RNA–Protein interactions for RNA: ENST00000642127.1

HCCAT5-202, hepatocellular carcinoma associated transcript 5, humanhuman

BASIC

Gene HCCAT5, Length 1,029 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCCAT5-202ENST00000642127 AEBP2Q6ZN18 517 aaPredicted RBP28.75■■■□□ 2.19
HCCAT5-202ENST00000642127 CHIC1Q5VXU3 224 aa26.83■■□□□ 1.89
HCCAT5-202ENST00000642127 SENP3Q9H4L4 574 aaPredicted RBP24.48■■□□□ 1.51
HCCAT5-202ENST00000642127 PHF23Q9BUL5 403 aaPredicted RBP24.13■■□□□ 1.45
HCCAT5-202ENST00000642127 FOXD1Q16676 465 aa22.93■■□□□ 1.26
HCCAT5-202ENST00000642127 POTEDQ86YR6 584 aa21.81■■□□□ 1.08
HCCAT5-202ENST00000642127 MSH5O43196 834 aa21.54■■□□□ 1.04
HCCAT5-202ENST00000642127 PLPPR3Q6T4P5 718 aa21.51■■□□□ 1.03
HCCAT5-202ENST00000642127 PIAS4Q8N2W9 510 aaPredicted RBP21.27■■□□□ 1
HCCAT5-202ENST00000642127 PPP6R1Q9UPN7 881 aa21.16■□□□□ 0.98
HCCAT5-202ENST00000642127 ADRA2BP18089 450 aa21.03■□□□□ 0.96
HCCAT5-202ENST00000642127 NISCHQ9Y2I1 1504 aa20.38■□□□□ 0.85
HCCAT5-202ENST00000642127 MAPK8IP2Q13387 824 aaPredicted RBP19.46■□□□□ 0.71
HCCAT5-202ENST00000642127 DMRT2Q9Y5R5 561 aa19.38■□□□□ 0.69
HCCAT5-202ENST00000642127 SCAF1Q9H7N4 1312 aaKnown RBP19.11■□□□□ 0.65
HCCAT5-202ENST00000642127 PPP4R3CPQ6ZMV5 832 aa18.95■□□□□ 0.62
HCCAT5-202ENST00000642127 CACNB1Q02641 598 aaPredicted RBP18.74■□□□□ 0.59
HCCAT5-202ENST00000642127 DCAF8L1A6NGE4 600 aa18.53■□□□□ 0.56
HCCAT5-202ENST00000642127 HOXD11P31277 338 aaPredicted RBP18.51■□□□□ 0.55
HCCAT5-202ENST00000642127 ABCC9O60706 1549 aa18.49■□□□□ 0.55
HCCAT5-202ENST00000642127 NCBP3Q53F19 620 aaKnown RBP18.48■□□□□ 0.55
HCCAT5-202ENST00000642127 KCNA4P22459 653 aa18.46■□□□□ 0.55
HCCAT5-202ENST00000642127 CNKSR2Q8WXI2 1034 aa18.42■□□□□ 0.54
HCCAT5-202ENST00000642127 RNF39Q9H2S5 420 aa18.4■□□□□ 0.54
HCCAT5-202ENST00000642127 CCDC180Q9P1Z9 1646 aa18.27■□□□□ 0.52
HCCAT5-202ENST00000642127 RNF216Q9NWF9 866 aaPredicted RBP18.23■□□□□ 0.51
HCCAT5-202ENST00000642127 NPM3O75607 178 aaKnown RBP18.15■□□□□ 0.5
HCCAT5-202ENST00000642127 C1QBPQ07021 282 aaKnown RBP18.06■□□□□ 0.48
HCCAT5-202ENST00000642127 DNAJC5BQ9UF47 199 aa17.93■□□□□ 0.46
HCCAT5-202ENST00000642127 SLC4A1APQ9BWU0 796 aaKnown RBP17.61■□□□□ 0.41
HCCAT5-202ENST00000642127 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.57■□□□□ 0.4
HCCAT5-202ENST00000642127 RB1CC1Q8TDY2 1594 aa17.46■□□□□ 0.39
HCCAT5-202ENST00000642127 DCAF8L2P0C7V8 631 aa17.4■□□□□ 0.38
HCCAT5-202ENST00000642127 NACADO15069 1562 aa17.28■□□□□ 0.36
HCCAT5-202ENST00000642127 U3KPZ7 1027 aaPredicted RBP17.23■□□□□ 0.35
HCCAT5-202ENST00000642127 PABPN1Q86U42 306 aaKnown RBP eCLIP17.22■□□□□ 0.35
HCCAT5-202ENST00000642127 SLC4A2P04920 1241 aa17.12■□□□□ 0.33
HCCAT5-202ENST00000642127 SPINK5Q9NQ38 1064 aaPredicted RBP17.12■□□□□ 0.33
HCCAT5-202ENST00000642127 EHMT2Q96KQ7 1210 aa17.11■□□□□ 0.33
HCCAT5-202ENST00000642127 DSG3P32926 999 aa17.09■□□□□ 0.33
HCCAT5-202ENST00000642127 UNC13AQ9UPW8 1703 aa17.09■□□□□ 0.33
HCCAT5-202ENST00000642127 CAPN15O75808 1086 aa17.02■□□□□ 0.32
HCCAT5-202ENST00000642127 FOXD4L1Q9NU39 408 aa17.01■□□□□ 0.31
HCCAT5-202ENST00000642127 POTEHQ6S545 545 aa16.98■□□□□ 0.31
HCCAT5-202ENST00000642127 BICRAQ9NZM4 1560 aa16.96■□□□□ 0.31
HCCAT5-202ENST00000642127 ZBTB22O15209 634 aa16.94■□□□□ 0.3
HCCAT5-202ENST00000642127 MYO15BQ96JP2 1530 aa16.93■□□□□ 0.3
HCCAT5-202ENST00000642127 ZCCHC6Q5VYS8 1495 aaKnown RBP16.9■□□□□ 0.3
HCCAT5-202ENST00000642127 CSRNP3Q8WYN3 585 aa16.85■□□□□ 0.29
HCCAT5-202ENST00000642127 SCRIBQ14160 1630 aa16.82■□□□□ 0.28
HCCAT5-202ENST00000642127 MYCNP04198 464 aaPredicted RBP16.79■□□□□ 0.28
HCCAT5-202ENST00000642127 DCAF1Q9Y4B6 1507 aa16.73■□□□□ 0.27
HCCAT5-202ENST00000642127 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.69■□□□□ 0.26
HCCAT5-202ENST00000642127 HNRNPUL2Q1KMD3 747 aaKnown RBP16.69■□□□□ 0.26
HCCAT5-202ENST00000642127 TRHP20396 242 aaPredicted RBP16.66■□□□□ 0.26
HCCAT5-202ENST00000642127 ABCB7O75027 752 aa16.64■□□□□ 0.25
HCCAT5-202ENST00000642127 CC2D2AQ9P2K1 1620 aa16.63■□□□□ 0.25
HCCAT5-202ENST00000642127 SAMD1Q6SPF0 538 aaPredicted RBP16.61■□□□□ 0.25
HCCAT5-202ENST00000642127 SHROOM4Q9ULL8 1493 aa16.61■□□□□ 0.25
HCCAT5-202ENST00000642127 CECR2Q9BXF3 1484 aa16.6■□□□□ 0.25
HCCAT5-202ENST00000642127 ZNF219Q9P2Y4 722 aaPredicted RBP16.59■□□□□ 0.25
HCCAT5-202ENST00000642127 EIF4G1Q04637 1599 aaKnown RBP16.57■□□□□ 0.24
HCCAT5-202ENST00000642127 APLP2Q06481 763 aa16.54■□□□□ 0.24
HCCAT5-202ENST00000642127 ATXN8OSP0DMR3 200 aa16.39■□□□□ 0.21
HCCAT5-202ENST00000642127 ATF5Q9Y2D1 282 aaPredicted RBP16.32■□□□□ 0.2
HCCAT5-202ENST00000642127 RBM42Q9BTD8 480 aaKnown RBP16.23■□□□□ 0.19
HCCAT5-202ENST00000642127 POLA2Q14181 598 aa16.14■□□□□ 0.17
HCCAT5-202ENST00000642127 CHRDL2Q6WN34 429 aa16.1■□□□□ 0.17
HCCAT5-202ENST00000642127 ERCC6Q03468 1493 aa15.97■□□□□ 0.15
HCCAT5-202ENST00000642127 ATAD2BQ9ULI0 1458 aa15.95■□□□□ 0.14
HCCAT5-202ENST00000642127 SMARCA4P51532 1647 aa15.94■□□□□ 0.14
HCCAT5-202ENST00000642127 NCAPD3P42695 1498 aa15.94■□□□□ 0.14
HCCAT5-202ENST00000642127 SMARCA2P51531 1590 aa15.88■□□□□ 0.13
HCCAT5-202ENST00000642127 DNAJC5Q9H3Z4 198 aa15.86■□□□□ 0.13
HCCAT5-202ENST00000642127 NESP48681 1621 aa15.86■□□□□ 0.13
HCCAT5-202ENST00000642127 HMGXB3Q12766 1538 aa15.84■□□□□ 0.13
HCCAT5-202ENST00000642127 BAZ1BQ9UIG0 1483 aaKnown RBP15.84■□□□□ 0.13
HCCAT5-202ENST00000642127 BAZ1AQ9NRL2 1556 aaPredicted RBP15.83■□□□□ 0.12
HCCAT5-202ENST00000642127 CUX2O14529 1486 aa15.82■□□□□ 0.12
HCCAT5-202ENST00000642127 AKT1S1Q96B36 256 aa15.8■□□□□ 0.12
HCCAT5-202ENST00000642127 MROH2BQ7Z745 1585 aa15.77■□□□□ 0.11
HCCAT5-202ENST00000642127 ZBTB12Q9Y330 459 aaPredicted RBP15.76■□□□□ 0.11
HCCAT5-202ENST00000642127 FBLN2P98095 1184 aa15.72■□□□□ 0.11
HCCAT5-202ENST00000642127 SP7Q8TDD2 431 aaPredicted RBP15.72■□□□□ 0.11
HCCAT5-202ENST00000642127 PEG3Q9GZU2 1588 aa15.69■□□□□ 0.1
HCCAT5-202ENST00000642127 REM2Q8IYK8 340 aaPredicted RBP15.68■□□□□ 0.1
HCCAT5-202ENST00000642127 OSCARQ8IYS5 282 aa15.66■□□□□ 0.1
HCCAT5-202ENST00000642127 PIP4P2Q8N4L2 257 aa15.65■□□□□ 0.1
HCCAT5-202ENST00000642127 THOC2Q8NI27 1593 aaKnown RBP15.65■□□□□ 0.1
HCCAT5-202ENST00000642127 KIF21AQ7Z4S6 1674 aa15.63■□□□□ 0.09
HCCAT5-202ENST00000642127 LAMC3Q9Y6N6 1575 aa15.62■□□□□ 0.09
HCCAT5-202ENST00000642127 WIZO95785 1651 aa15.6■□□□□ 0.09
HCCAT5-202ENST00000642127 MKRN4PQ13434 485 aaPredicted RBP15.59■□□□□ 0.09
HCCAT5-202ENST00000642127 PDS5BQ9NTI5 1447 aa15.55■□□□□ 0.08
HCCAT5-202ENST00000642127 PITPNM1O00562 1244 aa15.54■□□□□ 0.08
HCCAT5-202ENST00000642127 CADPSQ9ULU8 1353 aa15.49■□□□□ 0.07
HCCAT5-202ENST00000642127 FXR2P51116 673 aaKnown RBP eCLIP15.49■□□□□ 0.07
HCCAT5-202ENST00000642127 MRC2Q9UBG0 1479 aa15.46■□□□□ 0.06
HCCAT5-202ENST00000642127 HAX1O00165 279 aa15.41■□□□□ 0.06
HCCAT5-202ENST00000642127 CEP164Q9UPV0 1460 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 231.1 ms