Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.44■□□□□ 0.7
UBE2E3Q969T4 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBE2E3Q969T4 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
UBE2E3Q969T4 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBE2E3Q969T4 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBE2E3Q969T4 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBE2E3Q969T4 AC026185.1-201ENST00000445748 174 ntBASIC19.44■□□□□ 0.7
UBE2E3Q969T4 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.44■□□□□ 0.7
UBE2E3Q969T4 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.44■□□□□ 0.7
UBE2E3Q969T4 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
UBE2E3Q969T4 AC133552.2-202ENST00000575694 574 ntBASIC19.44■□□□□ 0.7
UBE2E3Q969T4 AC105020.6-201ENST00000621523 1217 ntBASIC19.44■□□□□ 0.7
UBE2E3Q969T4 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
UBE2E3Q969T4 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
UBE2E3Q969T4 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.44■□□□□ 0.7
UBE2E3Q969T4 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBE2E3Q969T4 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
UBE2E3Q969T4 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBE2E3Q969T4 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBE2E3Q969T4 AL512408.1-201ENST00000569378 2000 ntBASIC19.44■□□□□ 0.7
UBE2E3Q969T4 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
UBE2E3Q969T4 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.44■□□□□ 0.7
UBE2E3Q969T4 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
UBE2E3Q969T4 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBE2E3Q969T4 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBE2E3Q969T4 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.43■□□□□ 0.7
UBE2E3Q969T4 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.43■□□□□ 0.7
UBE2E3Q969T4 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
UBE2E3Q969T4 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBE2E3Q969T4 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBE2E3Q969T4 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.43■□□□□ 0.7
UBE2E3Q969T4 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.43■□□□□ 0.7
UBE2E3Q969T4 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBE2E3Q969T4 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBE2E3Q969T4 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.43■□□□□ 0.7
UBE2E3Q969T4 AL589743.5-201ENST00000616611 1050 ntBASIC19.43■□□□□ 0.7
UBE2E3Q969T4 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
UBE2E3Q969T4 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.43■□□□□ 0.7
UBE2E3Q969T4 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.43■□□□□ 0.7
UBE2E3Q969T4 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBE2E3Q969T4 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.43■□□□□ 0.7
UBE2E3Q969T4 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBE2E3Q969T4 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
UBE2E3Q969T4 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
UBE2E3Q969T4 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
UBE2E3Q969T4 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBE2E3Q969T4 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
UBE2E3Q969T4 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBE2E3Q969T4 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
UBE2E3Q969T4 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
UBE2E3Q969T4 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBE2E3Q969T4 DPP3P2-201ENST00000416030 1696 ntBASIC19.43■□□□□ 0.7
UBE2E3Q969T4 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.43■□□□□ 0.7
UBE2E3Q969T4 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
UBE2E3Q969T4 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBE2E3Q969T4 AC010980.2-201ENST00000587099 1412 ntBASIC19.42■□□□□ 0.7
UBE2E3Q969T4 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
UBE2E3Q969T4 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
UBE2E3Q969T4 AIRN-201ENST00000601203 4374 ntBASIC19.42■□□□□ 0.7
UBE2E3Q969T4 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBE2E3Q969T4 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBE2E3Q969T4 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBE2E3Q969T4 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.42■□□□□ 0.7
UBE2E3Q969T4 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.42■□□□□ 0.7
UBE2E3Q969T4 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.42■□□□□ 0.7
UBE2E3Q969T4 CDCA4P2-201ENST00000441182 718 ntBASIC19.42■□□□□ 0.7
UBE2E3Q969T4 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.42■□□□□ 0.7
UBE2E3Q969T4 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBE2E3Q969T4 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBE2E3Q969T4 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBE2E3Q969T4 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
UBE2E3Q969T4 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
UBE2E3Q969T4 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBE2E3Q969T4 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBE2E3Q969T4 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.41■□□□□ 0.7
UBE2E3Q969T4 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBE2E3Q969T4 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
UBE2E3Q969T4 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBE2E3Q969T4 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.41■□□□□ 0.7
UBE2E3Q969T4 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
UBE2E3Q969T4 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.41■□□□□ 0.7
UBE2E3Q969T4 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC19.41■□□□□ 0.7
UBE2E3Q969T4 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.41■□□□□ 0.7
UBE2E3Q969T4 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBE2E3Q969T4 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
UBE2E3Q969T4 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBE2E3Q969T4 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.41■□□□□ 0.7
UBE2E3Q969T4 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
UBE2E3Q969T4 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBE2E3Q969T4 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.41■□□□□ 0.7
UBE2E3Q969T4 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.41■□□□□ 0.7
UBE2E3Q969T4 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
UBE2E3Q969T4 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.4■□□□□ 0.7
UBE2E3Q969T4 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.4■□□□□ 0.7
UBE2E3Q969T4 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.4■□□□□ 0.7
UBE2E3Q969T4 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBE2E3Q969T4 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBE2E3Q969T4 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBE2E3Q969T4 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.4■□□□□ 0.7
UBE2E3Q969T4 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms