Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
ZNF546Q86UE3 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ZNF546Q86UE3 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
ZNF546Q86UE3 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
ZNF546Q86UE3 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC16.79■□□□□ 0.28
ZNF546Q86UE3 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
ZNF546Q86UE3 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC16.79■□□□□ 0.28
ZNF546Q86UE3 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC16.79■□□□□ 0.28
ZNF546Q86UE3 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ZNF546Q86UE3 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
ZNF546Q86UE3 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
ZNF546Q86UE3 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC16.79■□□□□ 0.28
ZNF546Q86UE3 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.79■□□□□ 0.28
ZNF546Q86UE3 LTB4R2-202ENST00000528054 3092 ntBASIC16.78■□□□□ 0.28
ZNF546Q86UE3 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ZNF546Q86UE3 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ZNF546Q86UE3 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
ZNF546Q86UE3 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC16.78■□□□□ 0.28
ZNF546Q86UE3 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
ZNF546Q86UE3 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
ZNF546Q86UE3 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ZNF546Q86UE3 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
ZNF546Q86UE3 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.78■□□□□ 0.28
ZNF546Q86UE3 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC16.78■□□□□ 0.28
ZNF546Q86UE3 RBM38-205ENST00000440234 686 ntTSL 2 BASIC16.78■□□□□ 0.28
ZNF546Q86UE3 PRTG-204ENST00000561292 833 ntTSL 3 BASIC16.78■□□□□ 0.28
ZNF546Q86UE3 Z92544.1-202ENST00000571933 1220 ntBASIC16.78■□□□□ 0.28
ZNF546Q86UE3 AC241377.3-202ENST00000626088 1088 ntBASIC16.78■□□□□ 0.28
ZNF546Q86UE3 AC241585.3-202ENST00000628937 1088 ntBASIC16.78■□□□□ 0.28
ZNF546Q86UE3 AC245100.8-202ENST00000629247 1058 ntBASIC16.78■□□□□ 0.28
ZNF546Q86UE3 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ZNF546Q86UE3 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
ZNF546Q86UE3 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC16.78■□□□□ 0.28
ZNF546Q86UE3 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
ZNF546Q86UE3 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ZNF546Q86UE3 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.78■□□□□ 0.28
ZNF546Q86UE3 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.78■□□□□ 0.28
ZNF546Q86UE3 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC16.78■□□□□ 0.28
ZNF546Q86UE3 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC16.78■□□□□ 0.28
ZNF546Q86UE3 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
ZNF546Q86UE3 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.77■□□□□ 0.28
ZNF546Q86UE3 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
ZNF546Q86UE3 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ZNF546Q86UE3 AL049812.1-201ENST00000432563 2267 ntBASIC16.77■□□□□ 0.28
ZNF546Q86UE3 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
ZNF546Q86UE3 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
ZNF546Q86UE3 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
ZNF546Q86UE3 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
ZNF546Q86UE3 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC16.77■□□□□ 0.28
ZNF546Q86UE3 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
ZNF546Q86UE3 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ZNF546Q86UE3 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.28
ZNF546Q86UE3 HES6-204ENST00000409182 863 ntTSL 2 BASIC16.77■□□□□ 0.28
ZNF546Q86UE3 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.77■□□□□ 0.28
ZNF546Q86UE3 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC16.77■□□□□ 0.28
ZNF546Q86UE3 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
ZNF546Q86UE3 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC16.77■□□□□ 0.28
ZNF546Q86UE3 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
ZNF546Q86UE3 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
ZNF546Q86UE3 Z82202.1-201ENST00000623446 1880 ntBASIC16.77■□□□□ 0.27
ZNF546Q86UE3 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
ZNF546Q86UE3 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ZNF546Q86UE3 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC16.77■□□□□ 0.27
ZNF546Q86UE3 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC16.77■□□□□ 0.27
ZNF546Q86UE3 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.77■□□□□ 0.27
ZNF546Q86UE3 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
ZNF546Q86UE3 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
ZNF546Q86UE3 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
ZNF546Q86UE3 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
ZNF546Q86UE3 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ZNF546Q86UE3 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.76■□□□□ 0.27
ZNF546Q86UE3 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ZNF546Q86UE3 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
ZNF546Q86UE3 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ZNF546Q86UE3 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
ZNF546Q86UE3 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
ZNF546Q86UE3 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC16.76■□□□□ 0.27
ZNF546Q86UE3 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
ZNF546Q86UE3 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ZNF546Q86UE3 STX4-202ENST00000394998 1498 ntTSL 2 BASIC16.76■□□□□ 0.27
ZNF546Q86UE3 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ZNF546Q86UE3 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ZNF546Q86UE3 AC010997.5-201ENST00000609182 354 ntBASIC16.76■□□□□ 0.27
ZNF546Q86UE3 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC16.76■□□□□ 0.27
ZNF546Q86UE3 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ZNF546Q86UE3 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
ZNF546Q86UE3 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ZNF546Q86UE3 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
ZNF546Q86UE3 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
ZNF546Q86UE3 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
ZNF546Q86UE3 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
ZNF546Q86UE3 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ZNF546Q86UE3 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ZNF546Q86UE3 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ZNF546Q86UE3 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC16.76■□□□□ 0.27
ZNF546Q86UE3 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC16.76■□□□□ 0.27
ZNF546Q86UE3 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
ZNF546Q86UE3 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC16.76■□□□□ 0.27
ZNF546Q86UE3 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC16.76■□□□□ 0.27
ZNF546Q86UE3 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms