RNA–Protein interactions for RNA: ENST00000611228.4

UBE2U-206, Transcript of ubiquitin conjugating enzyme E2 U, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene UBE2U, Length 1,550 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2U-206ENST00000611228 AEBP2Q6ZN18 517 aaPredicted RBP24.16■■□□□ 1.46
UBE2U-206ENST00000611228 CHIC1Q5VXU3 224 aa23.95■■□□□ 1.43
UBE2U-206ENST00000611228 PHF23Q9BUL5 403 aaPredicted RBP21.11■□□□□ 0.97
UBE2U-206ENST00000611228 NISCHQ9Y2I1 1504 aa20.5■□□□□ 0.87
UBE2U-206ENST00000611228 SENP3Q9H4L4 574 aaPredicted RBP20.39■□□□□ 0.85
UBE2U-206ENST00000611228 PLPPR3Q6T4P5 718 aa19.58■□□□□ 0.73
UBE2U-206ENST00000611228 FOXD1Q16676 465 aa18.89■□□□□ 0.62
UBE2U-206ENST00000611228 CCDC180Q9P1Z9 1646 aa18.51■□□□□ 0.55
UBE2U-206ENST00000611228 PPP6R1Q9UPN7 881 aa18.49■□□□□ 0.55
UBE2U-206ENST00000611228 ADRA2BP18089 450 aa18.47■□□□□ 0.55
UBE2U-206ENST00000611228 ABCC9O60706 1549 aa18.46■□□□□ 0.55
UBE2U-206ENST00000611228 PIAS4Q8N2W9 510 aaPredicted RBP17.9■□□□□ 0.46
UBE2U-206ENST00000611228 RB1CC1Q8TDY2 1594 aa17.62■□□□□ 0.41
UBE2U-206ENST00000611228 NACADO15069 1562 aa17.48■□□□□ 0.39
UBE2U-206ENST00000611228 KCNA4P22459 653 aa17.37■□□□□ 0.37
UBE2U-206ENST00000611228 PPP4R3CPQ6ZMV5 832 aa17.32■□□□□ 0.36
UBE2U-206ENST00000611228 DNAJC5BQ9UF47 199 aa17.31■□□□□ 0.36
UBE2U-206ENST00000611228 MSH5O43196 834 aa17.25■□□□□ 0.35
UBE2U-206ENST00000611228 DCAF8L2P0C7V8 631 aa17.25■□□□□ 0.35
UBE2U-206ENST00000611228 MYO15BQ96JP2 1530 aa17.23■□□□□ 0.35
UBE2U-206ENST00000611228 UNC13AQ9UPW8 1703 aa17.23■□□□□ 0.35
UBE2U-206ENST00000611228 PABPN1Q86U42 306 aaKnown RBP eCLIP17.13■□□□□ 0.33
UBE2U-206ENST00000611228 BICRAQ9NZM4 1560 aa17.06■□□□□ 0.32
UBE2U-206ENST00000611228 ZCCHC6Q5VYS8 1495 aaKnown RBP16.99■□□□□ 0.31
UBE2U-206ENST00000611228 DCAF1Q9Y4B6 1507 aa16.97■□□□□ 0.31
UBE2U-206ENST00000611228 NCBP3Q53F19 620 aaKnown RBP16.94■□□□□ 0.3
UBE2U-206ENST00000611228 SHROOM4Q9ULL8 1493 aa16.92■□□□□ 0.3
UBE2U-206ENST00000611228 SCAF1Q9H7N4 1312 aaKnown RBP16.85■□□□□ 0.29
UBE2U-206ENST00000611228 SCRIBQ14160 1630 aa16.79■□□□□ 0.28
UBE2U-206ENST00000611228 NPM3O75607 178 aaKnown RBP16.74■□□□□ 0.27
UBE2U-206ENST00000611228 CNKSR2Q8WXI2 1034 aa16.74■□□□□ 0.27
UBE2U-206ENST00000611228 CC2D2AQ9P2K1 1620 aa16.71■□□□□ 0.27
UBE2U-206ENST00000611228 EIF4G1Q04637 1599 aaKnown RBP16.67■□□□□ 0.26
UBE2U-206ENST00000611228 CECR2Q9BXF3 1484 aa16.66■□□□□ 0.26
UBE2U-206ENST00000611228 MAPK8IP2Q13387 824 aaPredicted RBP16.64■□□□□ 0.25
UBE2U-206ENST00000611228 SLC4A1APQ9BWU0 796 aaKnown RBP16.59■□□□□ 0.25
UBE2U-206ENST00000611228 EHMT2Q96KQ7 1210 aa16.55■□□□□ 0.24
UBE2U-206ENST00000611228 DMRT2Q9Y5R5 561 aa16.36■□□□□ 0.21
UBE2U-206ENST00000611228 RNF216Q9NWF9 866 aaPredicted RBP16.33■□□□□ 0.2
UBE2U-206ENST00000611228 CSRNP3Q8WYN3 585 aa16.21■□□□□ 0.19
UBE2U-206ENST00000611228 HOXD11P31277 338 aaPredicted RBP16.18■□□□□ 0.18
UBE2U-206ENST00000611228 NCAPD3P42695 1498 aa16.1■□□□□ 0.17
UBE2U-206ENST00000611228 SMARCA2P51531 1590 aa16.04■□□□□ 0.16
UBE2U-206ENST00000611228 SMARCA4P51532 1647 aa16.03■□□□□ 0.16
UBE2U-206ENST00000611228 ATAD2BQ9ULI0 1458 aa16.03■□□□□ 0.16
UBE2U-206ENST00000611228 ZBTB22O15209 634 aa16.03■□□□□ 0.16
UBE2U-206ENST00000611228 HMGXB3Q12766 1538 aa16.02■□□□□ 0.16
UBE2U-206ENST00000611228 DNAJC5Q9H3Z4 198 aa16■□□□□ 0.15
UBE2U-206ENST00000611228 CUX2O14529 1486 aa16■□□□□ 0.15
UBE2U-206ENST00000611228 ERCC6Q03468 1493 aa15.98■□□□□ 0.15
UBE2U-206ENST00000611228 BAZ1AQ9NRL2 1556 aaPredicted RBP15.95■□□□□ 0.14
UBE2U-206ENST00000611228 BAZ1BQ9UIG0 1483 aaKnown RBP15.9■□□□□ 0.14
UBE2U-206ENST00000611228 PEG3Q9GZU2 1588 aa15.89■□□□□ 0.13
UBE2U-206ENST00000611228 FOXD4L1Q9NU39 408 aa15.87■□□□□ 0.13
UBE2U-206ENST00000611228 NESP48681 1621 aa15.83■□□□□ 0.12
UBE2U-206ENST00000611228 LAMC3Q9Y6N6 1575 aa15.79■□□□□ 0.12
UBE2U-206ENST00000611228 MROH2BQ7Z745 1585 aa15.77■□□□□ 0.12
UBE2U-206ENST00000611228 THOC2Q8NI27 1593 aaKnown RBP15.75■□□□□ 0.11
UBE2U-206ENST00000611228 SLC4A2P04920 1241 aa15.73■□□□□ 0.11
UBE2U-206ENST00000611228 KIF21AQ7Z4S6 1674 aa15.69■□□□□ 0.1
UBE2U-206ENST00000611228 PDS5BQ9NTI5 1447 aa15.67■□□□□ 0.1
UBE2U-206ENST00000611228 CADPSQ9ULU8 1353 aa15.6■□□□□ 0.09
UBE2U-206ENST00000611228 WIZO95785 1651 aa15.6■□□□□ 0.09
UBE2U-206ENST00000611228 DCAF8L1A6NGE4 600 aa15.55■□□□□ 0.08
UBE2U-206ENST00000611228 MRC2Q9UBG0 1479 aa15.54■□□□□ 0.08
UBE2U-206ENST00000611228 WDR62O43379 1518 aa15.52■□□□□ 0.07
UBE2U-206ENST00000611228 CEP164Q9UPV0 1460 aa15.47■□□□□ 0.07
UBE2U-206ENST00000611228 MYCNP04198 464 aaPredicted RBP15.45■□□□□ 0.06
UBE2U-206ENST00000611228 FANCD2Q9BXW9 1451 aa15.43■□□□□ 0.06
UBE2U-206ENST00000611228 TOP2AP11388 1531 aaKnown RBP15.42■□□□□ 0.06
UBE2U-206ENST00000611228 RSF1Q96T23 1441 aaPredicted RBP15.42■□□□□ 0.06
UBE2U-206ENST00000611228 CFTRP13569 1480 aa15.42■□□□□ 0.06
UBE2U-206ENST00000611228 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.36■□□□□ 0.05
UBE2U-206ENST00000611228 PRDM2Q13029 1718 aa15.35■□□□□ 0.05
UBE2U-206ENST00000611228 URB2Q14146 1524 aaKnown RBP15.3■□□□□ 0.04
UBE2U-206ENST00000611228 ATXN8OSP0DMR3 200 aa15.28■□□□□ 0.04
UBE2U-206ENST00000611228 TRIM41Q8WV44 630 aa15.25■□□□□ 0.03
UBE2U-206ENST00000611228 U3KPZ7 1027 aaPredicted RBP15.22■□□□□ 0.03
UBE2U-206ENST00000611228 OSCARQ8IYS5 282 aa15.21■□□□□ 0.03
UBE2U-206ENST00000611228 CCDC88BA6NC98 1476 aa15.2■□□□□ 0.02
UBE2U-206ENST00000611228 IFT140Q96RY7 1462 aa15.16■□□□□ 0.02
UBE2U-206ENST00000611228 ABCC8Q09428 1581 aa15.14■□□□□ 0.01
UBE2U-206ENST00000611228 TOPBP1Q92547 1522 aa15.13■□□□□ 0.01
UBE2U-206ENST00000611228 ZNF608Q9ULD9 1512 aaPredicted RBP15.1■□□□□ 0.01
UBE2U-206ENST00000611228 DNMBPQ6XZF7 1577 aa15.1■□□□□ 0.01
UBE2U-206ENST00000611228 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.1■□□□□ 0.01
UBE2U-206ENST00000611228 HNRNPUL2Q1KMD3 747 aaKnown RBP15.1■□□□□ 0.01
UBE2U-206ENST00000611228 SAMD1Q6SPF0 538 aaPredicted RBP15.08■□□□□ 0
UBE2U-206ENST00000611228 EIF4G3O43432 1585 aaKnown RBP15.07■□□□□ 0
UBE2U-206ENST00000611228 RIMBP3CA6NJZ7 1639 aa15.05■□□□□ 0
UBE2U-206ENST00000611228 RIMBP3BA6NNM3 1639 aa15.05■□□□□ 0
UBE2U-206ENST00000611228 RIMBP3Q9UFD9 1639 aa15.05■□□□□ 0
UBE2U-206ENST00000611228 POTEDQ86YR6 584 aa15.05■□□□□ -0
UBE2U-206ENST00000611228 ATF5Q9Y2D1 282 aaPredicted RBP15.02■□□□□ -0
UBE2U-206ENST00000611228 TARBP1Q13395 1621 aaKnown RBP15.02□□□□□ -0.01
UBE2U-206ENST00000611228 ARHGEF11O15085 1522 aa14.99□□□□□ -0.01
UBE2U-206ENST00000611228 CHD1O14646 1710 aa14.98□□□□□ -0.01
UBE2U-206ENST00000611228 POLA1P09884 1462 aaPredicted RBP14.97□□□□□ -0.01
UBE2U-206ENST00000611228 AQRO60306 1485 aaKnown RBP eCLIP14.95□□□□□ -0.02
UBE2U-206ENST00000611228 WDR97A6NE52 1622 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms