Protein–RNA interactions for Protein: Q96M98

PACRG, Parkin coregulated gene protein, humanhuman

Predicted RBP Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACRGQ96M98 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
PACRGQ96M98 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
PACRGQ96M98 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.05
PACRGQ96M98 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
PACRGQ96M98 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.05
PACRGQ96M98 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
PACRGQ96M98 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PACRGQ96M98 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
PACRGQ96M98 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
PACRGQ96M98 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC15.33■□□□□ 0.04
PACRGQ96M98 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
PACRGQ96M98 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC15.33■□□□□ 0.04
PACRGQ96M98 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
PACRGQ96M98 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
PACRGQ96M98 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PACRGQ96M98 AC093484.2-201ENST00000580996 2166 ntBASIC15.33■□□□□ 0.04
PACRGQ96M98 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC15.33■□□□□ 0.04
PACRGQ96M98 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PACRGQ96M98 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PACRGQ96M98 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
PACRGQ96M98 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
PACRGQ96M98 COMP-202ENST00000425807 2292 ntTSL 2 BASIC15.33■□□□□ 0.04
PACRGQ96M98 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
PACRGQ96M98 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PACRGQ96M98 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PACRGQ96M98 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PACRGQ96M98 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PACRGQ96M98 HTR7P1-202ENST00000624664 4411 ntBASIC15.33■□□□□ 0.04
PACRGQ96M98 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PACRGQ96M98 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC15.33■□□□□ 0.04
PACRGQ96M98 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
PACRGQ96M98 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC15.33■□□□□ 0.04
PACRGQ96M98 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PACRGQ96M98 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PACRGQ96M98 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PACRGQ96M98 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PACRGQ96M98 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PACRGQ96M98 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC15.32■□□□□ 0.04
PACRGQ96M98 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PACRGQ96M98 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PACRGQ96M98 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PACRGQ96M98 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC15.32■□□□□ 0.04
PACRGQ96M98 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PACRGQ96M98 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PACRGQ96M98 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PACRGQ96M98 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PACRGQ96M98 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
PACRGQ96M98 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PACRGQ96M98 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PACRGQ96M98 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC15.32■□□□□ 0.04
PACRGQ96M98 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC15.32■□□□□ 0.04
PACRGQ96M98 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PACRGQ96M98 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PACRGQ96M98 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PACRGQ96M98 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PACRGQ96M98 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC15.31■□□□□ 0.04
PACRGQ96M98 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC15.31■□□□□ 0.04
PACRGQ96M98 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
PACRGQ96M98 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PACRGQ96M98 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PACRGQ96M98 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PACRGQ96M98 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
PACRGQ96M98 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PACRGQ96M98 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PACRGQ96M98 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
PACRGQ96M98 AC135050.7-201ENST00000624508 2218 ntBASIC15.31■□□□□ 0.04
PACRGQ96M98 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC15.31■□□□□ 0.04
PACRGQ96M98 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PACRGQ96M98 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
PACRGQ96M98 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC15.31■□□□□ 0.04
PACRGQ96M98 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PACRGQ96M98 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PACRGQ96M98 RPS2-202ENST00000526522 924 ntTSL 2 BASIC15.31■□□□□ 0.04
PACRGQ96M98 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC15.31■□□□□ 0.04
PACRGQ96M98 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PACRGQ96M98 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PACRGQ96M98 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PACRGQ96M98 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PACRGQ96M98 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
PACRGQ96M98 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PACRGQ96M98 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC15.31■□□□□ 0.04
PACRGQ96M98 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PACRGQ96M98 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
PACRGQ96M98 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
PACRGQ96M98 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC15.31■□□□□ 0.04
PACRGQ96M98 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC15.31■□□□□ 0.04
PACRGQ96M98 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
PACRGQ96M98 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PACRGQ96M98 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PACRGQ96M98 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PACRGQ96M98 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PACRGQ96M98 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PACRGQ96M98 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC15.3■□□□□ 0.04
PACRGQ96M98 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC15.3■□□□□ 0.04
PACRGQ96M98 POLI-202ENST00000406285 2030 ntTSL 2 BASIC15.3■□□□□ 0.04
PACRGQ96M98 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PACRGQ96M98 GPX1-201ENST00000419349 1106 ntBASIC15.3■□□□□ 0.04
PACRGQ96M98 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PACRGQ96M98 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
PACRGQ96M98 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms