Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC30.23■■■□□ 2.43
ABCA6Q8N139 KSR1P1-201ENST00000446298 240 ntBASIC30.23■■■□□ 2.43
ABCA6Q8N139 AC022616.7-201ENST00000525383 220 ntBASIC30.23■■■□□ 2.43
ABCA6Q8N139 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC30.23■■■□□ 2.43
ABCA6Q8N139 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
ABCA6Q8N139 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC30.23■■■□□ 2.43
ABCA6Q8N139 MFF-203ENST00000349901 1716 ntTSL 2 BASIC30.23■■■□□ 2.43
ABCA6Q8N139 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC30.22■■■□□ 2.43
ABCA6Q8N139 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC30.22■■■□□ 2.43
ABCA6Q8N139 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC30.22■■■□□ 2.43
ABCA6Q8N139 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC30.22■■■□□ 2.43
ABCA6Q8N139 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
ABCA6Q8N139 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC30.22■■■□□ 2.43
ABCA6Q8N139 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
ABCA6Q8N139 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC30.22■■■□□ 2.43
ABCA6Q8N139 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC30.22■■■□□ 2.43
ABCA6Q8N139 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
ABCA6Q8N139 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC30.22■■■□□ 2.43
ABCA6Q8N139 AC004264.1-201ENST00000608354 794 ntBASIC30.22■■■□□ 2.43
ABCA6Q8N139 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC30.22■■■□□ 2.43
ABCA6Q8N139 MYC-208ENST00000641036 567 ntBASIC30.22■■■□□ 2.43
ABCA6Q8N139 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC30.22■■■□□ 2.43
ABCA6Q8N139 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
ABCA6Q8N139 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC30.21■■■□□ 2.43
ABCA6Q8N139 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC30.21■■■□□ 2.43
ABCA6Q8N139 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC30.21■■■□□ 2.43
ABCA6Q8N139 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
ABCA6Q8N139 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
ABCA6Q8N139 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
ABCA6Q8N139 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
ABCA6Q8N139 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC30.21■■■□□ 2.43
ABCA6Q8N139 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
ABCA6Q8N139 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC30.21■■■□□ 2.43
ABCA6Q8N139 MESTP1-201ENST00000404287 994 ntBASIC30.21■■■□□ 2.43
ABCA6Q8N139 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC30.21■■■□□ 2.43
ABCA6Q8N139 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC30.21■■■□□ 2.43
ABCA6Q8N139 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC30.21■■■□□ 2.43
ABCA6Q8N139 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
ABCA6Q8N139 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
ABCA6Q8N139 AC087388.1-201ENST00000571370 1112 ntBASIC30.2■■■□□ 2.43
ABCA6Q8N139 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
ABCA6Q8N139 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC30.2■■■□□ 2.42
ABCA6Q8N139 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
ABCA6Q8N139 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC30.19■■■□□ 2.42
ABCA6Q8N139 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
ABCA6Q8N139 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
ABCA6Q8N139 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
ABCA6Q8N139 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC30.19■■■□□ 2.42
ABCA6Q8N139 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC30.19■■■□□ 2.42
ABCA6Q8N139 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC30.19■■■□□ 2.42
ABCA6Q8N139 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC30.19■■■□□ 2.42
ABCA6Q8N139 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC30.19■■■□□ 2.42
ABCA6Q8N139 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC30.19■■■□□ 2.42
ABCA6Q8N139 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC30.19■■■□□ 2.42
ABCA6Q8N139 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
ABCA6Q8N139 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
ABCA6Q8N139 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC30.19■■■□□ 2.42
ABCA6Q8N139 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
ABCA6Q8N139 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
ABCA6Q8N139 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
ABCA6Q8N139 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC30.18■■■□□ 2.42
ABCA6Q8N139 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
ABCA6Q8N139 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC30.18■■■□□ 2.42
ABCA6Q8N139 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC30.18■■■□□ 2.42
ABCA6Q8N139 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC30.18■■■□□ 2.42
ABCA6Q8N139 C1QL1P1-201ENST00000568105 661 ntBASIC30.18■■■□□ 2.42
ABCA6Q8N139 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
ABCA6Q8N139 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
ABCA6Q8N139 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
ABCA6Q8N139 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC30.18■■■□□ 2.42
ABCA6Q8N139 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
ABCA6Q8N139 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
ABCA6Q8N139 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC30.18■■■□□ 2.42
ABCA6Q8N139 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC30.18■■■□□ 2.42
ABCA6Q8N139 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC30.18■■■□□ 2.42
ABCA6Q8N139 PRR31-201ENST00000371629 978 ntTSL 2 BASIC30.18■■■□□ 2.42
ABCA6Q8N139 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
ABCA6Q8N139 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
ABCA6Q8N139 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC30.18■■■□□ 2.42
ABCA6Q8N139 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC30.18■■■□□ 2.42
ABCA6Q8N139 METTL23-204ENST00000586752 904 ntTSL 2 BASIC30.18■■■□□ 2.42
ABCA6Q8N139 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC30.18■■■□□ 2.42
ABCA6Q8N139 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
ABCA6Q8N139 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
ABCA6Q8N139 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
ABCA6Q8N139 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
ABCA6Q8N139 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC30.17■■■□□ 2.42
ABCA6Q8N139 PTBP1P-201ENST00000554374 1601 ntBASIC30.17■■■□□ 2.42
ABCA6Q8N139 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC30.17■■■□□ 2.42
ABCA6Q8N139 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC30.17■■■□□ 2.42
ABCA6Q8N139 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC30.17■■■□□ 2.42
ABCA6Q8N139 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC30.17■■■□□ 2.42
ABCA6Q8N139 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
ABCA6Q8N139 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC30.17■■■□□ 2.42
ABCA6Q8N139 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
ABCA6Q8N139 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
ABCA6Q8N139 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC30.16■■■□□ 2.42
ABCA6Q8N139 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
ABCA6Q8N139 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC30.16■■■□□ 2.42
ABCA6Q8N139 AC026271.3-201ENST00000571884 352 ntBASIC30.16■■■□□ 2.42
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms