Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
CDT1Q9H211 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CDT1Q9H211 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC21.95■■□□□ 1.1
CDT1Q9H211 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC21.95■■□□□ 1.1
CDT1Q9H211 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC21.95■■□□□ 1.1
CDT1Q9H211 AC008687.6-201ENST00000596318 630 ntBASIC21.95■■□□□ 1.1
CDT1Q9H211 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC21.95■■□□□ 1.1
CDT1Q9H211 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC21.95■■□□□ 1.1
CDT1Q9H211 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CDT1Q9H211 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CDT1Q9H211 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
CDT1Q9H211 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CDT1Q9H211 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC21.95■■□□□ 1.1
CDT1Q9H211 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDT1Q9H211 H19-201ENST00000411754 1788 ntTSL 5 BASIC21.94■■□□□ 1.1
CDT1Q9H211 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC21.94■■□□□ 1.1
CDT1Q9H211 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC21.94■■□□□ 1.1
CDT1Q9H211 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDT1Q9H211 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
CDT1Q9H211 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDT1Q9H211 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21.94■■□□□ 1.1
CDT1Q9H211 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDT1Q9H211 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.94■■□□□ 1.1
CDT1Q9H211 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDT1Q9H211 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC21.94■■□□□ 1.1
CDT1Q9H211 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC21.94■■□□□ 1.1
CDT1Q9H211 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDT1Q9H211 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
CDT1Q9H211 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDT1Q9H211 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.94■■□□□ 1.1
CDT1Q9H211 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDT1Q9H211 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDT1Q9H211 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
CDT1Q9H211 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC21.94■■□□□ 1.1
CDT1Q9H211 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CDT1Q9H211 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC21.94■■□□□ 1.1
CDT1Q9H211 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDT1Q9H211 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC21.94■■□□□ 1.1
CDT1Q9H211 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CDT1Q9H211 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CDT1Q9H211 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CDT1Q9H211 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CDT1Q9H211 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.93■■□□□ 1.1
CDT1Q9H211 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
CDT1Q9H211 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
CDT1Q9H211 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CDT1Q9H211 RER1-204ENST00000378518 522 ntTSL 3 BASIC21.93■■□□□ 1.1
CDT1Q9H211 CLDN5-201ENST00000403084 2357 ntBASIC21.93■■□□□ 1.1
CDT1Q9H211 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
CDT1Q9H211 AL390719.1-204ENST00000412397 1219 ntBASIC21.93■■□□□ 1.1
CDT1Q9H211 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC21.93■■□□□ 1.1
CDT1Q9H211 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC21.93■■□□□ 1.1
CDT1Q9H211 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC21.93■■□□□ 1.1
CDT1Q9H211 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC21.93■■□□□ 1.1
CDT1Q9H211 AC233263.1-201ENST00000578059 224 ntBASIC21.93■■□□□ 1.1
CDT1Q9H211 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC21.93■■□□□ 1.1
CDT1Q9H211 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CDT1Q9H211 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDT1Q9H211 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDT1Q9H211 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC21.92■■□□□ 1.1
CDT1Q9H211 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC21.92■■□□□ 1.1
CDT1Q9H211 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDT1Q9H211 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDT1Q9H211 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC21.92■■□□□ 1.1
CDT1Q9H211 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
CDT1Q9H211 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDT1Q9H211 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDT1Q9H211 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDT1Q9H211 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
CDT1Q9H211 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC21.92■■□□□ 1.1
CDT1Q9H211 AC098590.1-201ENST00000468126 897 ntBASIC21.92■■□□□ 1.1
CDT1Q9H211 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
CDT1Q9H211 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CDT1Q9H211 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDT1Q9H211 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDT1Q9H211 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDT1Q9H211 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDT1Q9H211 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.92■■□□□ 1.1
CDT1Q9H211 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDT1Q9H211 AC092720.2-201ENST00000602388 1665 ntBASIC21.91■■□□□ 1.1
CDT1Q9H211 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC21.91■■□□□ 1.1
CDT1Q9H211 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CDT1Q9H211 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CDT1Q9H211 POM121L13P-201ENST00000422362 380 ntBASIC21.91■■□□□ 1.1
CDT1Q9H211 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC21.91■■□□□ 1.1
CDT1Q9H211 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC21.91■■□□□ 1.1
CDT1Q9H211 HES2-206ENST00000489730 730 ntTSL 2 BASIC21.91■■□□□ 1.1
CDT1Q9H211 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDT1Q9H211 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC21.91■■□□□ 1.1
CDT1Q9H211 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC21.91■■□□□ 1.1
CDT1Q9H211 MMD2-204ENST00000612910 778 ntTSL 5 BASIC21.91■■□□□ 1.1
CDT1Q9H211 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.91■■□□□ 1.1
CDT1Q9H211 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC21.91■■□□□ 1.1
CDT1Q9H211 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC21.91■■□□□ 1.1
CDT1Q9H211 DPP3P2-201ENST00000416030 1696 ntBASIC21.91■■□□□ 1.1
CDT1Q9H211 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDT1Q9H211 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC21.91■■□□□ 1.1
CDT1Q9H211 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDT1Q9H211 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CDT1Q9H211 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms