Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 PA2G4P4-201ENST00000473864 1182 ntBASIC8.39□□□□□ -1.07
LMO3Q8TAP4 RN7SL239P-201ENST00000490061 300 ntBASIC8.39□□□□□ -1.07
LMO3Q8TAP4 RPL32P3-203ENST00000506593 498 ntTSL 5 BASIC8.39□□□□□ -1.07
LMO3Q8TAP4 CKMT2-AS1-206ENST00000511495 585 ntTSL 4 BASIC8.39□□□□□ -1.07
LMO3Q8TAP4 LINC01591-202ENST00000522279 1240 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
LMO3Q8TAP4 OSTCP1-202ENST00000522287 1195 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
LMO3Q8TAP4 IGKV2OR22-4-201ENST00000523309 367 ntBASIC8.39□□□□□ -1.07
LMO3Q8TAP4 AP003122.2-201ENST00000527332 486 ntTSL 3 BASIC8.39□□□□□ -1.07
LMO3Q8TAP4 AP006587.2-201ENST00000530696 493 ntBASIC8.39□□□□□ -1.07
LMO3Q8TAP4 AP001636.1-201ENST00000531997 1122 ntBASIC8.39□□□□□ -1.07
LMO3Q8TAP4 AC004672.2-201ENST00000537181 574 ntTSL 2 BASIC8.39□□□□□ -1.07
LMO3Q8TAP4 TSPAN8-203ENST00000546561 1168 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
LMO3Q8TAP4 LINC01922-201ENST00000562582 719 ntBASIC8.39□□□□□ -1.07
LMO3Q8TAP4 FLJ21408-204ENST00000566854 601 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
LMO3Q8TAP4 DARS-AS1-213ENST00000596410 741 ntTSL 5 BASIC8.39□□□□□ -1.07
LMO3Q8TAP4 AC016629.2-201ENST00000597341 199 ntBASIC8.39□□□□□ -1.07
LMO3Q8TAP4 AC005387.1-201ENST00000597837 352 ntTSL 3 BASIC8.39□□□□□ -1.07
LMO3Q8TAP4 AC010320.1-201ENST00000599775 578 ntTSL 3 BASIC8.39□□□□□ -1.07
LMO3Q8TAP4 BCL2L11-224ENST00000639340 243 ntTSL 5 BASIC8.39□□□□□ -1.07
LMO3Q8TAP4 HCCAT5-202ENST00000642127 1029 ntBASIC8.39□□□□□ -1.07
LMO3Q8TAP4 AC067968.1-201ENST00000591793 3766 ntAPPRIS P1 TSL 2 BASIC8.39□□□□□ -1.07
LMO3Q8TAP4 LINC01653-201ENST00000456026 1728 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
LMO3Q8TAP4 PROM1-210ENST00000510224 4006 ntAPPRIS P3 TSL 5 BASIC8.39□□□□□ -1.07
LMO3Q8TAP4 PUM1-204ENST00000373747 5375 ntAPPRIS ALT1 TSL 5 BASIC8.39□□□□□ -1.07
LMO3Q8TAP4 COL6A6-201ENST00000358511 9581 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
LMO3Q8TAP4 PIWIL2-204ENST00000521356 3488 ntTSL 2 BASIC8.39□□□□□ -1.07
LMO3Q8TAP4 OSBPL6-202ENST00000315022 2999 ntTSL 2 BASIC8.39□□□□□ -1.07
LMO3Q8TAP4 CRB1-210ENST00000538660 3397 ntTSL 2 BASIC8.39□□□□□ -1.07
LMO3Q8TAP4 EFHC1-233ENST00000637353 3829 ntTSL 5 BASIC8.39□□□□□ -1.07
LMO3Q8TAP4 SCG3-201ENST00000220478 3315 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
LMO3Q8TAP4 POLR3A-201ENST00000372371 6640 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
LMO3Q8TAP4 BTK-210ENST00000621635 2767 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
LMO3Q8TAP4 CASR-201ENST00000490131 4015 ntTSL 5 BASIC8.38□□□□□ -1.07
LMO3Q8TAP4 TCF4-246ENST00000570287 3163 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
LMO3Q8TAP4 ZBTB40-202ENST00000375647 8685 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
LMO3Q8TAP4 CDYLP1-201ENST00000419017 1458 ntBASIC8.38□□□□□ -1.07
LMO3Q8TAP4 LINC02367-201ENST00000567749 4388 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
LMO3Q8TAP4 C10orf25-201ENST00000625168 3078 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
LMO3Q8TAP4 YAF2-201ENST00000327791 4156 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
LMO3Q8TAP4 TFG-204ENST00000476228 1783 ntAPPRIS ALT1 TSL 1 (best) BASIC8.38□□□□□ -1.07
LMO3Q8TAP4 NACA-216ENST00000550952 2922 ntTSL 2 BASIC8.38□□□□□ -1.07
LMO3Q8TAP4 PARP14-202ENST00000474629 7915 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
LMO3Q8TAP4 VSIG1-202ENST00000415430 3236 ntAPPRIS ALT2 TSL 2 BASIC8.38□□□□□ -1.07
LMO3Q8TAP4 CDV3-209ENST00000515421 1305 ntTSL 3 BASIC8.38□□□□□ -1.07
LMO3Q8TAP4 CASP10-201ENST00000272879 2073 ntTSL 2 BASIC8.38□□□□□ -1.07
LMO3Q8TAP4 MAPK10-290ENST00000641237 2826 ntBASIC8.38□□□□□ -1.07
LMO3Q8TAP4 SNORA10-201ENST00000384084 133 ntBASIC8.38□□□□□ -1.07
LMO3Q8TAP4 AC003087.1-201ENST00000412828 499 ntTSL 3 BASIC8.38□□□□□ -1.07
LMO3Q8TAP4 LINC01424-201ENST00000417820 1031 ntTSL 2 BASIC8.38□□□□□ -1.07
LMO3Q8TAP4 FTH1P5-201ENST00000425761 545 ntBASIC8.38□□□□□ -1.07
LMO3Q8TAP4 KRT18P53-201ENST00000431919 117 ntBASIC8.38□□□□□ -1.07
LMO3Q8TAP4 AL359502.1-201ENST00000437334 692 ntTSL 3 BASIC8.38□□□□□ -1.07
LMO3Q8TAP4 LINC01284-201ENST00000442994 730 ntTSL 5 BASIC8.38□□□□□ -1.07
LMO3Q8TAP4 AC096543.2-201ENST00000449140 859 ntTSL 3 BASIC8.38□□□□□ -1.07
LMO3Q8TAP4 AL590004.3-201ENST00000450255 443 ntTSL 5 BASIC8.38□□□□□ -1.07
LMO3Q8TAP4 NTAN1P2-201ENST00000515730 940 ntBASIC8.38□□□□□ -1.07
LMO3Q8TAP4 AC009630.2-201ENST00000524133 570 ntTSL 5 BASIC8.38□□□□□ -1.07
LMO3Q8TAP4 RAB30-205ENST00000527633 792 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
LMO3Q8TAP4 HTATIP2-207ENST00000532081 774 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
LMO3Q8TAP4 AC078955.1-201ENST00000547123 882 ntTSL 5 BASIC8.38□□□□□ -1.07
LMO3Q8TAP4 AC093334.1-201ENST00000559904 423 ntTSL 3 BASIC8.38□□□□□ -1.07
LMO3Q8TAP4 AC090371.1-201ENST00000580071 558 ntTSL 4 BASIC8.38□□□□□ -1.07
LMO3Q8TAP4 AC026254.4-201ENST00000581118 454 ntTSL 2 BASIC8.38□□□□□ -1.07
LMO3Q8TAP4 AP002856.2-202ENST00000606885 755 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
LMO3Q8TAP4 FAF2-201ENST00000261942 4515 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
LMO3Q8TAP4 RASSF5-209ENST00000636182 3427 ntTSL 5 BASIC8.38□□□□□ -1.07
LMO3Q8TAP4 AC116535.1-201ENST00000499765 2335 ntTSL 2 BASIC8.38□□□□□ -1.07
LMO3Q8TAP4 COX10-AS1-201ENST00000423323 3000 ntTSL 2 BASIC8.38□□□□□ -1.07
LMO3Q8TAP4 LBR-201ENST00000272163 3745 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
LMO3Q8TAP4 TFDP2-224ENST00000499676 9335 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
LMO3Q8TAP4 TMCC3-203ENST00000551457 4361 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
LMO3Q8TAP4 UBE2U-206ENST00000611228 1550 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
LMO3Q8TAP4 YME1L1-201ENST00000326799 3994 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
LMO3Q8TAP4 HKR1-201ENST00000324411 2929 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
LMO3Q8TAP4 LINC01358-207ENST00000634502 2575 ntTSL 5 BASIC8.38□□□□□ -1.07
LMO3Q8TAP4 UPP2-201ENST00000005756 2224 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
LMO3Q8TAP4 ZNF248-208ENST00000611278 4204 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
LMO3Q8TAP4 STX2-203ENST00000392373 2151 ntAPPRIS P4 TSL 5 BASIC8.38□□□□□ -1.07
LMO3Q8TAP4 SALL1P1-201ENST00000438101 3837 ntBASIC8.38□□□□□ -1.07
LMO3Q8TAP4 AP2B1-213ENST00000612116 3483 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
LMO3Q8TAP4 ZNF10-201ENST00000248211 4441 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
LMO3Q8TAP4 LINC02408-201ENST00000400306 1766 ntTSL 2 BASIC8.38□□□□□ -1.07
LMO3Q8TAP4 KIT-201ENST00000288135 5186 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
LMO3Q8TAP4 PTPRT-204ENST00000373190 12559 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
LMO3Q8TAP4 KCNJ15-205ENST00000398930 2914 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
LMO3Q8TAP4 RBM5-AS1-201ENST00000630404 1386 ntBASIC8.37□□□□□ -1.07
LMO3Q8TAP4 PAXIP1-AS2-201ENST00000397551 1692 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
LMO3Q8TAP4 CYP4F30P-203ENST00000438109 2250 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
LMO3Q8TAP4 AC011008.2-201ENST00000624866 3352 ntBASIC8.37□□□□□ -1.07
LMO3Q8TAP4 KCNA2-205ENST00000633222 11877 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
LMO3Q8TAP4 ITK-201ENST00000422843 4528 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
LMO3Q8TAP4 NEDD4L-204ENST00000382850 8251 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
LMO3Q8TAP4 CD101-202ENST00000369470 3324 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
LMO3Q8TAP4 UBE2D3-205ENST00000350435 711 ntTSL 2 BASIC8.37□□□□□ -1.07
LMO3Q8TAP4 TMEM126B-201ENST00000358867 989 ntAPPRIS P3 TSL 2 BASIC8.37□□□□□ -1.07
LMO3Q8TAP4 RNA5SP389-201ENST00000362610 115 ntBASIC8.37□□□□□ -1.07
LMO3Q8TAP4 RNA5SP226-201ENST00000362653 115 ntBASIC8.37□□□□□ -1.07
LMO3Q8TAP4 RNA5SP161-201ENST00000363871 115 ntBASIC8.37□□□□□ -1.07
LMO3Q8TAP4 RNA5SP149-201ENST00000364952 92 ntBASIC8.37□□□□□ -1.07
LMO3Q8TAP4 RPL5P35-201ENST00000398869 816 ntBASIC8.37□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms