Protein–RNA interactions for Protein: Q9Y3B2

EXOSC1, Exosome complex component CSL4, humanhuman

Known RBP Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1Q9Y3B2 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.06■□□□□ 0.48
EXOSC1Q9Y3B2 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC18.06■□□□□ 0.48
EXOSC1Q9Y3B2 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.06■□□□□ 0.48
EXOSC1Q9Y3B2 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC18.06■□□□□ 0.48
EXOSC1Q9Y3B2 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC18.06■□□□□ 0.48
EXOSC1Q9Y3B2 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
EXOSC1Q9Y3B2 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
EXOSC1Q9Y3B2 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
EXOSC1Q9Y3B2 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
EXOSC1Q9Y3B2 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.05■□□□□ 0.48
EXOSC1Q9Y3B2 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
EXOSC1Q9Y3B2 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
EXOSC1Q9Y3B2 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
EXOSC1Q9Y3B2 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
EXOSC1Q9Y3B2 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
EXOSC1Q9Y3B2 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.05■□□□□ 0.48
EXOSC1Q9Y3B2 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
EXOSC1Q9Y3B2 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.05■□□□□ 0.48
EXOSC1Q9Y3B2 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
EXOSC1Q9Y3B2 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.05■□□□□ 0.48
EXOSC1Q9Y3B2 AC131281.2-201ENST00000520478 145 ntBASIC18.05■□□□□ 0.48
EXOSC1Q9Y3B2 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
EXOSC1Q9Y3B2 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
EXOSC1Q9Y3B2 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC18.05■□□□□ 0.48
EXOSC1Q9Y3B2 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
EXOSC1Q9Y3B2 MPST-208ENST00000628507 698 ntTSL 5 BASIC18.05■□□□□ 0.48
EXOSC1Q9Y3B2 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
EXOSC1Q9Y3B2 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
EXOSC1Q9Y3B2 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
EXOSC1Q9Y3B2 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.05■□□□□ 0.48
EXOSC1Q9Y3B2 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
EXOSC1Q9Y3B2 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
EXOSC1Q9Y3B2 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.04■□□□□ 0.48
EXOSC1Q9Y3B2 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
EXOSC1Q9Y3B2 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.04■□□□□ 0.48
EXOSC1Q9Y3B2 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.04■□□□□ 0.48
EXOSC1Q9Y3B2 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
EXOSC1Q9Y3B2 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.04■□□□□ 0.48
EXOSC1Q9Y3B2 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
EXOSC1Q9Y3B2 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
EXOSC1Q9Y3B2 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
EXOSC1Q9Y3B2 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.04■□□□□ 0.48
EXOSC1Q9Y3B2 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
EXOSC1Q9Y3B2 DPP3P2-201ENST00000416030 1696 ntBASIC18.04■□□□□ 0.48
EXOSC1Q9Y3B2 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC18.04■□□□□ 0.48
EXOSC1Q9Y3B2 TRIR-205ENST00000592273 783 ntTSL 3 BASIC18.04■□□□□ 0.48
EXOSC1Q9Y3B2 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
EXOSC1Q9Y3B2 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
EXOSC1Q9Y3B2 AL691432.2-201ENST00000607222 2038 ntBASIC18.04■□□□□ 0.48
EXOSC1Q9Y3B2 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.04■□□□□ 0.48
EXOSC1Q9Y3B2 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
EXOSC1Q9Y3B2 KRT16P2-201ENST00000414673 1423 ntBASIC18.04■□□□□ 0.48
EXOSC1Q9Y3B2 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
EXOSC1Q9Y3B2 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
EXOSC1Q9Y3B2 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
EXOSC1Q9Y3B2 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
EXOSC1Q9Y3B2 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
EXOSC1Q9Y3B2 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
EXOSC1Q9Y3B2 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC18.04■□□□□ 0.48
EXOSC1Q9Y3B2 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
EXOSC1Q9Y3B2 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
EXOSC1Q9Y3B2 TSPY26P-201ENST00000476365 1326 ntBASIC18.03■□□□□ 0.48
EXOSC1Q9Y3B2 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.03■□□□□ 0.48
EXOSC1Q9Y3B2 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
EXOSC1Q9Y3B2 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
EXOSC1Q9Y3B2 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
EXOSC1Q9Y3B2 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
EXOSC1Q9Y3B2 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.03■□□□□ 0.48
EXOSC1Q9Y3B2 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.03■□□□□ 0.48
EXOSC1Q9Y3B2 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
EXOSC1Q9Y3B2 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
EXOSC1Q9Y3B2 AL356441.2-201ENST00000443009 864 ntBASIC18.03■□□□□ 0.48
EXOSC1Q9Y3B2 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
EXOSC1Q9Y3B2 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC18.03■□□□□ 0.48
EXOSC1Q9Y3B2 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
EXOSC1Q9Y3B2 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
EXOSC1Q9Y3B2 BX119927.1-201ENST00000636596 1552 ntBASIC18.03■□□□□ 0.48
EXOSC1Q9Y3B2 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
EXOSC1Q9Y3B2 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
EXOSC1Q9Y3B2 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
EXOSC1Q9Y3B2 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
EXOSC1Q9Y3B2 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.02■□□□□ 0.48
EXOSC1Q9Y3B2 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
EXOSC1Q9Y3B2 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
EXOSC1Q9Y3B2 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC18.02■□□□□ 0.48
EXOSC1Q9Y3B2 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.02■□□□□ 0.48
EXOSC1Q9Y3B2 AC093484.2-201ENST00000580996 2166 ntBASIC18.02■□□□□ 0.48
EXOSC1Q9Y3B2 AC004408.2-201ENST00000623613 2777 ntBASIC18.02■□□□□ 0.48
EXOSC1Q9Y3B2 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
EXOSC1Q9Y3B2 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
EXOSC1Q9Y3B2 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.47
EXOSC1Q9Y3B2 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
EXOSC1Q9Y3B2 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
EXOSC1Q9Y3B2 TREX1-205ENST00000625293 1783 ntBASIC18.02■□□□□ 0.47
EXOSC1Q9Y3B2 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
EXOSC1Q9Y3B2 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
EXOSC1Q9Y3B2 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
EXOSC1Q9Y3B2 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.01■□□□□ 0.47
EXOSC1Q9Y3B2 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
EXOSC1Q9Y3B2 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms