□□ 12.6
PRPF8Q6P2Q9 SIRT1-204ENST00000432464 3587 ntTSL 5 BASIC9.41□□□□□ -0.99e-6■■□□□ 12.6
PRPF8Q6P2Q9 PDPR-206ENST00000564563 2381 ntTSL 29.4□□□□□ -0.919e-6■■□□□ 12.6
PRPF8Q6P2Q9 DDHD1-203ENST00000395606 12769 ntAPPRIS ALT2 TSL 2 BASIC9.39□□□□□ -0.919e-6■■□□□ 12.6
PRPF8Q6P2Q9 LINC00969-212ENST00000445430 4208 ntTSL 1 (best) BASIC9.37□□□□□ -0.919e-6■■□□□ 12.6
PRPF8Q6P2Q9 ZDHHC7-207ENST00000569377 608 ntTSL 29.33□□□□□ -0.929e-6■■□□□ 12.6
PRPF8Q6P2Q9 KNL1-206ENST00000528975 578 ntTSL 49.25□□□□□ -0.939e-7■■□□□ 12.6
PRPF8Q6P2Q9 RDH11-210ENST00000557331 553 ntTSL 49.22□□□□□ -0.939e-7■■□□□ 12.6
PRPF8Q6P2Q9 TBC1D5-202ENST00000412981 592 ntTSL 39.21□□□□□ -0.949e-6■■□□□ 12.6
PRPF8Q6P2Q9 TBC1D5-215ENST00000443499 681 ntTSL 59.21□□□□□ -0.949e-6■■□□□ 12.6
PRPF8Q6P2Q9 LYSMD4-206ENST00000479791 3001 ntTSL 59.18□□□□□ -0.949e-6■■□□□ 12.6
PRPF8Q6P2Q9 HEMK1-205ENST00000448997 5757 ntTSL 29.16□□□□□ -0.943e-7■■□□□ 12.6
PRPF8Q6P2Q9 NREP-212ENST00000505864 701 ntTSL 39.09□□□□□ -0.953e-18■■□□□ 12.6
PRPF8Q6P2Q9 NREP-215ENST00000508161 475 ntTSL 39.09□□□□□ -0.953e-18■■□□□ 12.6
PRPF8Q6P2Q9 LSG1-207ENST00000475763 590 ntTSL 39.07□□□□□ -0.963e-8■■□□□ 12.6
PRPF8Q6P2Q9 PDPR-208ENST00000567046 1207 ntTSL 2 BASIC9.07□□□□□ -0.969e-6■■□□□ 12.6
PRPF8Q6P2Q9 IPO5-204ENST00000421861 564 ntTSL 49.03□□□□□ -0.968e-12■■□□□ 12.6
PRPF8Q6P2Q9 RDH11-209ENST00000557273 562 ntTSL 39.02□□□□□ -0.979e-7■■□□□ 12.6
PRPF8Q6P2Q9 CDYL-202ENST00000343762 3241 ntTSL 1 (best) BASIC8.99□□□□□ -0.976e-6■■□□□ 12.6
PRPF8Q6P2Q9 TRIM16L-209ENST00000572555 1809 ntTSL 28.93□□□□□ -0.989e-6■■□□□ 12.6
PRPF8Q6P2Q9 KMT2D-204ENST00000549743 615 ntTSL 38.92□□□□□ -0.983e-8■■□□□ 12.6
PRPF8Q6P2Q9 NREP-213ENST00000507032 311 ntTSL 58.85□□□□□ -0.993e-18■■□□□ 12.6
PRPF8Q6P2Q9 MFSD8-257ENST00000642012 1711 nt8.82□□□□□ -19e-6■■□□□ 12.6
PRPF8Q6P2Q9 TBC1D5-208ENST00000428355 757 ntTSL 38.81□□□□□ -19e-6■■□□□ 12.6
PRPF8Q6P2Q9 KDM8-210ENST00000567785 1037 ntTSL 1 (best)8.8□□□□□ -19e-6■■□□□ 12.6
PRPF8Q6P2Q9 LIG1-209ENST00000596104 531 ntTSL 38.76□□□□□ -1.019e-6■■□□□ 12.6
PRPF8Q6P2Q9 ZNF714-206ENST00000613286 2696 ntTSL 1 (best)8.76□□□□□ -1.019e-6■■□□□ 12.6
PRPF8Q6P2Q9 ZNF549-202ENST00000376233 4053 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.019e-6■■□□□ 12.6
PRPF8Q6P2Q9 RFC1-210ENST00000505077 566 ntTSL 48.7□□□□□ -1.029e-6■■□□□ 12.6
PRPF8Q6P2Q9 PDPR-209ENST00000567896 690 ntTSL 28.63□□□□□ -1.039e-6■■□□□ 12.6
PRPF8Q6P2Q9 PDPR-211ENST00000569042 598 ntTSL 48.58□□□□□ -1.049e-6■■□□□ 12.6
PRPF8Q6P2Q9 BEND3-201ENST00000369042 6200 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.049e-6■■□□□ 12.6
PRPF8Q6P2Q9 TBC1D5-229ENST00000497531 672 ntTSL 38.55□□□□□ -1.049e-6■■□□□ 12.6
PRPF8Q6P2Q9 TBC1D5-211ENST00000430169 492 ntTSL 38.52□□□□□ -1.059e-6■■□□□ 12.6
PRPF8Q6P2Q9 MRPS5-203ENST00000461916 793 ntTSL 28.51□□□□□ -1.053e-8■■□□□ 12.6
PRPF8Q6P2Q9 RPARP-AS1-203ENST00000494270 711 ntTSL 2 BASIC8.46□□□□□ -1.059e-6■■□□□ 12.6
PRPF8Q6P2Q9 ERI3-202ENST00000372259 1332 ntTSL 5 BASIC8.45□□□□□ -1.069e-6■■□□□ 12.6
PRPF8Q6P2Q9 RIC8B-205ENST00000470628 2134 ntTSL 1 (best)8.44□□□□□ -1.069e-6■■□□□ 12.6
PRPF8Q6P2Q9 SSH1-205ENST00000546812 588 ntTSL 38.42□□□□□ -1.069e-6■■□□□ 12.6
PRPF8Q6P2Q9 ZNF232-205ENST00000573015 1553 ntTSL 58.39□□□□□ -1.073e-8■■□□□ 12.6
PRPF8Q6P2Q9 KNL1-208ENST00000532056 259 ntTSL 38.37□□□□□ -1.079e-7■■□□□ 12.6
PRPF8Q6P2Q9 NLRX1-203ENST00000409265 3665 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.079e-6■■□□□ 12.6
PRPF8Q6P2Q9 APOL1-212ENST00000475519 600 ntTSL 48.35□□□□□ -1.079e-7■■□□□ 12.6
PRPF8Q6P2Q9 RIC8B-204ENST00000462949 3389 ntTSL 28.32□□□□□ -1.089e-6■■□□□ 12.6
PRPF8Q6P2Q9 MCM9-204ENST00000425154 752 ntTSL 38.32□□□□□ -1.089e-6■■□□□ 12.6
PRPF8Q6P2Q9 WDFY1-203ENST00000462702 361 ntTSL 38.31□□□□□ -1.089e-6■■□□□ 12.6
PRPF8Q6P2Q9 ZNF232-208ENST00000575898 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.083e-8■■□□□ 12.6
PRPF8Q6P2Q9 ZNF248-203ENST00000395867 5141 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.099e-6■■□□□ 12.6
Retrieved 100 of 73,762 protein–RNA pairs in 938.4 ms