RNA–Protein interactions for RNA: ENST00000528975.5

KNL1-206, Transcript of kinetochore scaffold 1, humanhuman

TSL 4

Gene KNL1, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-206ENST00000528975 AEBP2Q6ZN18 517 aaPredicted RBP30.3■■■□□ 2.44
KNL1-206ENST00000528975 CHIC1Q5VXU3 224 aa30.09■■■□□ 2.41
KNL1-206ENST00000528975 NISCHQ9Y2I1 1504 aa26.71■■□□□ 1.87
KNL1-206ENST00000528975 PHF23Q9BUL5 403 aaPredicted RBP26.56■■□□□ 1.84
KNL1-206ENST00000528975 SENP3Q9H4L4 574 aaPredicted RBP25.58■■□□□ 1.69
KNL1-206ENST00000528975 PLPPR3Q6T4P5 718 aa24.66■■□□□ 1.54
KNL1-206ENST00000528975 CCDC180Q9P1Z9 1646 aa23.93■■□□□ 1.42
KNL1-206ENST00000528975 FOXD1Q16676 465 aa23.71■■□□□ 1.39
KNL1-206ENST00000528975 ABCC9O60706 1549 aa23.57■■□□□ 1.36
KNL1-206ENST00000528975 ADRA2BP18089 450 aa23.28■■□□□ 1.32
KNL1-206ENST00000528975 PPP6R1Q9UPN7 881 aa23.27■■□□□ 1.32
KNL1-206ENST00000528975 RB1CC1Q8TDY2 1594 aa22.59■■□□□ 1.21
KNL1-206ENST00000528975 NACADO15069 1562 aa22.5■■□□□ 1.19
KNL1-206ENST00000528975 PIAS4Q8N2W9 510 aaPredicted RBP22.49■■□□□ 1.19
KNL1-206ENST00000528975 DCAF8L2P0C7V8 631 aa22.29■■□□□ 1.16
KNL1-206ENST00000528975 MYO15BQ96JP2 1530 aa22.28■■□□□ 1.16
KNL1-206ENST00000528975 ZCCHC6Q5VYS8 1495 aaKnown RBP22.23■■□□□ 1.15
KNL1-206ENST00000528975 UNC13AQ9UPW8 1703 aa22.15■■□□□ 1.14
KNL1-206ENST00000528975 DCAF1Q9Y4B6 1507 aa22.11■■□□□ 1.13
KNL1-206ENST00000528975 KCNA4P22459 653 aa21.97■■□□□ 1.11
KNL1-206ENST00000528975 BICRAQ9NZM4 1560 aa21.95■■□□□ 1.1
KNL1-206ENST00000528975 PABPN1Q86U42 306 aaKnown RBP eCLIP21.92■■□□□ 1.1
KNL1-206ENST00000528975 PPP4R3CPQ6ZMV5 832 aa21.83■■□□□ 1.09
KNL1-206ENST00000528975 DNAJC5BQ9UF47 199 aa21.8■■□□□ 1.08
KNL1-206ENST00000528975 SCRIBQ14160 1630 aa21.79■■□□□ 1.08
KNL1-206ENST00000528975 SHROOM4Q9ULL8 1493 aa21.67■■□□□ 1.06
KNL1-206ENST00000528975 MSH5O43196 834 aa21.6■■□□□ 1.05
KNL1-206ENST00000528975 NCBP3Q53F19 620 aaKnown RBP21.38■■□□□ 1.01
KNL1-206ENST00000528975 EIF4G1Q04637 1599 aaKnown RBP21.37■■□□□ 1.01
KNL1-206ENST00000528975 CC2D2AQ9P2K1 1620 aa21.34■■□□□ 1.01
KNL1-206ENST00000528975 SCAF1Q9H7N4 1312 aaKnown RBP21.23■□□□□ 0.99
KNL1-206ENST00000528975 CECR2Q9BXF3 1484 aa21.2■□□□□ 0.98
KNL1-206ENST00000528975 NPM3O75607 178 aaKnown RBP21.1■□□□□ 0.97
KNL1-206ENST00000528975 CNKSR2Q8WXI2 1034 aa21.07■□□□□ 0.96
KNL1-206ENST00000528975 EHMT2Q96KQ7 1210 aa21.07■□□□□ 0.96
KNL1-206ENST00000528975 SLC4A1APQ9BWU0 796 aaKnown RBP21■□□□□ 0.95
KNL1-206ENST00000528975 MAPK8IP2Q13387 824 aaPredicted RBP20.97■□□□□ 0.95
KNL1-206ENST00000528975 SMARCA4P51532 1647 aa20.82■□□□□ 0.92
KNL1-206ENST00000528975 BAZ1AQ9NRL2 1556 aaPredicted RBP20.73■□□□□ 0.91
KNL1-206ENST00000528975 NCAPD3P42695 1498 aa20.73■□□□□ 0.91
KNL1-206ENST00000528975 ATAD2BQ9ULI0 1458 aa20.72■□□□□ 0.91
KNL1-206ENST00000528975 SMARCA2P51531 1590 aa20.69■□□□□ 0.9
KNL1-206ENST00000528975 HMGXB3Q12766 1538 aa20.66■□□□□ 0.9
KNL1-206ENST00000528975 PEG3Q9GZU2 1588 aa20.62■□□□□ 0.89
KNL1-206ENST00000528975 MROH2BQ7Z745 1585 aa20.59■□□□□ 0.89
KNL1-206ENST00000528975 CSRNP3Q8WYN3 585 aa20.54■□□□□ 0.88
KNL1-206ENST00000528975 BAZ1BQ9UIG0 1483 aaKnown RBP20.54■□□□□ 0.88
KNL1-206ENST00000528975 RNF216Q9NWF9 866 aaPredicted RBP20.52■□□□□ 0.88
KNL1-206ENST00000528975 DMRT2Q9Y5R5 561 aa20.51■□□□□ 0.87
KNL1-206ENST00000528975 WIZO95785 1651 aa20.38■□□□□ 0.85
KNL1-206ENST00000528975 NESP48681 1621 aa20.34■□□□□ 0.85
KNL1-206ENST00000528975 ERCC6Q03468 1493 aa20.31■□□□□ 0.84
KNL1-206ENST00000528975 HOXD11P31277 338 aaPredicted RBP20.3■□□□□ 0.84
KNL1-206ENST00000528975 LAMC3Q9Y6N6 1575 aa20.26■□□□□ 0.83
KNL1-206ENST00000528975 ZBTB22O15209 634 aa20.24■□□□□ 0.83
KNL1-206ENST00000528975 RSF1Q96T23 1441 aaPredicted RBP20.23■□□□□ 0.83
KNL1-206ENST00000528975 CUX2O14529 1486 aa20.21■□□□□ 0.83
KNL1-206ENST00000528975 KIF21AQ7Z4S6 1674 aa20.16■□□□□ 0.82
KNL1-206ENST00000528975 TOP2AP11388 1531 aaKnown RBP20.15■□□□□ 0.82
KNL1-206ENST00000528975 THOC2Q8NI27 1593 aaKnown RBP20.15■□□□□ 0.82
KNL1-206ENST00000528975 CADPSQ9ULU8 1353 aa20.09■□□□□ 0.81
KNL1-206ENST00000528975 PDS5BQ9NTI5 1447 aa20.08■□□□□ 0.8
KNL1-206ENST00000528975 FOXD4L1Q9NU39 408 aa20.03■□□□□ 0.8
KNL1-206ENST00000528975 CFTRP13569 1480 aa19.95■□□□□ 0.78
KNL1-206ENST00000528975 MRC2Q9UBG0 1479 aa19.93■□□□□ 0.78
KNL1-206ENST00000528975 WDR62O43379 1518 aa19.91■□□□□ 0.78
KNL1-206ENST00000528975 CEP164Q9UPV0 1460 aa19.9■□□□□ 0.78
KNL1-206ENST00000528975 PRDM2Q13029 1718 aa19.9■□□□□ 0.78
KNL1-206ENST00000528975 FANCD2Q9BXW9 1451 aa19.89■□□□□ 0.77
KNL1-206ENST00000528975 CCDC88BA6NC98 1476 aa19.86■□□□□ 0.77
KNL1-206ENST00000528975 SLC4A2P04920 1241 aa19.81■□□□□ 0.76
KNL1-206ENST00000528975 DNAJC5Q9H3Z4 198 aa19.81■□□□□ 0.76
KNL1-206ENST00000528975 URB2Q14146 1524 aaKnown RBP19.73■□□□□ 0.75
KNL1-206ENST00000528975 DCAF8L1A6NGE4 600 aa19.65■□□□□ 0.74
KNL1-206ENST00000528975 TOPBP1Q92547 1522 aa19.56■□□□□ 0.72
KNL1-206ENST00000528975 DNMBPQ6XZF7 1577 aa19.54■□□□□ 0.72
KNL1-206ENST00000528975 ABCC8Q09428 1581 aa19.51■□□□□ 0.71
KNL1-206ENST00000528975 IFT140Q96RY7 1462 aa19.48■□□□□ 0.71
KNL1-206ENST00000528975 MYCNP04198 464 aaPredicted RBP19.47■□□□□ 0.71
KNL1-206ENST00000528975 SUPT5HO00267 1087 aaKnown RBP19.46■□□□□ 0.71
KNL1-206ENST00000528975 ZNF608Q9ULD9 1512 aaPredicted RBP19.44■□□□□ 0.7
KNL1-206ENST00000528975 EIF4G3O43432 1585 aaKnown RBP19.4■□□□□ 0.7
KNL1-206ENST00000528975 TARBP1Q13395 1621 aaKnown RBP19.4■□□□□ 0.7
KNL1-206ENST00000528975 POLA1P09884 1462 aaPredicted RBP19.39■□□□□ 0.69
KNL1-206ENST00000528975 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.38■□□□□ 0.69
KNL1-206ENST00000528975 CUX1P39880 1505 aa19.34■□□□□ 0.69
KNL1-206ENST00000528975 FGD5Q6ZNL6 1462 aa19.3■□□□□ 0.68
KNL1-206ENST00000528975 RAD54L2Q9Y4B4 1467 aa19.28■□□□□ 0.68
KNL1-206ENST00000528975 AQRO60306 1485 aaKnown RBP eCLIP19.26■□□□□ 0.672e-8■□□□□ 8.7
KNL1-206ENST00000528975 SOGA1O94964 1423 aa19.25■□□□□ 0.67
KNL1-206ENST00000528975 ATXN8OSP0DMR3 200 aa19.24■□□□□ 0.67
KNL1-206ENST00000528975 OSCARQ8IYS5 282 aa19.24■□□□□ 0.67
KNL1-206ENST00000528975 WDR97A6NE52 1622 aa19.24■□□□□ 0.67
KNL1-206ENST00000528975 CHD1O14646 1710 aa19.22■□□□□ 0.67
KNL1-206ENST00000528975 TDRD9Q8NDG6 1382 aaKnown RBP19.18■□□□□ 0.66
KNL1-206ENST00000528975 BIVM-ERCC5R4GMW8 1640 aa19.14■□□□□ 0.66
KNL1-206ENST00000528975 TOP2BQ02880 1626 aa19.12■□□□□ 0.65
KNL1-206ENST00000528975 SYNJ1O43426 1573 aa19.12■□□□□ 0.65
KNL1-206ENST00000528975 U3KPZ7 1027 aaPredicted RBP19.12■□□□□ 0.65
KNL1-206ENST00000528975 PBRM1Q86U86 1689 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms