Protein–RNA interactions for Protein: Q6ZV60

LINC00173, Putative uncharacterized protein encoded by LINC00173, humanhuman

Predictions only

Length 143 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173Q6ZV60 AC092720.2-201ENST00000602388 1665 ntBASIC14.64□□□□□ -0.07
LINC00173Q6ZV60 AL032819.2-201ENST00000624543 2162 ntBASIC14.64□□□□□ -0.07
LINC00173Q6ZV60 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINC00173Q6ZV60 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINC00173Q6ZV60 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINC00173Q6ZV60 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LINC00173Q6ZV60 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
LINC00173Q6ZV60 STX5-203ENST00000394690 1568 ntTSL 5 BASIC14.64□□□□□ -0.07
LINC00173Q6ZV60 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINC00173Q6ZV60 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LINC00173Q6ZV60 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LINC00173Q6ZV60 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
LINC00173Q6ZV60 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LINC00173Q6ZV60 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LINC00173Q6ZV60 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC14.63□□□□□ -0.07
LINC00173Q6ZV60 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
LINC00173Q6ZV60 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LINC00173Q6ZV60 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
LINC00173Q6ZV60 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC14.63□□□□□ -0.07
LINC00173Q6ZV60 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC14.63□□□□□ -0.07
LINC00173Q6ZV60 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LINC00173Q6ZV60 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC14.63□□□□□ -0.07
LINC00173Q6ZV60 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LINC00173Q6ZV60 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
LINC00173Q6ZV60 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LINC00173Q6ZV60 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LINC00173Q6ZV60 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
LINC00173Q6ZV60 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LINC00173Q6ZV60 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
LINC00173Q6ZV60 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
LINC00173Q6ZV60 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
LINC00173Q6ZV60 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LINC00173Q6ZV60 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
LINC00173Q6ZV60 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LINC00173Q6ZV60 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LINC00173Q6ZV60 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LINC00173Q6ZV60 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
LINC00173Q6ZV60 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LINC00173Q6ZV60 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LINC00173Q6ZV60 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LINC00173Q6ZV60 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LINC00173Q6ZV60 KRT8P33-201ENST00000508125 1423 ntBASIC14.62□□□□□ -0.07
LINC00173Q6ZV60 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC14.62□□□□□ -0.07
LINC00173Q6ZV60 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC14.62□□□□□ -0.07
LINC00173Q6ZV60 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC14.62□□□□□ -0.07
LINC00173Q6ZV60 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC14.62□□□□□ -0.07
LINC00173Q6ZV60 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC14.62□□□□□ -0.07
LINC00173Q6ZV60 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC14.62□□□□□ -0.07
LINC00173Q6ZV60 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
LINC00173Q6ZV60 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LINC00173Q6ZV60 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
LINC00173Q6ZV60 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LINC00173Q6ZV60 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LINC00173Q6ZV60 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LINC00173Q6ZV60 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
LINC00173Q6ZV60 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LINC00173Q6ZV60 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LINC00173Q6ZV60 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LINC00173Q6ZV60 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LINC00173Q6ZV60 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
LINC00173Q6ZV60 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC14.62□□□□□ -0.07
LINC00173Q6ZV60 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LINC00173Q6ZV60 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC14.62□□□□□ -0.07
LINC00173Q6ZV60 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00173Q6ZV60 GTSE1-AS1-202ENST00000623117 1518 ntBASIC14.61□□□□□ -0.07
LINC00173Q6ZV60 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
LINC00173Q6ZV60 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC14.61□□□□□ -0.07
LINC00173Q6ZV60 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC14.61□□□□□ -0.07
LINC00173Q6ZV60 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC14.61□□□□□ -0.07
LINC00173Q6ZV60 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
LINC00173Q6ZV60 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00173Q6ZV60 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00173Q6ZV60 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00173Q6ZV60 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC14.61□□□□□ -0.07
LINC00173Q6ZV60 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00173Q6ZV60 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
LINC00173Q6ZV60 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00173Q6ZV60 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC14.61□□□□□ -0.07
LINC00173Q6ZV60 YBX1P4-201ENST00000392794 808 ntBASIC14.61□□□□□ -0.07
LINC00173Q6ZV60 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00173Q6ZV60 AL451085.2-201ENST00000605085 799 ntBASIC14.61□□□□□ -0.07
LINC00173Q6ZV60 AL031848.2-201ENST00000607670 837 ntBASIC14.61□□□□□ -0.07
LINC00173Q6ZV60 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC14.61□□□□□ -0.07
LINC00173Q6ZV60 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC14.61□□□□□ -0.07
LINC00173Q6ZV60 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC14.61□□□□□ -0.07
LINC00173Q6ZV60 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00173Q6ZV60 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC14.61□□□□□ -0.07
LINC00173Q6ZV60 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00173Q6ZV60 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00173Q6ZV60 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00173Q6ZV60 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00173Q6ZV60 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00173Q6ZV60 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
LINC00173Q6ZV60 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00173Q6ZV60 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC00173Q6ZV60 AC020916.1-201ENST00000587762 1774 ntBASIC14.6□□□□□ -0.07
LINC00173Q6ZV60 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC00173Q6ZV60 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
LINC00173Q6ZV60 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC14.6□□□□□ -0.07
LINC00173Q6ZV60 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms