RNA–Protein interactions for RNA: ENST00000475763.5

LSG1-207, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 3

Gene LSG1, Length 590 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-207ENST00000475763 AEBP2Q6ZN18 517 aaPredicted RBP34.18■■■■□ 3.06
LSG1-207ENST00000475763 CHIC1Q5VXU3 224 aa32.58■■■□□ 2.81
LSG1-207ENST00000475763 SENP3Q9H4L4 574 aaPredicted RBP29.03■■■□□ 2.24
LSG1-207ENST00000475763 PHF23Q9BUL5 403 aaPredicted RBP28.73■■■□□ 2.19
LSG1-207ENST00000475763 FOXD1Q16676 465 aa27.1■■□□□ 1.93
LSG1-207ENST00000475763 PLPPR3Q6T4P5 718 aa26.08■■□□□ 1.77
LSG1-207ENST00000475763 NISCHQ9Y2I1 1504 aa25.82■■□□□ 1.72
LSG1-207ENST00000475763 PPP6R1Q9UPN7 881 aa25.52■■□□□ 1.68
LSG1-207ENST00000475763 ADRA2BP18089 450 aa25.45■■□□□ 1.66
LSG1-207ENST00000475763 PIAS4Q8N2W9 510 aaPredicted RBP25.35■■□□□ 1.65
LSG1-207ENST00000475763 MSH5O43196 834 aa25.2■■□□□ 1.62
LSG1-207ENST00000475763 POTEDQ86YR6 584 aa24.36■■□□□ 1.49
LSG1-207ENST00000475763 MAPK8IP2Q13387 824 aaPredicted RBP23.33■■□□□ 1.33
LSG1-207ENST00000475763 SCAF1Q9H7N4 1312 aaKnown RBP23.15■■□□□ 1.3
LSG1-207ENST00000475763 DMRT2Q9Y5R5 561 aa23.07■■□□□ 1.28
LSG1-207ENST00000475763 PPP4R3CPQ6ZMV5 832 aa22.93■■□□□ 1.26
LSG1-207ENST00000475763 CCDC180Q9P1Z9 1646 aa22.69■■□□□ 1.22
LSG1-207ENST00000475763 CNKSR2Q8WXI2 1034 aa22.42■■□□□ 1.18
LSG1-207ENST00000475763 HOXD11P31277 338 aaPredicted RBP22.29■■□□□ 1.16
LSG1-207ENST00000475763 RNF216Q9NWF9 866 aaPredicted RBP22.16■■□□□ 1.14
LSG1-207ENST00000475763 DCAF8L1A6NGE4 600 aa22.15■■□□□ 1.14
LSG1-207ENST00000475763 NCBP3Q53F19 620 aaKnown RBP22.03■■□□□ 1.12
LSG1-207ENST00000475763 NPM3O75607 178 aaKnown RBP21.8■■□□□ 1.08
LSG1-207ENST00000475763 ZCCHC6Q5VYS8 1495 aaKnown RBP21.66■■□□□ 1.06
LSG1-207ENST00000475763 KCNA4P22459 653 aa21.57■■□□□ 1.04
LSG1-207ENST00000475763 RNF39Q9H2S5 420 aa21.56■■□□□ 1.04
LSG1-207ENST00000475763 CACNB1Q02641 598 aaPredicted RBP21.55■■□□□ 1.04
LSG1-207ENST00000475763 DCAF1Q9Y4B6 1507 aa21.45■■□□□ 1.02
LSG1-207ENST00000475763 ABCC9O60706 1549 aa21.44■■□□□ 1.02
LSG1-207ENST00000475763 DNAJC5BQ9UF47 199 aa21.41■■□□□ 1.02
LSG1-207ENST00000475763 MYO15BQ96JP2 1530 aa21.28■■□□□ 1
LSG1-207ENST00000475763 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.24■□□□□ 0.99
LSG1-207ENST00000475763 C1QBPQ07021 282 aaKnown RBP21.22■□□□□ 0.99
LSG1-207ENST00000475763 DCAF8L2P0C7V8 631 aa21.2■□□□□ 0.98
LSG1-207ENST00000475763 NACADO15069 1562 aa21.15■□□□□ 0.98
LSG1-207ENST00000475763 RB1CC1Q8TDY2 1594 aa20.99■□□□□ 0.95
LSG1-207ENST00000475763 U3KPZ7 1027 aaPredicted RBP20.86■□□□□ 0.93
LSG1-207ENST00000475763 SLC4A2P04920 1241 aa20.79■□□□□ 0.92
LSG1-207ENST00000475763 SHROOM4Q9ULL8 1493 aa20.74■□□□□ 0.91
LSG1-207ENST00000475763 SCRIBQ14160 1630 aa20.69■□□□□ 0.9
LSG1-207ENST00000475763 UNC13AQ9UPW8 1703 aa20.53■□□□□ 0.88
LSG1-207ENST00000475763 SPINK5Q9NQ38 1064 aaPredicted RBP20.52■□□□□ 0.88
LSG1-207ENST00000475763 CAPN15O75808 1086 aa20.44■□□□□ 0.86
LSG1-207ENST00000475763 SLC4A1APQ9BWU0 796 aaKnown RBP20.36■□□□□ 0.85
LSG1-207ENST00000475763 BICRAQ9NZM4 1560 aa20.31■□□□□ 0.84
LSG1-207ENST00000475763 DSG3P32926 999 aa20.28■□□□□ 0.84
LSG1-207ENST00000475763 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.22■□□□□ 0.83
LSG1-207ENST00000475763 HNRNPUL2Q1KMD3 747 aaKnown RBP20.22■□□□□ 0.83
LSG1-207ENST00000475763 TRHP20396 242 aaPredicted RBP20.17■□□□□ 0.82
LSG1-207ENST00000475763 APLP2Q06481 763 aa20.17■□□□□ 0.82
LSG1-207ENST00000475763 SAMD1Q6SPF0 538 aaPredicted RBP20.14■□□□□ 0.81
LSG1-207ENST00000475763 PABPN1Q86U42 306 aaKnown RBP eCLIP20.12■□□□□ 0.81
LSG1-207ENST00000475763 MYCNP04198 464 aaPredicted RBP20.11■□□□□ 0.81
LSG1-207ENST00000475763 ZNF219Q9P2Y4 722 aaPredicted RBP20.07■□□□□ 0.8
LSG1-207ENST00000475763 ABCB7O75027 752 aa20.02■□□□□ 0.8
LSG1-207ENST00000475763 FOXD4L1Q9NU39 408 aa20.02■□□□□ 0.8
LSG1-207ENST00000475763 CECR2Q9BXF3 1484 aa19.99■□□□□ 0.79
LSG1-207ENST00000475763 BAZ1AQ9NRL2 1556 aaPredicted RBP19.98■□□□□ 0.79
LSG1-207ENST00000475763 RSF1Q96T23 1441 aaPredicted RBP19.92■□□□□ 0.78
LSG1-207ENST00000475763 SUPT5HO00267 1087 aaKnown RBP19.89■□□□□ 0.77
LSG1-207ENST00000475763 SMARCA4P51532 1647 aa19.89■□□□□ 0.77
LSG1-207ENST00000475763 MROH2BQ7Z745 1585 aa19.88■□□□□ 0.77
LSG1-207ENST00000475763 ZBTB22O15209 634 aa19.86■□□□□ 0.77
LSG1-207ENST00000475763 EIF4G1Q04637 1599 aaKnown RBP19.72■□□□□ 0.75
LSG1-207ENST00000475763 ATF5Q9Y2D1 282 aaPredicted RBP19.72■□□□□ 0.75
LSG1-207ENST00000475763 PEG3Q9GZU2 1588 aa19.71■□□□□ 0.75
LSG1-207ENST00000475763 WIZO95785 1651 aa19.71■□□□□ 0.75
LSG1-207ENST00000475763 POLA2Q14181 598 aa19.66■□□□□ 0.74
LSG1-207ENST00000475763 SMARCA2P51531 1590 aa19.63■□□□□ 0.73
LSG1-207ENST00000475763 ATAD2BQ9ULI0 1458 aa19.59■□□□□ 0.73
LSG1-207ENST00000475763 TOP2AP11388 1531 aaKnown RBP19.57■□□□□ 0.72
LSG1-207ENST00000475763 NCAPD3P42695 1498 aa19.49■□□□□ 0.71
LSG1-207ENST00000475763 HMGXB3Q12766 1538 aa19.47■□□□□ 0.71
LSG1-207ENST00000475763 BAZ1BQ9UIG0 1483 aaKnown RBP19.47■□□□□ 0.71
LSG1-207ENST00000475763 CC2D2AQ9P2K1 1620 aa19.45■□□□□ 0.7
LSG1-207ENST00000475763 ATXN8OSP0DMR3 200 aa19.33■□□□□ 0.68
LSG1-207ENST00000475763 CCDC88BA6NC98 1476 aa19.31■□□□□ 0.68
LSG1-207ENST00000475763 RBM42Q9BTD8 480 aaKnown RBP19.27■□□□□ 0.68
LSG1-207ENST00000475763 ZBTB12Q9Y330 459 aaPredicted RBP19.19■□□□□ 0.66
LSG1-207ENST00000475763 POTEHQ6S545 545 aa19.11■□□□□ 0.65
LSG1-207ENST00000475763 CSRNP3Q8WYN3 585 aa19.1■□□□□ 0.65
LSG1-207ENST00000475763 OSCARQ8IYS5 282 aa19.05■□□□□ 0.64
LSG1-207ENST00000475763 CFTRP13569 1480 aa18.99■□□□□ 0.63
LSG1-207ENST00000475763 EHMT2Q96KQ7 1210 aa18.97■□□□□ 0.63
LSG1-207ENST00000475763 PRDM2Q13029 1718 aa18.95■□□□□ 0.62
LSG1-207ENST00000475763 CADPSQ9ULU8 1353 aa18.94■□□□□ 0.62
LSG1-207ENST00000475763 AKT1S1Q96B36 256 aa18.89■□□□□ 0.61
LSG1-207ENST00000475763 LAMC3Q9Y6N6 1575 aa18.88■□□□□ 0.61
LSG1-207ENST00000475763 FBLN2P98095 1184 aa18.83■□□□□ 0.6
LSG1-207ENST00000475763 CHRDL2Q6WN34 429 aa18.83■□□□□ 0.6
LSG1-207ENST00000475763 MKRN4PQ13434 485 aaPredicted RBP18.81■□□□□ 0.6
LSG1-207ENST00000475763 ABCC8Q09428 1581 aa18.8■□□□□ 0.6
LSG1-207ENST00000475763 TRIM41Q8WV44 630 aa18.79■□□□□ 0.6
LSG1-207ENST00000475763 WRNQ14191 1432 aaPredicted RBP eCLIP18.76■□□□□ 0.59
LSG1-207ENST00000475763 NESP48681 1621 aa18.75■□□□□ 0.59
LSG1-207ENST00000475763 REM2Q8IYK8 340 aaPredicted RBP18.75■□□□□ 0.59
LSG1-207ENST00000475763 FANCD2Q9BXW9 1451 aa18.72■□□□□ 0.59
LSG1-207ENST00000475763 PDS5BQ9NTI5 1447 aa18.71■□□□□ 0.59
LSG1-207ENST00000475763 SYNJ1O43426 1573 aa18.68■□□□□ 0.58
LSG1-207ENST00000475763 TOP2BQ02880 1626 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms