Protein–RNA interactions for Protein: Q9NYF3

FAM53C, Protein FAM53C, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM53CQ9NYF3 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.69■□□□□ 0.9
FAM53CQ9NYF3 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
FAM53CQ9NYF3 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC20.69■□□□□ 0.9
FAM53CQ9NYF3 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FAM53CQ9NYF3 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FAM53CQ9NYF3 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC20.69■□□□□ 0.9
FAM53CQ9NYF3 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
FAM53CQ9NYF3 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
FAM53CQ9NYF3 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.69■□□□□ 0.9
FAM53CQ9NYF3 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FAM53CQ9NYF3 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC20.69■□□□□ 0.9
FAM53CQ9NYF3 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
FAM53CQ9NYF3 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
FAM53CQ9NYF3 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FAM53CQ9NYF3 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC20.69■□□□□ 0.9
FAM53CQ9NYF3 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
FAM53CQ9NYF3 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
FAM53CQ9NYF3 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FAM53CQ9NYF3 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC20.69■□□□□ 0.9
FAM53CQ9NYF3 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FAM53CQ9NYF3 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FAM53CQ9NYF3 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC20.69■□□□□ 0.9
FAM53CQ9NYF3 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC20.69■□□□□ 0.9
FAM53CQ9NYF3 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FAM53CQ9NYF3 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
FAM53CQ9NYF3 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
FAM53CQ9NYF3 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FAM53CQ9NYF3 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
FAM53CQ9NYF3 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
FAM53CQ9NYF3 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
FAM53CQ9NYF3 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.68■□□□□ 0.9
FAM53CQ9NYF3 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.68■□□□□ 0.9
FAM53CQ9NYF3 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FAM53CQ9NYF3 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
FAM53CQ9NYF3 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
FAM53CQ9NYF3 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FAM53CQ9NYF3 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC20.68■□□□□ 0.9
FAM53CQ9NYF3 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FAM53CQ9NYF3 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
FAM53CQ9NYF3 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.67■□□□□ 0.9
FAM53CQ9NYF3 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC20.67■□□□□ 0.9
FAM53CQ9NYF3 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
FAM53CQ9NYF3 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
FAM53CQ9NYF3 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
FAM53CQ9NYF3 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
FAM53CQ9NYF3 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
FAM53CQ9NYF3 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.67■□□□□ 0.9
FAM53CQ9NYF3 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
FAM53CQ9NYF3 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC20.67■□□□□ 0.9
FAM53CQ9NYF3 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
FAM53CQ9NYF3 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC20.67■□□□□ 0.9
FAM53CQ9NYF3 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
FAM53CQ9NYF3 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.67■□□□□ 0.9
FAM53CQ9NYF3 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
FAM53CQ9NYF3 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
FAM53CQ9NYF3 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
FAM53CQ9NYF3 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
FAM53CQ9NYF3 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
FAM53CQ9NYF3 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
FAM53CQ9NYF3 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.66■□□□□ 0.9
FAM53CQ9NYF3 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.66■□□□□ 0.9
FAM53CQ9NYF3 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FAM53CQ9NYF3 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
FAM53CQ9NYF3 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
FAM53CQ9NYF3 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
FAM53CQ9NYF3 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FAM53CQ9NYF3 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
FAM53CQ9NYF3 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC20.66■□□□□ 0.9
FAM53CQ9NYF3 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
FAM53CQ9NYF3 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
FAM53CQ9NYF3 AC055733.4-201ENST00000638462 1354 ntBASIC20.66■□□□□ 0.9
FAM53CQ9NYF3 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
FAM53CQ9NYF3 AC133637.1-201ENST00000624115 1537 ntBASIC20.66■□□□□ 0.9
FAM53CQ9NYF3 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FAM53CQ9NYF3 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC20.66■□□□□ 0.9
FAM53CQ9NYF3 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FAM53CQ9NYF3 AC006333.2-201ENST00000607957 2099 ntBASIC20.66■□□□□ 0.9
FAM53CQ9NYF3 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
FAM53CQ9NYF3 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
FAM53CQ9NYF3 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
FAM53CQ9NYF3 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FAM53CQ9NYF3 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
FAM53CQ9NYF3 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
FAM53CQ9NYF3 WIZP1-201ENST00000531444 2299 ntBASIC20.65■□□□□ 0.9
FAM53CQ9NYF3 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
FAM53CQ9NYF3 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
FAM53CQ9NYF3 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC20.65■□□□□ 0.9
FAM53CQ9NYF3 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC20.65■□□□□ 0.9
FAM53CQ9NYF3 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC20.65■□□□□ 0.9
FAM53CQ9NYF3 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
FAM53CQ9NYF3 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
FAM53CQ9NYF3 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
FAM53CQ9NYF3 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
FAM53CQ9NYF3 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
FAM53CQ9NYF3 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
FAM53CQ9NYF3 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC20.64■□□□□ 0.9
FAM53CQ9NYF3 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
FAM53CQ9NYF3 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC20.64■□□□□ 0.9
FAM53CQ9NYF3 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
FAM53CQ9NYF3 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.64■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms