RNA–Protein interactions for RNA: ENST00000527332.1

AP003122.2-201, humanhuman

TSL 3 BASIC

Gene AP003122.2, Length 486 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003122.2-201ENST00000527332 AEBP2Q6ZN18 517 aaPredicted RBP32.95■■■□□ 2.87
AP003122.2-201ENST00000527332 CHIC1Q5VXU3 224 aa31.13■■■□□ 2.57
AP003122.2-201ENST00000527332 SENP3Q9H4L4 574 aaPredicted RBP28.25■■■□□ 2.11
AP003122.2-201ENST00000527332 PHF23Q9BUL5 403 aaPredicted RBP27.78■■■□□ 2.04
AP003122.2-201ENST00000527332 FOXD1Q16676 465 aa26.28■■□□□ 1.8
AP003122.2-201ENST00000527332 PLPPR3Q6T4P5 718 aa24.8■■□□□ 1.56
AP003122.2-201ENST00000527332 MSH5O43196 834 aa24.78■■□□□ 1.56
AP003122.2-201ENST00000527332 PIAS4Q8N2W9 510 aaPredicted RBP24.54■■□□□ 1.52
AP003122.2-201ENST00000527332 POTEDQ86YR6 584 aa24.52■■□□□ 1.52
AP003122.2-201ENST00000527332 PPP6R1Q9UPN7 881 aa24.34■■□□□ 1.49
AP003122.2-201ENST00000527332 ADRA2BP18089 450 aa24.26■■□□□ 1.47
AP003122.2-201ENST00000527332 DMRT2Q9Y5R5 561 aa22.34■■□□□ 1.17
AP003122.2-201ENST00000527332 MAPK8IP2Q13387 824 aaPredicted RBP22.33■■□□□ 1.17
AP003122.2-201ENST00000527332 SCAF1Q9H7N4 1312 aaKnown RBP22.32■■□□□ 1.16
AP003122.2-201ENST00000527332 PPP4R3CPQ6ZMV5 832 aa21.66■■□□□ 1.06
AP003122.2-201ENST00000527332 HOXD11P31277 338 aaPredicted RBP21.43■■□□□ 1.02
AP003122.2-201ENST00000527332 DCAF8L1A6NGE4 600 aa21.4■■□□□ 1.02
AP003122.2-201ENST00000527332 CACNB1Q02641 598 aaPredicted RBP21.36■■□□□ 1.01
AP003122.2-201ENST00000527332 CNKSR2Q8WXI2 1034 aa21.35■■□□□ 1.01
AP003122.2-201ENST00000527332 NISCHQ9Y2I1 1504 aa21.34■■□□□ 1.01
AP003122.2-201ENST00000527332 RNF216Q9NWF9 866 aaPredicted RBP21.22■□□□□ 0.99
AP003122.2-201ENST00000527332 RNF39Q9H2S5 420 aa21.08■□□□□ 0.97
AP003122.2-201ENST00000527332 NCBP3Q53F19 620 aaKnown RBP20.82■□□□□ 0.92
AP003122.2-201ENST00000527332 DNAJC5BQ9UF47 199 aa20.82■□□□□ 0.92
AP003122.2-201ENST00000527332 C1QBPQ07021 282 aaKnown RBP20.79■□□□□ 0.92
AP003122.2-201ENST00000527332 NPM3O75607 178 aaKnown RBP20.45■□□□□ 0.86
AP003122.2-201ENST00000527332 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.41■□□□□ 0.86
AP003122.2-201ENST00000527332 U3KPZ7 1027 aaPredicted RBP19.94■□□□□ 0.78
AP003122.2-201ENST00000527332 KCNA4P22459 653 aa19.82■□□□□ 0.76
AP003122.2-201ENST00000527332 ABCC9O60706 1549 aa19.71■□□□□ 0.75
AP003122.2-201ENST00000527332 CAPN15O75808 1086 aa19.71■□□□□ 0.75
AP003122.2-201ENST00000527332 SPINK5Q9NQ38 1064 aaPredicted RBP19.69■□□□□ 0.74
AP003122.2-201ENST00000527332 DSG3P32926 999 aa19.64■□□□□ 0.73
AP003122.2-201ENST00000527332 SLC4A2P04920 1241 aa19.57■□□□□ 0.72
AP003122.2-201ENST00000527332 APLP2Q06481 763 aa19.48■□□□□ 0.71
AP003122.2-201ENST00000527332 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.39■□□□□ 0.69
AP003122.2-201ENST00000527332 HNRNPUL2Q1KMD3 747 aaKnown RBP19.39■□□□□ 0.69
AP003122.2-201ENST00000527332 ZNF219Q9P2Y4 722 aaPredicted RBP19.36■□□□□ 0.69
AP003122.2-201ENST00000527332 TRHP20396 242 aaPredicted RBP19.31■□□□□ 0.68
AP003122.2-201ENST00000527332 CCDC180Q9P1Z9 1646 aa19.29■□□□□ 0.68
AP003122.2-201ENST00000527332 SAMD1Q6SPF0 538 aaPredicted RBP19.24■□□□□ 0.67
AP003122.2-201ENST00000527332 ABCB7O75027 752 aa19.2■□□□□ 0.66
AP003122.2-201ENST00000527332 POTEHQ6S545 545 aa19.18■□□□□ 0.66
AP003122.2-201ENST00000527332 MYCNP04198 464 aaPredicted RBP18.98■□□□□ 0.63
AP003122.2-201ENST00000527332 RBM42Q9BTD8 480 aaKnown RBP18.83■□□□□ 0.6
AP003122.2-201ENST00000527332 POLA2Q14181 598 aa18.73■□□□□ 0.59
AP003122.2-201ENST00000527332 SLC4A1APQ9BWU0 796 aaKnown RBP18.71■□□□□ 0.59
AP003122.2-201ENST00000527332 FOXD4L1Q9NU39 408 aa18.64■□□□□ 0.57
AP003122.2-201ENST00000527332 RB1CC1Q8TDY2 1594 aa18.55■□□□□ 0.56
AP003122.2-201ENST00000527332 ZBTB12Q9Y330 459 aaPredicted RBP18.46■□□□□ 0.55
AP003122.2-201ENST00000527332 CHRDL2Q6WN34 429 aa18.45■□□□□ 0.54
AP003122.2-201ENST00000527332 ATF5Q9Y2D1 282 aaPredicted RBP18.45■□□□□ 0.54
AP003122.2-201ENST00000527332 NACADO15069 1562 aa18.33■□□□□ 0.52
AP003122.2-201ENST00000527332 PABPN1Q86U42 306 aaKnown RBP eCLIP18.32■□□□□ 0.52
AP003122.2-201ENST00000527332 AKT1S1Q96B36 256 aa18.31■□□□□ 0.52
AP003122.2-201ENST00000527332 DCAF8L2P0C7V8 631 aa18.23■□□□□ 0.51
AP003122.2-201ENST00000527332 ZBTB22O15209 634 aa18.2■□□□□ 0.5
AP003122.2-201ENST00000527332 OSCARQ8IYS5 282 aa18.17■□□□□ 0.5
AP003122.2-201ENST00000527332 UNC13AQ9UPW8 1703 aa18.15■□□□□ 0.5
AP003122.2-201ENST00000527332 ATXN8OSP0DMR3 200 aa18.13■□□□□ 0.49
AP003122.2-201ENST00000527332 REM2Q8IYK8 340 aaPredicted RBP18.1■□□□□ 0.49
AP003122.2-201ENST00000527332 BICRAQ9NZM4 1560 aa18.04■□□□□ 0.48
AP003122.2-201ENST00000527332 PIP4P2Q8N4L2 257 aa17.95■□□□□ 0.46
AP003122.2-201ENST00000527332 MYO15BQ96JP2 1530 aa17.93■□□□□ 0.46
AP003122.2-201ENST00000527332 PITPNM1O00562 1244 aa17.92■□□□□ 0.46
AP003122.2-201ENST00000527332 SP7Q8TDD2 431 aaPredicted RBP17.88■□□□□ 0.45
AP003122.2-201ENST00000527332 FBLN2P98095 1184 aa17.86■□□□□ 0.45
AP003122.2-201ENST00000527332 SPDYE2BA6NHP3 402 aa17.83■□□□□ 0.44
AP003122.2-201ENST00000527332 SPDYE6P0CI01 402 aa17.83■□□□□ 0.44
AP003122.2-201ENST00000527332 SPDYE2Q495Y8 402 aa17.83■□□□□ 0.44
AP003122.2-201ENST00000527332 FXR2P51116 673 aaKnown RBP eCLIP17.82■□□□□ 0.44
AP003122.2-201ENST00000527332 CECR2Q9BXF3 1484 aa17.79■□□□□ 0.44
AP003122.2-201ENST00000527332 CC2D2AQ9P2K1 1620 aa17.77■□□□□ 0.44
AP003122.2-201ENST00000527332 SHROOM4Q9ULL8 1493 aa17.71■□□□□ 0.43
AP003122.2-201ENST00000527332 HAX1O00165 279 aa17.68■□□□□ 0.42
AP003122.2-201ENST00000527332 EIF4G1Q04637 1599 aaKnown RBP17.63■□□□□ 0.41
AP003122.2-201ENST00000527332 SCRIBQ14160 1630 aa17.61■□□□□ 0.41
AP003122.2-201ENST00000527332 MKRN4PQ13434 485 aaPredicted RBP17.61■□□□□ 0.41
AP003122.2-201ENST00000527332 ZCCHC6Q5VYS8 1495 aaKnown RBP17.61■□□□□ 0.41
AP003122.2-201ENST00000527332 SPDYE1Q8NFV5 336 aaPredicted RBP17.57■□□□□ 0.4
AP003122.2-201ENST00000527332 DCAF1Q9Y4B6 1507 aa17.57■□□□□ 0.4
AP003122.2-201ENST00000527332 SSUH2Q9Y2M2 353 aa17.54■□□□□ 0.4
AP003122.2-201ENST00000527332 ZNF692Q9BU19 519 aaPredicted RBP17.53■□□□□ 0.4
AP003122.2-201ENST00000527332 DNAJC5Q9H3Z4 198 aa17.53■□□□□ 0.4
AP003122.2-201ENST00000527332 CLEC11AQ9Y240 323 aa17.49■□□□□ 0.39
AP003122.2-201ENST00000527332 PRKAR2AP13861 404 aaKnown RBP17.45■□□□□ 0.38
AP003122.2-201ENST00000527332 EVX2Q03828 476 aa17.37■□□□□ 0.37
AP003122.2-201ENST00000527332 C19orf67A6NJJ6 358 aa17.25■□□□□ 0.35
AP003122.2-201ENST00000527332 PRR29P0C7W0 189 aa17.19■□□□□ 0.34
AP003122.2-201ENST00000527332 CHADLQ6NUI6 762 aa17.16■□□□□ 0.34
AP003122.2-201ENST00000527332 CSRNP3Q8WYN3 585 aa17.15■□□□□ 0.34
AP003122.2-201ENST00000527332 CUX2O14529 1486 aa17.1■□□□□ 0.33
AP003122.2-201ENST00000527332 ERCC6Q03468 1493 aa17.04■□□□□ 0.32
AP003122.2-201ENST00000527332 GABBR2O75899 941 aa17.03■□□□□ 0.32
AP003122.2-201ENST00000527332 NCAPD3P42695 1498 aa16.93■□□□□ 0.3
AP003122.2-201ENST00000527332 FARP1Q9Y4F1 1045 aaPredicted RBP16.92■□□□□ 0.3
AP003122.2-201ENST00000527332 CD44P16070 742 aaKnown RBP16.89■□□□□ 0.29
AP003122.2-201ENST00000527332 ATAD2BQ9ULI0 1458 aa16.84■□□□□ 0.29
AP003122.2-201ENST00000527332 NESP48681 1621 aa16.84■□□□□ 0.29
AP003122.2-201ENST00000527332 CLCN6P51797 869 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms