RNA–Protein interactions for RNA: ENST00000417820.1

LINC01424-201, Transcript of long intergenic non-protein coding RNA 1424, humanhuman

TSL 2 BASIC

Gene LINC01424, Length 1,031 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01424-201ENST00000417820 AEBP2Q6ZN18 517 aaPredicted RBP29.87■■■□□ 2.37
LINC01424-201ENST00000417820 CHIC1Q5VXU3 224 aa28.3■■■□□ 2.12
LINC01424-201ENST00000417820 SENP3Q9H4L4 574 aaPredicted RBP25.64■■□□□ 1.7
LINC01424-201ENST00000417820 PHF23Q9BUL5 403 aaPredicted RBP25.21■■□□□ 1.63
LINC01424-201ENST00000417820 FOXD1Q16676 465 aa23.82■■□□□ 1.4
LINC01424-201ENST00000417820 PLPPR3Q6T4P5 718 aa22.56■■□□□ 1.2
LINC01424-201ENST00000417820 MSH5O43196 834 aa22.48■■□□□ 1.19
LINC01424-201ENST00000417820 PIAS4Q8N2W9 510 aaPredicted RBP22.22■■□□□ 1.15
LINC01424-201ENST00000417820 POTEDQ86YR6 584 aa22.12■■□□□ 1.13
LINC01424-201ENST00000417820 PPP6R1Q9UPN7 881 aa22.09■■□□□ 1.13
LINC01424-201ENST00000417820 ADRA2BP18089 450 aa22■■□□□ 1.11
LINC01424-201ENST00000417820 NISCHQ9Y2I1 1504 aa20.43■□□□□ 0.86
LINC01424-201ENST00000417820 SCAF1Q9H7N4 1312 aaKnown RBP20.31■□□□□ 0.84
LINC01424-201ENST00000417820 DMRT2Q9Y5R5 561 aa20.29■□□□□ 0.84
LINC01424-201ENST00000417820 MAPK8IP2Q13387 824 aaPredicted RBP20.24■□□□□ 0.83
LINC01424-201ENST00000417820 PPP4R3CPQ6ZMV5 832 aa19.7■□□□□ 0.74
LINC01424-201ENST00000417820 HOXD11P31277 338 aaPredicted RBP19.49■□□□□ 0.71
LINC01424-201ENST00000417820 CNKSR2Q8WXI2 1034 aa19.43■□□□□ 0.7
LINC01424-201ENST00000417820 DCAF8L1A6NGE4 600 aa19.33■□□□□ 0.68
LINC01424-201ENST00000417820 CACNB1Q02641 598 aaPredicted RBP19.3■□□□□ 0.68
LINC01424-201ENST00000417820 RNF216Q9NWF9 866 aaPredicted RBP19.3■□□□□ 0.68
LINC01424-201ENST00000417820 RNF39Q9H2S5 420 aa19.11■□□□□ 0.65
LINC01424-201ENST00000417820 DNAJC5BQ9UF47 199 aa19■□□□□ 0.63
LINC01424-201ENST00000417820 NCBP3Q53F19 620 aaKnown RBP18.98■□□□□ 0.63
LINC01424-201ENST00000417820 C1QBPQ07021 282 aaKnown RBP18.89■□□□□ 0.61
LINC01424-201ENST00000417820 NPM3O75607 178 aaKnown RBP18.6■□□□□ 0.57
LINC01424-201ENST00000417820 ABCC9O60706 1549 aa18.51■□□□□ 0.55
LINC01424-201ENST00000417820 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.51■□□□□ 0.55
LINC01424-201ENST00000417820 CCDC180Q9P1Z9 1646 aa18.34■□□□□ 0.53
LINC01424-201ENST00000417820 U3KPZ7 1027 aaPredicted RBP18.08■□□□□ 0.48
LINC01424-201ENST00000417820 KCNA4P22459 653 aa18.04■□□□□ 0.48
LINC01424-201ENST00000417820 CAPN15O75808 1086 aa17.84■□□□□ 0.45
LINC01424-201ENST00000417820 DSG3P32926 999 aa17.82■□□□□ 0.44
LINC01424-201ENST00000417820 SPINK5Q9NQ38 1064 aaPredicted RBP17.82■□□□□ 0.44
LINC01424-201ENST00000417820 SLC4A2P04920 1241 aa17.8■□□□□ 0.44
LINC01424-201ENST00000417820 APLP2Q06481 763 aa17.73■□□□□ 0.43
LINC01424-201ENST00000417820 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.66■□□□□ 0.42
LINC01424-201ENST00000417820 HNRNPUL2Q1KMD3 747 aaKnown RBP17.66■□□□□ 0.42
LINC01424-201ENST00000417820 ZNF219Q9P2Y4 722 aaPredicted RBP17.57■□□□□ 0.4
LINC01424-201ENST00000417820 RB1CC1Q8TDY2 1594 aa17.57■□□□□ 0.4
LINC01424-201ENST00000417820 SAMD1Q6SPF0 538 aaPredicted RBP17.52■□□□□ 0.4
LINC01424-201ENST00000417820 TRHP20396 242 aaPredicted RBP17.49■□□□□ 0.39
LINC01424-201ENST00000417820 DCAF8L2P0C7V8 631 aa17.43■□□□□ 0.38
LINC01424-201ENST00000417820 NACADO15069 1562 aa17.42■□□□□ 0.38
LINC01424-201ENST00000417820 ABCB7O75027 752 aa17.35■□□□□ 0.37
LINC01424-201ENST00000417820 POTEHQ6S545 545 aa17.32■□□□□ 0.36
LINC01424-201ENST00000417820 MYCNP04198 464 aaPredicted RBP17.27■□□□□ 0.36
LINC01424-201ENST00000417820 PABPN1Q86U42 306 aaKnown RBP eCLIP17.26■□□□□ 0.35
LINC01424-201ENST00000417820 MYO15BQ96JP2 1530 aa17.13■□□□□ 0.33
LINC01424-201ENST00000417820 RBM42Q9BTD8 480 aaKnown RBP17.1■□□□□ 0.33
LINC01424-201ENST00000417820 UNC13AQ9UPW8 1703 aa17.04■□□□□ 0.32
LINC01424-201ENST00000417820 SLC4A1APQ9BWU0 796 aaKnown RBP17.04■□□□□ 0.32
LINC01424-201ENST00000417820 POLA2Q14181 598 aa17.01■□□□□ 0.31
LINC01424-201ENST00000417820 BICRAQ9NZM4 1560 aa16.99■□□□□ 0.31
LINC01424-201ENST00000417820 FOXD4L1Q9NU39 408 aa16.98■□□□□ 0.31
LINC01424-201ENST00000417820 ZCCHC6Q5VYS8 1495 aaKnown RBP16.88■□□□□ 0.29
LINC01424-201ENST00000417820 DCAF1Q9Y4B6 1507 aa16.86■□□□□ 0.29
LINC01424-201ENST00000417820 SHROOM4Q9ULL8 1493 aa16.82■□□□□ 0.28
LINC01424-201ENST00000417820 ZBTB12Q9Y330 459 aaPredicted RBP16.8■□□□□ 0.28
LINC01424-201ENST00000417820 ATF5Q9Y2D1 282 aaPredicted RBP16.75■□□□□ 0.27
LINC01424-201ENST00000417820 SCRIBQ14160 1630 aa16.71■□□□□ 0.27
LINC01424-201ENST00000417820 CHRDL2Q6WN34 429 aa16.71■□□□□ 0.27
LINC01424-201ENST00000417820 CECR2Q9BXF3 1484 aa16.7■□□□□ 0.26
LINC01424-201ENST00000417820 CC2D2AQ9P2K1 1620 aa16.68■□□□□ 0.26
LINC01424-201ENST00000417820 AKT1S1Q96B36 256 aa16.65■□□□□ 0.26
LINC01424-201ENST00000417820 EIF4G1Q04637 1599 aaKnown RBP16.62■□□□□ 0.25
LINC01424-201ENST00000417820 ATXN8OSP0DMR3 200 aa16.57■□□□□ 0.24
LINC01424-201ENST00000417820 ZBTB22O15209 634 aa16.55■□□□□ 0.24
LINC01424-201ENST00000417820 OSCARQ8IYS5 282 aa16.44■□□□□ 0.22
LINC01424-201ENST00000417820 REM2Q8IYK8 340 aaPredicted RBP16.42■□□□□ 0.22
LINC01424-201ENST00000417820 PIP4P2Q8N4L2 257 aa16.25■□□□□ 0.19
LINC01424-201ENST00000417820 FBLN2P98095 1184 aa16.24■□□□□ 0.19
LINC01424-201ENST00000417820 SPDYE2BA6NHP3 402 aa16.23■□□□□ 0.19
LINC01424-201ENST00000417820 SPDYE6P0CI01 402 aa16.23■□□□□ 0.19
LINC01424-201ENST00000417820 SPDYE2Q495Y8 402 aa16.23■□□□□ 0.19
LINC01424-201ENST00000417820 PITPNM1O00562 1244 aa16.22■□□□□ 0.19
LINC01424-201ENST00000417820 DNAJC5Q9H3Z4 198 aa16.19■□□□□ 0.18
LINC01424-201ENST00000417820 FXR2P51116 673 aaKnown RBP eCLIP16.18■□□□□ 0.18
LINC01424-201ENST00000417820 SP7Q8TDD2 431 aaPredicted RBP16.18■□□□□ 0.18
LINC01424-201ENST00000417820 NCAPD3P42695 1498 aa16.1■□□□□ 0.17
LINC01424-201ENST00000417820 ERCC6Q03468 1493 aa16.03■□□□□ 0.16
LINC01424-201ENST00000417820 CUX2O14529 1486 aa16.02■□□□□ 0.15
LINC01424-201ENST00000417820 MKRN4PQ13434 485 aaPredicted RBP16.01■□□□□ 0.15
LINC01424-201ENST00000417820 ATAD2BQ9ULI0 1458 aa16.01■□□□□ 0.15
LINC01424-201ENST00000417820 HAX1O00165 279 aa15.99■□□□□ 0.15
LINC01424-201ENST00000417820 SMARCA2P51531 1590 aa15.97■□□□□ 0.15
LINC01424-201ENST00000417820 SPDYE1Q8NFV5 336 aaPredicted RBP15.97■□□□□ 0.15
LINC01424-201ENST00000417820 SSUH2Q9Y2M2 353 aa15.96■□□□□ 0.15
LINC01424-201ENST00000417820 ZNF692Q9BU19 519 aaPredicted RBP15.93■□□□□ 0.14
LINC01424-201ENST00000417820 SMARCA4P51532 1647 aa15.93■□□□□ 0.14
LINC01424-201ENST00000417820 HMGXB3Q12766 1538 aa15.92■□□□□ 0.14
LINC01424-201ENST00000417820 BAZ1AQ9NRL2 1556 aaPredicted RBP15.87■□□□□ 0.13
LINC01424-201ENST00000417820 BAZ1BQ9UIG0 1483 aaKnown RBP15.87■□□□□ 0.13
LINC01424-201ENST00000417820 NESP48681 1621 aa15.84■□□□□ 0.13
LINC01424-201ENST00000417820 CLEC11AQ9Y240 323 aa15.84■□□□□ 0.13
LINC01424-201ENST00000417820 PRKAR2AP13861 404 aaKnown RBP15.81■□□□□ 0.12
LINC01424-201ENST00000417820 PEG3Q9GZU2 1588 aa15.77■□□□□ 0.11
LINC01424-201ENST00000417820 LAMC3Q9Y6N6 1575 aa15.73■□□□□ 0.11
LINC01424-201ENST00000417820 MROH2BQ7Z745 1585 aa15.72■□□□□ 0.11
LINC01424-201ENST00000417820 PDS5BQ9NTI5 1447 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms