RNA–Protein interactions for RNA: ENST00000288135.5

KIT-201, Transcript of KIT proto-oncogene receptor tyrosine kinase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KIT, Length 5,186 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIT-201ENST00000288135 NISCHQ9Y2I1 1504 aa15.98■□□□□ 0.15
KIT-201ENST00000288135 DCAF8L2P0C7V8 631 aa14.97□□□□□ -0.01
KIT-201ENST00000288135 SHROOM4Q9ULL8 1493 aa14.45□□□□□ -0.1
KIT-201ENST00000288135 SUPT5HO00267 1087 aaKnown RBP14.2□□□□□ -0.14
KIT-201ENST00000288135 ABCC9O60706 1549 aa13.65□□□□□ -0.22
KIT-201ENST00000288135 EHMT2Q96KQ7 1210 aa13.53□□□□□ -0.24
KIT-201ENST00000288135 PABPN1Q86U42 306 aaKnown RBP eCLIP13.32□□□□□ -0.28
KIT-201ENST00000288135 CCDC180Q9P1Z9 1646 aa13.32□□□□□ -0.28
KIT-201ENST00000288135 FAM9AQ8IZU1 332 aaPredicted RBP13.31□□□□□ -0.28
KIT-201ENST00000288135 ZCCHC6Q5VYS8 1495 aaKnown RBP13.3□□□□□ -0.28
KIT-201ENST00000288135 SCRIBQ14160 1630 aa13.11□□□□□ -0.31
KIT-201ENST00000288135 TRIM41Q8WV44 630 aa13.08□□□□□ -0.32
KIT-201ENST00000288135 CHIC1Q5VXU3 224 aa13.02□□□□□ -0.32
KIT-201ENST00000288135 RANGAP1P46060 587 aaPredicted RBP12.95□□□□□ -0.34
KIT-201ENST00000288135 TTBK1Q5TCY1 1321 aaPredicted RBP12.94□□□□□ -0.34
KIT-201ENST00000288135 LOC105371045A0A1W2PR82 267 aa12.94□□□□□ -0.34
KIT-201ENST00000288135 PPARGC1BQ86YN6 1023 aaKnown RBP12.8□□□□□ -0.36
KIT-201ENST00000288135 PCGF6Q9BYE7 350 aa12.79□□□□□ -0.36
KIT-201ENST00000288135 RB1CC1Q8TDY2 1594 aa12.74□□□□□ -0.37
KIT-201ENST00000288135 UBTFP17480 764 aaKnown RBP12.73□□□□□ -0.37
KIT-201ENST00000288135 NACADO15069 1562 aa12.72□□□□□ -0.37
KIT-201ENST00000288135 DCAF1Q9Y4B6 1507 aa12.7□□□□□ -0.38
KIT-201ENST00000288135 CECR2Q9BXF3 1484 aa12.7□□□□□ -0.38
KIT-201ENST00000288135 RSF1Q96T23 1441 aaPredicted RBP12.68□□□□□ -0.38
KIT-201ENST00000288135 ATP1B4Q9UN42 357 aaPredicted RBP12.56□□□□□ -0.4
KIT-201ENST00000288135 APLP2Q06481 763 aa12.55□□□□□ -0.4
KIT-201ENST00000288135 MROH2BQ7Z745 1585 aa12.5□□□□□ -0.41
KIT-201ENST00000288135 MYO15BQ96JP2 1530 aa12.48□□□□□ -0.41
KIT-201ENST00000288135 BAZ1AQ9NRL2 1556 aaPredicted RBP12.36□□□□□ -0.43
KIT-201ENST00000288135 WIZO95785 1651 aa12.35□□□□□ -0.43
KIT-201ENST00000288135 CSRNP3Q8WYN3 585 aa12.31□□□□□ -0.44
KIT-201ENST00000288135 BAZ1BQ9UIG0 1483 aaKnown RBP12.31□□□□□ -0.44
KIT-201ENST00000288135 TRIM26Q12899 539 aaPredicted RBP12.3□□□□□ -0.44
KIT-201ENST00000288135 ITGAEP38570 1179 aa12.27□□□□□ -0.44
KIT-201ENST00000288135 CCER1Q8TC90 406 aaPredicted RBP12.27□□□□□ -0.44
KIT-201ENST00000288135 CCDC88BA6NC98 1476 aa12.25□□□□□ -0.45
KIT-201ENST00000288135 P3H3Q8IVL6 736 aa12.24□□□□□ -0.45
KIT-201ENST00000288135 HNRNPUL2Q1KMD3 747 aaKnown RBP12.24□□□□□ -0.45
KIT-201ENST00000288135 FBLN2P98095 1184 aa12.2□□□□□ -0.46
KIT-201ENST00000288135 ABCC8Q09428 1581 aa12.19□□□□□ -0.46
KIT-201ENST00000288135 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.17□□□□□ -0.46
KIT-201ENST00000288135 SMARCA4P51532 1647 aa12.16□□□□□ -0.46
KIT-201ENST00000288135 ARID3CA6NKF2 412 aa12.16□□□□□ -0.46
KIT-201ENST00000288135 WRNQ14191 1432 aaPredicted RBP eCLIP12.15□□□□□ -0.46
KIT-201ENST00000288135 ATAD2BQ9ULI0 1458 aa12.13□□□□□ -0.47
KIT-201ENST00000288135 SOGA1O94964 1423 aa12.13□□□□□ -0.47
KIT-201ENST00000288135 HRCP23327 699 aa12.1□□□□□ -0.47
KIT-201ENST00000288135 TOP2AP11388 1531 aaKnown RBP12.09□□□□□ -0.47
KIT-201ENST00000288135 SMARCA2P51531 1590 aa12.04□□□□□ -0.48
KIT-201ENST00000288135 BICRAQ9NZM4 1560 aa12.04□□□□□ -0.48
KIT-201ENST00000288135 DNAJC5BQ9UF47 199 aa12.02□□□□□ -0.48
KIT-201ENST00000288135 FAM50AQ14320 339 aaKnown RBP12□□□□□ -0.49
KIT-201ENST00000288135 RUSC2Q8N2Y8 1516 aa11.98□□□□□ -0.49
KIT-201ENST00000288135 EIF4G1Q04637 1599 aaKnown RBP11.96□□□□□ -0.49
KIT-201ENST00000288135 UNC13AQ9UPW8 1703 aa11.96□□□□□ -0.49
KIT-201ENST00000288135 ZEB1P37275 1124 aaPredicted RBP11.95□□□□□ -0.5
KIT-201ENST00000288135 CEP162Q5TB80 1403 aa11.94□□□□□ -0.5
KIT-201ENST00000288135 CLIP1P30622 1438 aa11.91□□□□□ -0.5
KIT-201ENST00000288135 CADPSQ9ULU8 1353 aa11.9□□□□□ -0.5
KIT-201ENST00000288135 CUX2O14529 1486 aa11.89□□□□□ -0.51
KIT-201ENST00000288135 KIF27Q86VH2 1401 aa11.88□□□□□ -0.51
KIT-201ENST00000288135 GOLGA3Q08378 1498 aa11.88□□□□□ -0.51
KIT-201ENST00000288135 TDRD9Q8NDG6 1382 aaKnown RBP11.87□□□□□ -0.51
KIT-201ENST00000288135 NCAPD3P42695 1498 aa11.85□□□□□ -0.51
KIT-201ENST00000288135 ERCC6Q03468 1493 aa11.84□□□□□ -0.51
KIT-201ENST00000288135 CHMP7Q8WUX9 453 aaPredicted RBP11.84□□□□□ -0.51
KIT-201ENST00000288135 TNIKQ9UKE5 1360 aa11.84□□□□□ -0.51
KIT-201ENST00000288135 EEA1Q15075 1411 aa11.84□□□□□ -0.51
KIT-201ENST00000288135 MYT1LQ9UL68 1186 aa11.83□□□□□ -0.52
KIT-201ENST00000288135 NESP48681 1621 aa11.82□□□□□ -0.52
KIT-201ENST00000288135 CEP164Q9UPV0 1460 aa11.81□□□□□ -0.52
KIT-201ENST00000288135 CC2D2AQ9P2K1 1620 aa11.81□□□□□ -0.52
KIT-201ENST00000288135 NEUROD1Q13562 356 aa11.8□□□□□ -0.52
KIT-201ENST00000288135 CARMIL1Q5VZK9 1371 aa11.8□□□□□ -0.52
KIT-201ENST00000288135 ZNF777Q9ULD5 760 aaPredicted RBP11.78□□□□□ -0.52
KIT-201ENST00000288135 YTHDC1Q96MU7 727 aaKnown RBP11.78□□□□□ -0.52
KIT-201ENST00000288135 FANCD2Q9BXW9 1451 aa11.78□□□□□ -0.52
KIT-201ENST00000288135 RAPGEF2Q9Y4G8 1499 aa11.77□□□□□ -0.52
KIT-201ENST00000288135 TRIM52Q96A61 297 aa11.75□□□□□ -0.53
KIT-201ENST00000288135 PDS5BQ9NTI5 1447 aa11.75□□□□□ -0.53
KIT-201ENST00000288135 RAD54L2Q9Y4B4 1467 aa11.73□□□□□ -0.53
KIT-201ENST00000288135 CHIC2Q9UKJ5 165 aa11.73□□□□□ -0.53
KIT-201ENST00000288135 SYNJ1O43426 1573 aa11.72□□□□□ -0.53
KIT-201ENST00000288135 KANK4Q5T7N3 995 aaPredicted RBP11.72□□□□□ -0.53
KIT-201ENST00000288135 CNGB1Q14028 1251 aaPredicted RBP11.71□□□□□ -0.54
KIT-201ENST00000288135 CFTRP13569 1480 aa11.68□□□□□ -0.54
KIT-201ENST00000288135 FGD5Q6ZNL6 1462 aa11.68□□□□□ -0.54
KIT-201ENST00000288135 POLR3GLQ9BT43 218 aa11.66□□□□□ -0.54
KIT-201ENST00000288135 MTUS2Q5JR59 1369 aa11.66□□□□□ -0.54
KIT-201ENST00000288135 HMGXB3Q12766 1538 aa11.64□□□□□ -0.55
KIT-201ENST00000288135 IGF1RP08069 1367 aa11.63□□□□□ -0.55
KIT-201ENST00000288135 CUX1P39880 1505 aa11.62□□□□□ -0.55
KIT-201ENST00000288135 KCNH8Q96L42 1107 aa11.61□□□□□ -0.55
KIT-201ENST00000288135 ZNF326Q5BKZ1 582 aaKnown RBP11.6□□□□□ -0.55
KIT-201ENST00000288135 RRP7BPQ9NSQ0 103 aa11.6□□□□□ -0.55
KIT-201ENST00000288135 DIEXFQ68CQ4 756 aaKnown RBP11.6□□□□□ -0.55
KIT-201ENST00000288135 CDK11AQ9UQ88 783 aaPredicted RBP11.59□□□□□ -0.55
KIT-201ENST00000288135 AQRO60306 1485 aaKnown RBP eCLIP11.59□□□□□ -0.55
KIT-201ENST00000288135 VPS8Q8N3P4 1428 aa11.59□□□□□ -0.55
KIT-201ENST00000288135 FHOD3Q2V2M9 1422 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 204 ms