Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CHD8Q9HCK8 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.02■□□□□ 0.64
CHD8Q9HCK8 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CHD8Q9HCK8 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.02■□□□□ 0.64
CHD8Q9HCK8 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
CHD8Q9HCK8 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
CHD8Q9HCK8 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CHD8Q9HCK8 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CHD8Q9HCK8 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.02■□□□□ 0.64
CHD8Q9HCK8 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
CHD8Q9HCK8 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CHD8Q9HCK8 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CHD8Q9HCK8 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
CHD8Q9HCK8 AC022898.2-201ENST00000616822 1312 ntBASIC19.02■□□□□ 0.63
CHD8Q9HCK8 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.02■□□□□ 0.63
CHD8Q9HCK8 COX11P1-201ENST00000489116 835 ntBASIC19.01■□□□□ 0.63
CHD8Q9HCK8 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHD8Q9HCK8 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CHD8Q9HCK8 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC19.01■□□□□ 0.63
CHD8Q9HCK8 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHD8Q9HCK8 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CHD8Q9HCK8 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHD8Q9HCK8 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CHD8Q9HCK8 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CHD8Q9HCK8 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHD8Q9HCK8 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHD8Q9HCK8 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CHD8Q9HCK8 HMGN1P19-201ENST00000436976 333 ntBASIC19.01■□□□□ 0.63
CHD8Q9HCK8 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.01■□□□□ 0.63
CHD8Q9HCK8 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC19.01■□□□□ 0.63
CHD8Q9HCK8 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC19■□□□□ 0.63
CHD8Q9HCK8 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC19■□□□□ 0.63
CHD8Q9HCK8 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CHD8Q9HCK8 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19■□□□□ 0.63
CHD8Q9HCK8 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
CHD8Q9HCK8 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19■□□□□ 0.63
CHD8Q9HCK8 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CHD8Q9HCK8 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CHD8Q9HCK8 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CHD8Q9HCK8 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19■□□□□ 0.63
CHD8Q9HCK8 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CHD8Q9HCK8 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19■□□□□ 0.63
CHD8Q9HCK8 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
CHD8Q9HCK8 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
CHD8Q9HCK8 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHD8Q9HCK8 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.99■□□□□ 0.63
CHD8Q9HCK8 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18.99■□□□□ 0.63
CHD8Q9HCK8 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.99■□□□□ 0.63
CHD8Q9HCK8 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.99■□□□□ 0.63
CHD8Q9HCK8 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CHD8Q9HCK8 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.99■□□□□ 0.63
CHD8Q9HCK8 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.99■□□□□ 0.63
CHD8Q9HCK8 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHD8Q9HCK8 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHD8Q9HCK8 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
CHD8Q9HCK8 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHD8Q9HCK8 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CHD8Q9HCK8 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHD8Q9HCK8 B3GAT3P1-201ENST00000471720 806 ntBASIC18.99■□□□□ 0.63
CHD8Q9HCK8 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.99■□□□□ 0.63
CHD8Q9HCK8 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
CHD8Q9HCK8 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CHD8Q9HCK8 PRR29-207ENST00000580752 458 ntTSL 3 BASIC18.99■□□□□ 0.63
CHD8Q9HCK8 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.99■□□□□ 0.63
CHD8Q9HCK8 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
CHD8Q9HCK8 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC18.99■□□□□ 0.63
CHD8Q9HCK8 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.99■□□□□ 0.63
CHD8Q9HCK8 ANOS2P-203ENST00000472227 1816 ntBASIC18.99■□□□□ 0.63
CHD8Q9HCK8 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CHD8Q9HCK8 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHD8Q9HCK8 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.98■□□□□ 0.63
CHD8Q9HCK8 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.98■□□□□ 0.63
CHD8Q9HCK8 SDHD-206ENST00000528182 754 ntTSL 3 BASIC18.98■□□□□ 0.63
CHD8Q9HCK8 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.98■□□□□ 0.63
CHD8Q9HCK8 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.98■□□□□ 0.63
CHD8Q9HCK8 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHD8Q9HCK8 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHD8Q9HCK8 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.98■□□□□ 0.63
CHD8Q9HCK8 FAAHP1-202ENST00000446499 1238 ntBASIC18.98■□□□□ 0.63
CHD8Q9HCK8 UNC93B7-201ENST00000509439 705 ntBASIC18.98■□□□□ 0.63
CHD8Q9HCK8 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC18.98■□□□□ 0.63
CHD8Q9HCK8 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CHD8Q9HCK8 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC18.98■□□□□ 0.63
CHD8Q9HCK8 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHD8Q9HCK8 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC18.97■□□□□ 0.63
CHD8Q9HCK8 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.97■□□□□ 0.63
CHD8Q9HCK8 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC18.97■□□□□ 0.63
CHD8Q9HCK8 AL445675.2-201ENST00000620291 557 ntBASIC18.97■□□□□ 0.63
CHD8Q9HCK8 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CHD8Q9HCK8 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.97■□□□□ 0.63
CHD8Q9HCK8 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CHD8Q9HCK8 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CHD8Q9HCK8 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.97■□□□□ 0.63
CHD8Q9HCK8 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.97■□□□□ 0.63
CHD8Q9HCK8 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHD8Q9HCK8 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHD8Q9HCK8 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHD8Q9HCK8 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CHD8Q9HCK8 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.96■□□□□ 0.63
CHD8Q9HCK8 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms