RNA–Protein interactions for RNA: ENST00000479791.1

LYSMD4-206, Transcript of LysM domain containing 4, humanhuman

TSL 5

Gene LYSMD4, Length 3,001 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-206ENST00000479791 NISCHQ9Y2I1 1504 aa25.23■■□□□ 1.63
LYSMD4-206ENST00000479791 HRCP23327 699 aa21.9■■□□□ 1.1
LYSMD4-206ENST00000479791 SHROOM4Q9ULL8 1493 aa21.86■■□□□ 1.09
LYSMD4-206ENST00000479791 SUPT5HO00267 1087 aaKnown RBP21.74■■□□□ 1.07
LYSMD4-206ENST00000479791 MYO15BQ96JP2 1530 aa21.54■■□□□ 1.04
LYSMD4-206ENST00000479791 CHIC1Q5VXU3 224 aa21.49■■□□□ 1.03
LYSMD4-206ENST00000479791 ZCCHC6Q5VYS8 1495 aaKnown RBP21.47■■□□□ 1.03
LYSMD4-206ENST00000479791 PCGF6Q9BYE7 350 aa21.41■■□□□ 1.02
LYSMD4-206ENST00000479791 PPARGC1BQ86YN6 1023 aaKnown RBP21.24■□□□□ 0.99
LYSMD4-206ENST00000479791 DCAF1Q9Y4B6 1507 aa21.24■□□□□ 0.99
LYSMD4-206ENST00000479791 CCDC180Q9P1Z9 1646 aa21.17■□□□□ 0.98
LYSMD4-206ENST00000479791 PELP1Q8IZL8 1130 aaKnown RBP20.98■□□□□ 0.95
LYSMD4-206ENST00000479791 TRIM26Q12899 539 aaPredicted RBP20.93■□□□□ 0.94
LYSMD4-206ENST00000479791 LOC105371045A0A1W2PR82 267 aa20.83■□□□□ 0.93
LYSMD4-206ENST00000479791 ZEB1P37275 1124 aaPredicted RBP20.78■□□□□ 0.92
LYSMD4-206ENST00000479791 DCAF8L2P0C7V8 631 aa20.66■□□□□ 0.9
LYSMD4-206ENST00000479791 SCAF1Q9H7N4 1312 aaKnown RBP20.52■□□□□ 0.88
LYSMD4-206ENST00000479791 ABCC9O60706 1549 aa20.37■□□□□ 0.85
LYSMD4-206ENST00000479791 TRIM41Q8WV44 630 aa20.25■□□□□ 0.83
LYSMD4-206ENST00000479791 RSF1Q96T23 1441 aaPredicted RBP20.2■□□□□ 0.82
LYSMD4-206ENST00000479791 MYT1Q01538 1121 aa20.16■□□□□ 0.82
LYSMD4-206ENST00000479791 ACIN1Q9UKV3 1341 aaKnown RBP20.15■□□□□ 0.82
LYSMD4-206ENST00000479791 RB1CC1Q8TDY2 1594 aa20.09■□□□□ 0.81
LYSMD4-206ENST00000479791 FAM9AQ8IZU1 332 aaPredicted RBP20.05■□□□□ 0.8
LYSMD4-206ENST00000479791 NEUROD1Q13562 356 aa20.03■□□□□ 0.8
LYSMD4-206ENST00000479791 CENPBP07199 599 aaPredicted RBP19.96■□□□□ 0.79
LYSMD4-206ENST00000479791 CCER1Q8TC90 406 aaPredicted RBP19.91■□□□□ 0.78
LYSMD4-206ENST00000479791 GTF3C3Q9Y5Q9 886 aa19.9■□□□□ 0.78
LYSMD4-206ENST00000479791 SCRIBQ14160 1630 aa19.9■□□□□ 0.78
LYSMD4-206ENST00000479791 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.89■□□□□ 0.78
LYSMD4-206ENST00000479791 DIEXFQ68CQ4 756 aaKnown RBP19.89■□□□□ 0.77
LYSMD4-206ENST00000479791 EHMT2Q96KQ7 1210 aa19.81■□□□□ 0.76
LYSMD4-206ENST00000479791 WRNQ14191 1432 aaPredicted RBP eCLIP19.69■□□□□ 0.74
LYSMD4-206ENST00000479791 MROH2BQ7Z745 1585 aa19.62■□□□□ 0.73
LYSMD4-206ENST00000479791 CECR2Q9BXF3 1484 aa19.61■□□□□ 0.73
LYSMD4-206ENST00000479791 ZNF316A6NFI3 1004 aaPredicted RBP19.59■□□□□ 0.73
LYSMD4-206ENST00000479791 EIF4G1Q04637 1599 aaKnown RBP19.58■□□□□ 0.72
LYSMD4-206ENST00000479791 WIZO95785 1651 aa19.54■□□□□ 0.72
LYSMD4-206ENST00000479791 BAZ1AQ9NRL2 1556 aaPredicted RBP19.51■□□□□ 0.71
LYSMD4-206ENST00000479791 CEP162Q5TB80 1403 aa19.49■□□□□ 0.71
LYSMD4-206ENST00000479791 TNIKQ9UKE5 1360 aa19.45■□□□□ 0.7
LYSMD4-206ENST00000479791 NACADO15069 1562 aa19.44■□□□□ 0.7
LYSMD4-206ENST00000479791 YTHDC1Q96MU7 727 aaKnown RBP19.38■□□□□ 0.69
LYSMD4-206ENST00000479791 CCDC88BA6NC98 1476 aa19.36■□□□□ 0.69
LYSMD4-206ENST00000479791 MIER1Q8N108 512 aa19.35■□□□□ 0.69
LYSMD4-206ENST00000479791 TTBK1Q5TCY1 1321 aaPredicted RBP19.35■□□□□ 0.69
LYSMD4-206ENST00000479791 EEA1Q15075 1411 aa19.35■□□□□ 0.69
LYSMD4-206ENST00000479791 ABCC8Q09428 1581 aa19.31■□□□□ 0.68
LYSMD4-206ENST00000479791 TOP2AP11388 1531 aaKnown RBP19.27■□□□□ 0.68
LYSMD4-206ENST00000479791 SOGA1O94964 1423 aa19.27■□□□□ 0.67
LYSMD4-206ENST00000479791 CLSPNQ9HAW4 1339 aa19.25■□□□□ 0.67
LYSMD4-206ENST00000479791 CSRNP3Q8WYN3 585 aa19.25■□□□□ 0.67
LYSMD4-206ENST00000479791 GOLGA3Q08378 1498 aa19.21■□□□□ 0.67
LYSMD4-206ENST00000479791 UBTFP17480 764 aaKnown RBP19.19■□□□□ 0.66
LYSMD4-206ENST00000479791 SMARCA2P51531 1590 aa19.17■□□□□ 0.66
LYSMD4-206ENST00000479791 RUSC2Q8N2Y8 1516 aa19.12■□□□□ 0.65
LYSMD4-206ENST00000479791 HNRNPUL2Q1KMD3 747 aaKnown RBP19.1■□□□□ 0.65
LYSMD4-206ENST00000479791 SMARCA4P51532 1647 aa19.08■□□□□ 0.64
LYSMD4-206ENST00000479791 CEP164Q9UPV0 1460 aa19.04■□□□□ 0.64
LYSMD4-206ENST00000479791 SUPT16HQ9Y5B9 1047 aaKnown RBP19.04■□□□□ 0.64
LYSMD4-206ENST00000479791 KIF21BO75037 1637 aa19.03■□□□□ 0.64
LYSMD4-206ENST00000479791 VPS8Q8N3P4 1428 aa19.01■□□□□ 0.63
LYSMD4-206ENST00000479791 CLIP1P30622 1438 aa19■□□□□ 0.63
LYSMD4-206ENST00000479791 BAZ1BQ9UIG0 1483 aaKnown RBP18.94■□□□□ 0.62
LYSMD4-206ENST00000479791 APLP2Q06481 763 aa18.93■□□□□ 0.62
LYSMD4-206ENST00000479791 TSHZ2Q9NRE2 1034 aa18.9■□□□□ 0.62
LYSMD4-206ENST00000479791 ANP32EQ9BTT0 268 aa18.9■□□□□ 0.62
LYSMD4-206ENST00000479791 DHX57Q6P158 1386 aaKnown RBP18.89■□□□□ 0.61
LYSMD4-206ENST00000479791 SYNJ1O43426 1573 aa18.82■□□□□ 0.6
LYSMD4-206ENST00000479791 RAPGEF2Q9Y4G8 1499 aa18.78■□□□□ 0.6
LYSMD4-206ENST00000479791 PEG3Q9GZU2 1588 aa18.72■□□□□ 0.59
LYSMD4-206ENST00000479791 CUX2O14529 1486 aa18.71■□□□□ 0.59
LYSMD4-206ENST00000479791 UNC13AQ9UPW8 1703 aa18.69■□□□□ 0.58
LYSMD4-206ENST00000479791 RRBP1Q9P2E9 1410 aaKnown RBP18.68■□□□□ 0.58
LYSMD4-206ENST00000479791 BCL11AQ9H165 835 aa18.65■□□□□ 0.58
LYSMD4-206ENST00000479791 ERICH3Q5RHP9 1530 aa18.63■□□□□ 0.57
LYSMD4-206ENST00000479791 ARAP1Q96P48 1450 aa18.62■□□□□ 0.57
LYSMD4-206ENST00000479791 KANK4Q5T7N3 995 aaPredicted RBP18.58■□□□□ 0.57
LYSMD4-206ENST00000479791 RANGAP1P46060 587 aaPredicted RBP18.57■□□□□ 0.56
LYSMD4-206ENST00000479791 TOP2BQ02880 1626 aa18.57■□□□□ 0.56
LYSMD4-206ENST00000479791 PRXQ9BXM0 1461 aa18.56■□□□□ 0.56
LYSMD4-206ENST00000479791 KCNH8Q96L42 1107 aa18.55■□□□□ 0.56
LYSMD4-206ENST00000479791 CCNB3Q8WWL7 1395 aa18.55■□□□□ 0.56
LYSMD4-206ENST00000479791 FKBP8Q14318 412 aa18.53■□□□□ 0.56
LYSMD4-206ENST00000479791 BCANQ96GW7 911 aa18.5■□□□□ 0.55
LYSMD4-206ENST00000479791 BIVM-ERCC5R4GMW8 1640 aa18.48■□□□□ 0.55
LYSMD4-206ENST00000479791 MAPKBP1O60336 1514 aa18.48■□□□□ 0.55
LYSMD4-206ENST00000479791 RBM19Q9Y4C8 960 aaKnown RBP18.48■□□□□ 0.55
LYSMD4-206ENST00000479791 NEFLP07196 543 aa18.46■□□□□ 0.55
LYSMD4-206ENST00000479791 ATAD2BQ9ULI0 1458 aa18.45■□□□□ 0.54
LYSMD4-206ENST00000479791 RAB3GAP2Q9H2M9 1393 aa18.44■□□□□ 0.54
LYSMD4-206ENST00000479791 BICRAQ9NZM4 1560 aa18.44■□□□□ 0.54
LYSMD4-206ENST00000479791 CCER2I3L3R5 266 aa18.41■□□□□ 0.54
LYSMD4-206ENST00000479791 PPP1R15AO75807 674 aaPredicted RBP18.4■□□□□ 0.54
LYSMD4-206ENST00000479791 DDX10Q13206 875 aaKnown RBP18.4■□□□□ 0.54
LYSMD4-206ENST00000479791 TIMELESSQ9UNS1 1208 aa18.39■□□□□ 0.53
LYSMD4-206ENST00000479791 WDR97A6NE52 1622 aa18.37■□□□□ 0.53
LYSMD4-206ENST00000479791 SETD5Q9C0A6 1442 aa18.37■□□□□ 0.53
LYSMD4-206ENST00000479791 ARHGAP35Q9NRY4 1499 aa18.36■□□□□ 0.53
LYSMD4-206ENST00000479791 MAP3K1Q13233 1512 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms