Protein–RNA interactions for Protein: Q9Y3Y2

CHTOP, Chromatin target of PRMT1 protein, humanhuman

Known RBP Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOPQ9Y3Y2 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CHTOPQ9Y3Y2 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CHTOPQ9Y3Y2 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
CHTOPQ9Y3Y2 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
CHTOPQ9Y3Y2 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
CHTOPQ9Y3Y2 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CHTOPQ9Y3Y2 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CHTOPQ9Y3Y2 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
CHTOPQ9Y3Y2 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CHTOPQ9Y3Y2 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CHTOPQ9Y3Y2 TCF3P1-201ENST00000423021 1937 ntBASIC14.47□□□□□ -0.09
CHTOPQ9Y3Y2 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC14.47□□□□□ -0.09
CHTOPQ9Y3Y2 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CHTOPQ9Y3Y2 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC14.47□□□□□ -0.09
CHTOPQ9Y3Y2 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC14.47□□□□□ -0.09
CHTOPQ9Y3Y2 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CHTOPQ9Y3Y2 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC14.47□□□□□ -0.09
CHTOPQ9Y3Y2 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC14.47□□□□□ -0.09
CHTOPQ9Y3Y2 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CHTOPQ9Y3Y2 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
CHTOPQ9Y3Y2 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CHTOPQ9Y3Y2 VGF-203ENST00000611537 1622 ntTSL 5 BASIC14.47□□□□□ -0.09
CHTOPQ9Y3Y2 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
CHTOPQ9Y3Y2 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CHTOPQ9Y3Y2 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CHTOPQ9Y3Y2 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
CHTOPQ9Y3Y2 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CHTOPQ9Y3Y2 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CHTOPQ9Y3Y2 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CHTOPQ9Y3Y2 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CHTOPQ9Y3Y2 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CHTOPQ9Y3Y2 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
CHTOPQ9Y3Y2 AP004607.7-201ENST00000527152 1677 ntBASIC14.46□□□□□ -0.09
CHTOPQ9Y3Y2 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
CHTOPQ9Y3Y2 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
CHTOPQ9Y3Y2 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
CHTOPQ9Y3Y2 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CHTOPQ9Y3Y2 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC14.46□□□□□ -0.09
CHTOPQ9Y3Y2 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC14.46□□□□□ -0.09
CHTOPQ9Y3Y2 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CHTOPQ9Y3Y2 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CHTOPQ9Y3Y2 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CHTOPQ9Y3Y2 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC14.46□□□□□ -0.09
CHTOPQ9Y3Y2 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
CHTOPQ9Y3Y2 AC087239.1-201ENST00000622671 572 ntBASIC14.46□□□□□ -0.09
CHTOPQ9Y3Y2 AC068587.7-201ENST00000641602 218 ntBASIC14.46□□□□□ -0.09
CHTOPQ9Y3Y2 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
CHTOPQ9Y3Y2 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CHTOPQ9Y3Y2 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CHTOPQ9Y3Y2 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
CHTOPQ9Y3Y2 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CHTOPQ9Y3Y2 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CHTOPQ9Y3Y2 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CHTOPQ9Y3Y2 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
CHTOPQ9Y3Y2 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.1
CHTOPQ9Y3Y2 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC14.46□□□□□ -0.1
CHTOPQ9Y3Y2 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CHTOPQ9Y3Y2 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CHTOPQ9Y3Y2 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC14.46□□□□□ -0.1
CHTOPQ9Y3Y2 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC14.45□□□□□ -0.1
CHTOPQ9Y3Y2 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CHTOPQ9Y3Y2 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CHTOPQ9Y3Y2 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CHTOPQ9Y3Y2 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC14.45□□□□□ -0.1
CHTOPQ9Y3Y2 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC14.45□□□□□ -0.1
CHTOPQ9Y3Y2 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CHTOPQ9Y3Y2 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CHTOPQ9Y3Y2 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CHTOPQ9Y3Y2 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CHTOPQ9Y3Y2 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CHTOPQ9Y3Y2 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CHTOPQ9Y3Y2 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CHTOPQ9Y3Y2 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CHTOPQ9Y3Y2 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CHTOPQ9Y3Y2 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CHTOPQ9Y3Y2 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CHTOPQ9Y3Y2 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC14.45□□□□□ -0.1
CHTOPQ9Y3Y2 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CHTOPQ9Y3Y2 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CHTOPQ9Y3Y2 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC14.45□□□□□ -0.1
CHTOPQ9Y3Y2 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC14.45□□□□□ -0.1
CHTOPQ9Y3Y2 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CHTOPQ9Y3Y2 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CHTOPQ9Y3Y2 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CHTOPQ9Y3Y2 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC14.45□□□□□ -0.1
CHTOPQ9Y3Y2 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC14.45□□□□□ -0.1
CHTOPQ9Y3Y2 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CHTOPQ9Y3Y2 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CHTOPQ9Y3Y2 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
CHTOPQ9Y3Y2 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC14.45□□□□□ -0.1
CHTOPQ9Y3Y2 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CHTOPQ9Y3Y2 AC141586.5-201ENST00000624546 2050 ntBASIC14.45□□□□□ -0.1
CHTOPQ9Y3Y2 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC14.45□□□□□ -0.1
CHTOPQ9Y3Y2 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CHTOPQ9Y3Y2 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHTOPQ9Y3Y2 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CHTOPQ9Y3Y2 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHTOPQ9Y3Y2 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
CHTOPQ9Y3Y2 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHTOPQ9Y3Y2 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms