RNA–Protein interactions for RNA: ENST00000395867.7

ZNF248-203, Transcript of zinc finger protein 248, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF248, Length 5,141 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248-203ENST00000395867 NISCHQ9Y2I1 1504 aa21.85■■□□□ 1.09
ZNF248-203ENST00000395867 DCAF8L2P0C7V8 631 aa19.65■□□□□ 0.74
ZNF248-203ENST00000395867 CCDC180Q9P1Z9 1646 aa18.82■□□□□ 0.6
ZNF248-203ENST00000395867 SHROOM4Q9ULL8 1493 aa18.78■□□□□ 0.6
ZNF248-203ENST00000395867 SUPT5HO00267 1087 aaKnown RBP18.73■□□□□ 0.59
ZNF248-203ENST00000395867 ZCCHC6Q5VYS8 1495 aaKnown RBP18.27■□□□□ 0.52
ZNF248-203ENST00000395867 ABCC9O60706 1549 aa18.03■□□□□ 0.48
ZNF248-203ENST00000395867 DCAF1Q9Y4B6 1507 aa18■□□□□ 0.47
ZNF248-203ENST00000395867 NACADO15069 1562 aa17.85■□□□□ 0.45
ZNF248-203ENST00000395867 RB1CC1Q8TDY2 1594 aa17.79■□□□□ 0.44
ZNF248-203ENST00000395867 TRIM41Q8WV44 630 aa17.78■□□□□ 0.44
ZNF248-203ENST00000395867 FAM9AQ8IZU1 332 aaPredicted RBP17.71■□□□□ 0.43
ZNF248-203ENST00000395867 MYO15BQ96JP2 1530 aa17.69■□□□□ 0.42
ZNF248-203ENST00000395867 APLP2Q06481 763 aa17.67■□□□□ 0.42
ZNF248-203ENST00000395867 SCRIBQ14160 1630 aa17.58■□□□□ 0.4
ZNF248-203ENST00000395867 CHIC1Q5VXU3 224 aa17.43■□□□□ 0.38
ZNF248-203ENST00000395867 ZEB1P37275 1124 aaPredicted RBP17.35■□□□□ 0.37
ZNF248-203ENST00000395867 PABPN1Q86U42 306 aaKnown RBP eCLIP17.28■□□□□ 0.36
ZNF248-203ENST00000395867 UBTFP17480 764 aaKnown RBP17.26■□□□□ 0.35
ZNF248-203ENST00000395867 BAZ1AQ9NRL2 1556 aaPredicted RBP17.19■□□□□ 0.34
ZNF248-203ENST00000395867 EHMT2Q96KQ7 1210 aa17.17■□□□□ 0.34
ZNF248-203ENST00000395867 RSF1Q96T23 1441 aaPredicted RBP17.1■□□□□ 0.33
ZNF248-203ENST00000395867 TRIM26Q12899 539 aaPredicted RBP17.05■□□□□ 0.32
ZNF248-203ENST00000395867 PCGF6Q9BYE7 350 aa17.02■□□□□ 0.31
ZNF248-203ENST00000395867 EEA1Q15075 1411 aa16.94■□□□□ 0.3
ZNF248-203ENST00000395867 BAZ1BQ9UIG0 1483 aaKnown RBP16.9■□□□□ 0.3
ZNF248-203ENST00000395867 SMARCA2P51531 1590 aa16.89■□□□□ 0.29
ZNF248-203ENST00000395867 CCER1Q8TC90 406 aaPredicted RBP16.81■□□□□ 0.28
ZNF248-203ENST00000395867 CSRNP3Q8WYN3 585 aa16.8■□□□□ 0.28
ZNF248-203ENST00000395867 ATP1B4Q9UN42 357 aaPredicted RBP16.77■□□□□ 0.28
ZNF248-203ENST00000395867 RANGAP1P46060 587 aaPredicted RBP16.76■□□□□ 0.27
ZNF248-203ENST00000395867 LOC105371045A0A1W2PR82 267 aa16.76■□□□□ 0.27
ZNF248-203ENST00000395867 TOP2AP11388 1531 aaKnown RBP16.74■□□□□ 0.27
ZNF248-203ENST00000395867 CECR2Q9BXF3 1484 aa16.7■□□□□ 0.26
ZNF248-203ENST00000395867 PELP1Q8IZL8 1130 aaKnown RBP16.7■□□□□ 0.26
ZNF248-203ENST00000395867 MROH2BQ7Z745 1585 aa16.68■□□□□ 0.26
ZNF248-203ENST00000395867 SMARCA4P51532 1647 aa16.65■□□□□ 0.26
ZNF248-203ENST00000395867 WRNQ14191 1432 aaPredicted RBP eCLIP16.63■□□□□ 0.25
ZNF248-203ENST00000395867 TTBK1Q5TCY1 1321 aaPredicted RBP16.62■□□□□ 0.25
ZNF248-203ENST00000395867 HRCP23327 699 aa16.58■□□□□ 0.25
ZNF248-203ENST00000395867 GOLGA3Q08378 1498 aa16.56■□□□□ 0.24
ZNF248-203ENST00000395867 CCDC88BA6NC98 1476 aa16.51■□□□□ 0.23
ZNF248-203ENST00000395867 CEP164Q9UPV0 1460 aa16.5■□□□□ 0.23
ZNF248-203ENST00000395867 CENPBP07199 599 aaPredicted RBP16.49■□□□□ 0.23
ZNF248-203ENST00000395867 KIF27Q86VH2 1401 aa16.49■□□□□ 0.23
ZNF248-203ENST00000395867 WIZO95785 1651 aa16.47■□□□□ 0.23
ZNF248-203ENST00000395867 ATAD2BQ9ULI0 1458 aa16.46■□□□□ 0.23
ZNF248-203ENST00000395867 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.43■□□□□ 0.22
ZNF248-203ENST00000395867 HNRNPUL2Q1KMD3 747 aaKnown RBP16.43■□□□□ 0.22
ZNF248-203ENST00000395867 TNIKQ9UKE5 1360 aa16.43■□□□□ 0.22
ZNF248-203ENST00000395867 ACIN1Q9UKV3 1341 aaKnown RBP16.4■□□□□ 0.22
ZNF248-203ENST00000395867 CDK11AQ9UQ88 783 aaPredicted RBP16.39■□□□□ 0.21
ZNF248-203ENST00000395867 PDS5BQ9NTI5 1447 aa16.35■□□□□ 0.21
ZNF248-203ENST00000395867 CLIP1P30622 1438 aa16.34■□□□□ 0.21
ZNF248-203ENST00000395867 ABCC8Q09428 1581 aa16.33■□□□□ 0.2
ZNF248-203ENST00000395867 NCAPD3P42695 1498 aa16.32■□□□□ 0.2
ZNF248-203ENST00000395867 PPARGC1BQ86YN6 1023 aaKnown RBP16.31■□□□□ 0.2
ZNF248-203ENST00000395867 CEP162Q5TB80 1403 aa16.27■□□□□ 0.2
ZNF248-203ENST00000395867 HMGXB3Q12766 1538 aa16.27■□□□□ 0.19
ZNF248-203ENST00000395867 CADPSQ9ULU8 1353 aa16.26■□□□□ 0.19
ZNF248-203ENST00000395867 FAM50AQ14320 339 aaKnown RBP16.23■□□□□ 0.19
ZNF248-203ENST00000395867 EIF4G1Q04637 1599 aaKnown RBP16.21■□□□□ 0.19
ZNF248-203ENST00000395867 ITGAEP38570 1179 aa16.2■□□□□ 0.18
ZNF248-203ENST00000395867 FHAD1B1AJZ9 1412 aa16.18■□□□□ 0.18
ZNF248-203ENST00000395867 ERCC6Q03468 1493 aa16.17■□□□□ 0.18
ZNF248-203ENST00000395867 FBLN2P98095 1184 aa16.15■□□□□ 0.18
ZNF248-203ENST00000395867 CUX2O14529 1486 aa16.13■□□□□ 0.17
ZNF248-203ENST00000395867 PEG3Q9GZU2 1588 aa16.13■□□□□ 0.17
ZNF248-203ENST00000395867 CARMIL1Q5VZK9 1371 aa16.1■□□□□ 0.17
ZNF248-203ENST00000395867 MYT1LQ9UL68 1186 aa16.09■□□□□ 0.17
ZNF248-203ENST00000395867 BICRAQ9NZM4 1560 aa16.09■□□□□ 0.17
ZNF248-203ENST00000395867 CHMP7Q8WUX9 453 aaPredicted RBP16.08■□□□□ 0.17
ZNF248-203ENST00000395867 MTUS2Q5JR59 1369 aa16.05■□□□□ 0.16
ZNF248-203ENST00000395867 SOGA1O94964 1423 aa16.04■□□□□ 0.16
ZNF248-203ENST00000395867 TRIM52Q96A61 297 aa16.03■□□□□ 0.16
ZNF248-203ENST00000395867 FANCD2Q9BXW9 1451 aa16.02■□□□□ 0.15
ZNF248-203ENST00000395867 VPS8Q8N3P4 1428 aa16.01■□□□□ 0.15
ZNF248-203ENST00000395867 NEFLP07196 543 aa16.01■□□□□ 0.15
ZNF248-203ENST00000395867 P3H3Q8IVL6 736 aa16.01■□□□□ 0.15
ZNF248-203ENST00000395867 RAPGEF2Q9Y4G8 1499 aa16■□□□□ 0.15
ZNF248-203ENST00000395867 CFTRP13569 1480 aa15.98■□□□□ 0.15
ZNF248-203ENST00000395867 UNC13AQ9UPW8 1703 aa15.98■□□□□ 0.15
ZNF248-203ENST00000395867 FMN1Q68DA7 1419 aa15.95■□□□□ 0.14
ZNF248-203ENST00000395867 CLSPNQ9HAW4 1339 aa15.95■□□□□ 0.14
ZNF248-203ENST00000395867 NPM1P06748 294 aaKnown RBP eCLIP15.93■□□□□ 0.14
ZNF248-203ENST00000395867 KIF21BO75037 1637 aa15.91■□□□□ 0.14
ZNF248-203ENST00000395867 ZNF316A6NFI3 1004 aaPredicted RBP15.9■□□□□ 0.14
ZNF248-203ENST00000395867 ERICH3Q5RHP9 1530 aa15.9■□□□□ 0.14
ZNF248-203ENST00000395867 DIEXFQ68CQ4 756 aaKnown RBP15.9■□□□□ 0.14
ZNF248-203ENST00000395867 CARMIL2Q6F5E8 1435 aa15.9■□□□□ 0.14
ZNF248-203ENST00000395867 CC2D2AQ9P2K1 1620 aa15.88■□□□□ 0.13
ZNF248-203ENST00000395867 TOP2BQ02880 1626 aa15.88■□□□□ 0.13
ZNF248-203ENST00000395867 PLEKHD1A6NEE1 506 aa15.84■□□□□ 0.13
ZNF248-203ENST00000395867 LAMC3Q9Y6N6 1575 aa15.82■□□□□ 0.12
ZNF248-203ENST00000395867 FGD5Q6ZNL6 1462 aa15.81■□□□□ 0.12
ZNF248-203ENST00000395867 TONSLQ96HA7 1378 aa15.81■□□□□ 0.12
ZNF248-203ENST00000395867 TSPY4P0CV99 314 aa15.81■□□□□ 0.12
ZNF248-203ENST00000395867 TSPY10P0CW01 314 aa15.81■□□□□ 0.12
ZNF248-203ENST00000395867 NEUROD1Q13562 356 aa15.78■□□□□ 0.12
ZNF248-203ENST00000395867 ARHGAP35Q9NRY4 1499 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms