Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NPIPA1Q9UND3 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.62■□□□□ 0.57
NPIPA1Q9UND3 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NPIPA1Q9UND3 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
NPIPA1Q9UND3 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NPIPA1Q9UND3 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NPIPA1Q9UND3 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NPIPA1Q9UND3 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NPIPA1Q9UND3 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
NPIPA1Q9UND3 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.61■□□□□ 0.57
NPIPA1Q9UND3 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.61■□□□□ 0.57
NPIPA1Q9UND3 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NPIPA1Q9UND3 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NPIPA1Q9UND3 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.61■□□□□ 0.57
NPIPA1Q9UND3 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
NPIPA1Q9UND3 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
NPIPA1Q9UND3 PNMA6B-201ENST00000538162 1200 ntBASIC18.61■□□□□ 0.57
NPIPA1Q9UND3 AC008403.3-201ENST00000598924 454 ntBASIC18.61■□□□□ 0.57
NPIPA1Q9UND3 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NPIPA1Q9UND3 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NPIPA1Q9UND3 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NPIPA1Q9UND3 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NPIPA1Q9UND3 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.61■□□□□ 0.57
NPIPA1Q9UND3 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
NPIPA1Q9UND3 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.61■□□□□ 0.57
NPIPA1Q9UND3 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.61■□□□□ 0.57
NPIPA1Q9UND3 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
NPIPA1Q9UND3 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
NPIPA1Q9UND3 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NPIPA1Q9UND3 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NPIPA1Q9UND3 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
NPIPA1Q9UND3 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NPIPA1Q9UND3 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NPIPA1Q9UND3 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
NPIPA1Q9UND3 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.6■□□□□ 0.57
NPIPA1Q9UND3 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18.6■□□□□ 0.57
NPIPA1Q9UND3 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NPIPA1Q9UND3 UNC93B4-201ENST00000505679 747 ntBASIC18.6■□□□□ 0.57
NPIPA1Q9UND3 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.6■□□□□ 0.57
NPIPA1Q9UND3 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NPIPA1Q9UND3 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.6■□□□□ 0.57
NPIPA1Q9UND3 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NPIPA1Q9UND3 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NPIPA1Q9UND3 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.6■□□□□ 0.57
NPIPA1Q9UND3 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
NPIPA1Q9UND3 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
NPIPA1Q9UND3 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NPIPA1Q9UND3 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.6■□□□□ 0.57
NPIPA1Q9UND3 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NPIPA1Q9UND3 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NPIPA1Q9UND3 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NPIPA1Q9UND3 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
NPIPA1Q9UND3 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NPIPA1Q9UND3 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NPIPA1Q9UND3 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC18.59■□□□□ 0.57
NPIPA1Q9UND3 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NPIPA1Q9UND3 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.59■□□□□ 0.57
NPIPA1Q9UND3 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.59■□□□□ 0.57
NPIPA1Q9UND3 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NPIPA1Q9UND3 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NPIPA1Q9UND3 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NPIPA1Q9UND3 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.59■□□□□ 0.57
NPIPA1Q9UND3 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NPIPA1Q9UND3 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NPIPA1Q9UND3 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
NPIPA1Q9UND3 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NPIPA1Q9UND3 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.59■□□□□ 0.57
NPIPA1Q9UND3 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.59■□□□□ 0.57
NPIPA1Q9UND3 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.59■□□□□ 0.57
NPIPA1Q9UND3 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NPIPA1Q9UND3 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.59■□□□□ 0.57
NPIPA1Q9UND3 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.59■□□□□ 0.57
NPIPA1Q9UND3 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.59■□□□□ 0.57
NPIPA1Q9UND3 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.59■□□□□ 0.57
NPIPA1Q9UND3 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NPIPA1Q9UND3 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NPIPA1Q9UND3 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NPIPA1Q9UND3 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
NPIPA1Q9UND3 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NPIPA1Q9UND3 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NPIPA1Q9UND3 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
NPIPA1Q9UND3 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
NPIPA1Q9UND3 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
NPIPA1Q9UND3 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
NPIPA1Q9UND3 AIRN-201ENST00000601203 4374 ntBASIC18.58■□□□□ 0.57
NPIPA1Q9UND3 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
NPIPA1Q9UND3 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
NPIPA1Q9UND3 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.58■□□□□ 0.57
NPIPA1Q9UND3 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
NPIPA1Q9UND3 AC121338.2-201ENST00000622535 1744 ntBASIC18.58■□□□□ 0.57
NPIPA1Q9UND3 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
NPIPA1Q9UND3 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.58■□□□□ 0.57
NPIPA1Q9UND3 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.58■□□□□ 0.57
NPIPA1Q9UND3 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
NPIPA1Q9UND3 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NPIPA1Q9UND3 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NPIPA1Q9UND3 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
NPIPA1Q9UND3 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.58■□□□□ 0.56
NPIPA1Q9UND3 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.58■□□□□ 0.56
NPIPA1Q9UND3 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms