RNA–Protein interactions for RNA: ENST00000546561.2

TSPAN8-203, Transcript of tetraspanin 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN8, Length 1,168 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN8-203ENST00000546561 AEBP2Q6ZN18 517 aaPredicted RBP24.88■■□□□ 1.57
TSPAN8-203ENST00000546561 CHIC1Q5VXU3 224 aa23.38■■□□□ 1.33
TSPAN8-203ENST00000546561 SENP3Q9H4L4 574 aaPredicted RBP21.5■■□□□ 1.03
TSPAN8-203ENST00000546561 PHF23Q9BUL5 403 aaPredicted RBP21.03■□□□□ 0.96
TSPAN8-203ENST00000546561 POTEDQ86YR6 584 aa20.27■□□□□ 0.84
TSPAN8-203ENST00000546561 FOXD1Q16676 465 aa20.06■□□□□ 0.8
TSPAN8-203ENST00000546561 MSH5O43196 834 aa19.24■□□□□ 0.67
TSPAN8-203ENST00000546561 PIAS4Q8N2W9 510 aaPredicted RBP18.57■□□□□ 0.56
TSPAN8-203ENST00000546561 PPP6R1Q9UPN7 881 aa18■□□□□ 0.47
TSPAN8-203ENST00000546561 ADRA2BP18089 450 aa17.91■□□□□ 0.46
TSPAN8-203ENST00000546561 NISCHQ9Y2I1 1504 aa17.89■□□□□ 0.45
TSPAN8-203ENST00000546561 PLPPR3Q6T4P5 718 aa17.84■□□□□ 0.45
TSPAN8-203ENST00000546561 CACNB1Q02641 598 aaPredicted RBP17.05■□□□□ 0.32
TSPAN8-203ENST00000546561 DMRT2Q9Y5R5 561 aa16.87■□□□□ 0.29
TSPAN8-203ENST00000546561 MAPK8IP2Q13387 824 aaPredicted RBP16.71■□□□□ 0.27
TSPAN8-203ENST00000546561 SCAF1Q9H7N4 1312 aaKnown RBP16.53■□□□□ 0.24
TSPAN8-203ENST00000546561 RNF39Q9H2S5 420 aa16.27■□□□□ 0.2
TSPAN8-203ENST00000546561 DCAF8L1A6NGE4 600 aa16.25■□□□□ 0.19
TSPAN8-203ENST00000546561 C1QBPQ07021 282 aaKnown RBP16.03■□□□□ 0.16
TSPAN8-203ENST00000546561 HOXD11P31277 338 aaPredicted RBP15.87■□□□□ 0.13
TSPAN8-203ENST00000546561 CCDC180Q9P1Z9 1646 aa15.8■□□□□ 0.12
TSPAN8-203ENST00000546561 POTEHQ6S545 545 aa15.74■□□□□ 0.11
TSPAN8-203ENST00000546561 DNAJC5BQ9UF47 199 aa15.58■□□□□ 0.08
TSPAN8-203ENST00000546561 RNF216Q9NWF9 866 aaPredicted RBP15.53■□□□□ 0.08
TSPAN8-203ENST00000546561 PPP4R3CPQ6ZMV5 832 aa15.47■□□□□ 0.07
TSPAN8-203ENST00000546561 CNKSR2Q8WXI2 1034 aa15.44■□□□□ 0.06
TSPAN8-203ENST00000546561 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.17■□□□□ 0.02
TSPAN8-203ENST00000546561 ZCCHC6Q5VYS8 1495 aaKnown RBP15.03■□□□□ -0
TSPAN8-203ENST00000546561 DSG3P32926 999 aa14.92□□□□□ -0.02
TSPAN8-203ENST00000546561 DCAF1Q9Y4B6 1507 aa14.87□□□□□ -0.03
TSPAN8-203ENST00000546561 ABCC9O60706 1549 aa14.86□□□□□ -0.03
TSPAN8-203ENST00000546561 CAPN15O75808 1086 aa14.82□□□□□ -0.04
TSPAN8-203ENST00000546561 MYO15BQ96JP2 1530 aa14.75□□□□□ -0.05
TSPAN8-203ENST00000546561 SPINK5Q9NQ38 1064 aaPredicted RBP14.73□□□□□ -0.05
TSPAN8-203ENST00000546561 DCAF8L2P0C7V8 631 aa14.7□□□□□ -0.06
TSPAN8-203ENST00000546561 NACADO15069 1562 aa14.68□□□□□ -0.06
TSPAN8-203ENST00000546561 NCBP3Q53F19 620 aaKnown RBP14.68□□□□□ -0.06
TSPAN8-203ENST00000546561 U3KPZ7 1027 aaPredicted RBP14.68□□□□□ -0.06
TSPAN8-203ENST00000546561 RB1CC1Q8TDY2 1594 aa14.6□□□□□ -0.07
TSPAN8-203ENST00000546561 SCRIBQ14160 1630 aa14.4□□□□□ -0.1
TSPAN8-203ENST00000546561 SHROOM4Q9ULL8 1493 aa14.39□□□□□ -0.11
TSPAN8-203ENST00000546561 NPM3O75607 178 aaKnown RBP14.37□□□□□ -0.11
TSPAN8-203ENST00000546561 RBM42Q9BTD8 480 aaKnown RBP14.36□□□□□ -0.11
TSPAN8-203ENST00000546561 CHRDL2Q6WN34 429 aa14.35□□□□□ -0.11
TSPAN8-203ENST00000546561 ABCB7O75027 752 aa14.34□□□□□ -0.11
TSPAN8-203ENST00000546561 TRHP20396 242 aaPredicted RBP14.34□□□□□ -0.11
TSPAN8-203ENST00000546561 ZNF219Q9P2Y4 722 aaPredicted RBP14.34□□□□□ -0.11
TSPAN8-203ENST00000546561 APLP2Q06481 763 aa14.33□□□□□ -0.12
TSPAN8-203ENST00000546561 SP7Q8TDD2 431 aaPredicted RBP14.32□□□□□ -0.12
TSPAN8-203ENST00000546561 UNC13AQ9UPW8 1703 aa14.29□□□□□ -0.12
TSPAN8-203ENST00000546561 KCNA4P22459 653 aa14.27□□□□□ -0.13
TSPAN8-203ENST00000546561 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.07□□□□□ -0.16
TSPAN8-203ENST00000546561 HNRNPUL2Q1KMD3 747 aaKnown RBP14.07□□□□□ -0.16
TSPAN8-203ENST00000546561 BICRAQ9NZM4 1560 aa14.06□□□□□ -0.16
TSPAN8-203ENST00000546561 SLC4A2P04920 1241 aa13.94□□□□□ -0.18
TSPAN8-203ENST00000546561 SAMD1Q6SPF0 538 aaPredicted RBP13.92□□□□□ -0.18
TSPAN8-203ENST00000546561 PABPN1Q86U42 306 aaKnown RBP eCLIP13.91□□□□□ -0.18
TSPAN8-203ENST00000546561 BAZ1AQ9NRL2 1556 aaPredicted RBP13.88□□□□□ -0.19
TSPAN8-203ENST00000546561 SMARCA4P51532 1647 aa13.82□□□□□ -0.2
TSPAN8-203ENST00000546561 CECR2Q9BXF3 1484 aa13.82□□□□□ -0.2
TSPAN8-203ENST00000546561 HAX1O00165 279 aa13.82□□□□□ -0.2
TSPAN8-203ENST00000546561 SUPT5HO00267 1087 aaKnown RBP13.79□□□□□ -0.2
TSPAN8-203ENST00000546561 AKT1S1Q96B36 256 aa13.79□□□□□ -0.2
TSPAN8-203ENST00000546561 RSF1Q96T23 1441 aaPredicted RBP13.78□□□□□ -0.2
TSPAN8-203ENST00000546561 MROH2BQ7Z745 1585 aa13.77□□□□□ -0.21
TSPAN8-203ENST00000546561 PIP4P2Q8N4L2 257 aa13.77□□□□□ -0.21
TSPAN8-203ENST00000546561 POLA2Q14181 598 aa13.73□□□□□ -0.21
TSPAN8-203ENST00000546561 WIZO95785 1651 aa13.69□□□□□ -0.22
TSPAN8-203ENST00000546561 EIF4G1Q04637 1599 aaKnown RBP13.69□□□□□ -0.22
TSPAN8-203ENST00000546561 PEG3Q9GZU2 1588 aa13.67□□□□□ -0.22
TSPAN8-203ENST00000546561 SMARCA2P51531 1590 aa13.65□□□□□ -0.22
TSPAN8-203ENST00000546561 REM2Q8IYK8 340 aaPredicted RBP13.62□□□□□ -0.23
TSPAN8-203ENST00000546561 SLC4A1APQ9BWU0 796 aaKnown RBP13.61□□□□□ -0.23
TSPAN8-203ENST00000546561 TOP2AP11388 1531 aaKnown RBP13.6□□□□□ -0.23
TSPAN8-203ENST00000546561 ATAD2BQ9ULI0 1458 aa13.56□□□□□ -0.24
TSPAN8-203ENST00000546561 FXR2P51116 673 aaKnown RBP eCLIP13.55□□□□□ -0.24
TSPAN8-203ENST00000546561 BAZ1BQ9UIG0 1483 aaKnown RBP13.54□□□□□ -0.24
TSPAN8-203ENST00000546561 HMGXB3Q12766 1538 aa13.54□□□□□ -0.24
TSPAN8-203ENST00000546561 CC2D2AQ9P2K1 1620 aa13.51□□□□□ -0.25
TSPAN8-203ENST00000546561 ZBTB12Q9Y330 459 aaPredicted RBP13.48□□□□□ -0.25
TSPAN8-203ENST00000546561 NCAPD3P42695 1498 aa13.48□□□□□ -0.25
TSPAN8-203ENST00000546561 PITPNM1O00562 1244 aa13.47□□□□□ -0.25
TSPAN8-203ENST00000546561 EVX2Q03828 476 aa13.47□□□□□ -0.25
TSPAN8-203ENST00000546561 LHX8Q68G74 356 aa13.42□□□□□ -0.26
TSPAN8-203ENST00000546561 CCDC88BA6NC98 1476 aa13.37□□□□□ -0.27
TSPAN8-203ENST00000546561 MYCNP04198 464 aaPredicted RBP13.37□□□□□ -0.27
TSPAN8-203ENST00000546561 PLSCR2Q9NRY7 297 aa13.36□□□□□ -0.27
TSPAN8-203ENST00000546561 OSCARQ8IYS5 282 aa13.33□□□□□ -0.28
TSPAN8-203ENST00000546561 PRDM2Q13029 1718 aa13.26□□□□□ -0.29
TSPAN8-203ENST00000546561 GABBR2O75899 941 aa13.18□□□□□ -0.3
TSPAN8-203ENST00000546561 FOXD4L1Q9NU39 408 aa13.17□□□□□ -0.3
TSPAN8-203ENST00000546561 EHMT2Q96KQ7 1210 aa13.16□□□□□ -0.3
TSPAN8-203ENST00000546561 C19orf67A6NJJ6 358 aa13.15□□□□□ -0.3
TSPAN8-203ENST00000546561 CFTRP13569 1480 aa13.15□□□□□ -0.3
TSPAN8-203ENST00000546561 PRKAR2AP13861 404 aaKnown RBP13.14□□□□□ -0.31
TSPAN8-203ENST00000546561 LAMC3Q9Y6N6 1575 aa13.13□□□□□ -0.31
TSPAN8-203ENST00000546561 CADPSQ9ULU8 1353 aa13.11□□□□□ -0.31
TSPAN8-203ENST00000546561 ZBTB22O15209 634 aa13.1□□□□□ -0.31
TSPAN8-203ENST00000546561 ABCC8Q09428 1581 aa13.07□□□□□ -0.32
TSPAN8-203ENST00000546561 TRIM41Q8WV44 630 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms