Protein–RNA interactions for Protein: Q92616

GCN1, eIF-2-alpha kinase activator GCN1, humanhuman

Known RBP Predictions only

Length 2,671 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1Q92616 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
GCN1Q92616 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
GCN1Q92616 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
GCN1Q92616 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
GCN1Q92616 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
GCN1Q92616 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC17.89■□□□□ 0.45
GCN1Q92616 COX10-202ENST00000429152 875 ntTSL 2 BASIC17.89■□□□□ 0.45
GCN1Q92616 BX640515.1-201ENST00000617215 977 ntBASIC17.89■□□□□ 0.45
GCN1Q92616 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.89■□□□□ 0.45
GCN1Q92616 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
GCN1Q92616 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
GCN1Q92616 MIR3180-1-201ENST00000580374 94 ntBASIC17.89■□□□□ 0.45
GCN1Q92616 MIR3180-3-201ENST00000584616 94 ntBASIC17.89■□□□□ 0.45
GCN1Q92616 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.89■□□□□ 0.45
GCN1Q92616 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
GCN1Q92616 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
GCN1Q92616 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC17.89■□□□□ 0.45
GCN1Q92616 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
GCN1Q92616 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
GCN1Q92616 AC079776.4-201ENST00000511039 504 ntBASIC17.88■□□□□ 0.45
GCN1Q92616 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.88■□□□□ 0.45
GCN1Q92616 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.88■□□□□ 0.45
GCN1Q92616 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
GCN1Q92616 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
GCN1Q92616 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.88■□□□□ 0.45
GCN1Q92616 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
GCN1Q92616 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
GCN1Q92616 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
GCN1Q92616 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.88■□□□□ 0.45
GCN1Q92616 HLA-A-201ENST00000376802 1334 ntBASIC17.88■□□□□ 0.45
GCN1Q92616 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC17.88■□□□□ 0.45
GCN1Q92616 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
GCN1Q92616 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
GCN1Q92616 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
GCN1Q92616 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
GCN1Q92616 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
GCN1Q92616 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
GCN1Q92616 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
GCN1Q92616 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
GCN1Q92616 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.87■□□□□ 0.45
GCN1Q92616 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.87■□□□□ 0.45
GCN1Q92616 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.87■□□□□ 0.45
GCN1Q92616 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
GCN1Q92616 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
GCN1Q92616 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
GCN1Q92616 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
GCN1Q92616 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
GCN1Q92616 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
GCN1Q92616 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.87■□□□□ 0.45
GCN1Q92616 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.87■□□□□ 0.45
GCN1Q92616 AC097488.1-201ENST00000507834 756 ntBASIC17.87■□□□□ 0.45
GCN1Q92616 AC106795.1-205ENST00000512851 1056 ntBASIC17.87■□□□□ 0.45
GCN1Q92616 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.87■□□□□ 0.45
GCN1Q92616 AF228730.7-201ENST00000641842 219 ntBASIC17.87■□□□□ 0.45
GCN1Q92616 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.87■□□□□ 0.45
GCN1Q92616 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
GCN1Q92616 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
GCN1Q92616 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
GCN1Q92616 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC17.87■□□□□ 0.45
GCN1Q92616 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.86■□□□□ 0.45
GCN1Q92616 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
GCN1Q92616 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.86■□□□□ 0.45
GCN1Q92616 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
GCN1Q92616 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
GCN1Q92616 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
GCN1Q92616 HLA-J-203ENST00000494367 1087 ntBASIC17.86■□□□□ 0.45
GCN1Q92616 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.86■□□□□ 0.45
GCN1Q92616 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.86■□□□□ 0.45
GCN1Q92616 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
GCN1Q92616 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
GCN1Q92616 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
GCN1Q92616 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
GCN1Q92616 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
GCN1Q92616 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC17.85■□□□□ 0.45
GCN1Q92616 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
GCN1Q92616 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC17.85■□□□□ 0.45
GCN1Q92616 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.85■□□□□ 0.45
GCN1Q92616 AL445675.2-201ENST00000620291 557 ntBASIC17.85■□□□□ 0.45
GCN1Q92616 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
GCN1Q92616 FSCN1P1-201ENST00000568912 1481 ntBASIC17.85■□□□□ 0.45
GCN1Q92616 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
GCN1Q92616 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
GCN1Q92616 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
GCN1Q92616 CCR12P-201ENST00000446203 998 ntBASIC17.85■□□□□ 0.45
GCN1Q92616 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.85■□□□□ 0.45
GCN1Q92616 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
GCN1Q92616 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.85■□□□□ 0.45
GCN1Q92616 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.85■□□□□ 0.45
GCN1Q92616 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
GCN1Q92616 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
GCN1Q92616 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
GCN1Q92616 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
GCN1Q92616 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
GCN1Q92616 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.85■□□□□ 0.45
GCN1Q92616 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
GCN1Q92616 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
GCN1Q92616 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
GCN1Q92616 MIR564-202ENST00000385049 94 ntBASIC17.85■□□□□ 0.45
GCN1Q92616 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.85■□□□□ 0.45
GCN1Q92616 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms