Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LPCAT4Q643R3 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LPCAT4Q643R3 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LPCAT4Q643R3 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
LPCAT4Q643R3 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.04■□□□□ 0.64
LPCAT4Q643R3 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.04■□□□□ 0.64
LPCAT4Q643R3 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.04■□□□□ 0.64
LPCAT4Q643R3 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.04■□□□□ 0.64
LPCAT4Q643R3 EXOG-217ENST00000630638 197 ntTSL 5 BASIC19.04■□□□□ 0.64
LPCAT4Q643R3 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
LPCAT4Q643R3 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LPCAT4Q643R3 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LPCAT4Q643R3 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.04■□□□□ 0.64
LPCAT4Q643R3 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LPCAT4Q643R3 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.04■□□□□ 0.64
LPCAT4Q643R3 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LPCAT4Q643R3 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
LPCAT4Q643R3 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LPCAT4Q643R3 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LPCAT4Q643R3 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LPCAT4Q643R3 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LPCAT4Q643R3 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LPCAT4Q643R3 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LPCAT4Q643R3 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LPCAT4Q643R3 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.03■□□□□ 0.64
LPCAT4Q643R3 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
LPCAT4Q643R3 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.03■□□□□ 0.64
LPCAT4Q643R3 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
LPCAT4Q643R3 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
LPCAT4Q643R3 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
LPCAT4Q643R3 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LPCAT4Q643R3 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LPCAT4Q643R3 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LPCAT4Q643R3 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LPCAT4Q643R3 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
LPCAT4Q643R3 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LPCAT4Q643R3 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LPCAT4Q643R3 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LPCAT4Q643R3 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LPCAT4Q643R3 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LPCAT4Q643R3 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
LPCAT4Q643R3 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
LPCAT4Q643R3 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LPCAT4Q643R3 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
LPCAT4Q643R3 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LPCAT4Q643R3 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LPCAT4Q643R3 MIR3181-201ENST00000578512 73 ntBASIC19.02■□□□□ 0.64
LPCAT4Q643R3 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LPCAT4Q643R3 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
LPCAT4Q643R3 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
LPCAT4Q643R3 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
LPCAT4Q643R3 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LPCAT4Q643R3 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LPCAT4Q643R3 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
LPCAT4Q643R3 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.01■□□□□ 0.63
LPCAT4Q643R3 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.01■□□□□ 0.63
LPCAT4Q643R3 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LPCAT4Q643R3 FZD10-202ENST00000539839 3282 ntBASIC19.01■□□□□ 0.63
LPCAT4Q643R3 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.01■□□□□ 0.63
LPCAT4Q643R3 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LPCAT4Q643R3 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LPCAT4Q643R3 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
LPCAT4Q643R3 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
LPCAT4Q643R3 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LPCAT4Q643R3 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LPCAT4Q643R3 AC020763.4-201ENST00000623414 4170 ntBASIC19.01■□□□□ 0.63
LPCAT4Q643R3 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
LPCAT4Q643R3 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LPCAT4Q643R3 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.01■□□□□ 0.63
LPCAT4Q643R3 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.01■□□□□ 0.63
LPCAT4Q643R3 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.01■□□□□ 0.63
LPCAT4Q643R3 AL138781.2-201ENST00000617896 1843 ntBASIC19.01■□□□□ 0.63
LPCAT4Q643R3 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.01■□□□□ 0.63
LPCAT4Q643R3 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
LPCAT4Q643R3 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.01■□□□□ 0.63
LPCAT4Q643R3 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LPCAT4Q643R3 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LPCAT4Q643R3 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LPCAT4Q643R3 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LPCAT4Q643R3 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LPCAT4Q643R3 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.01■□□□□ 0.63
LPCAT4Q643R3 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LPCAT4Q643R3 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LPCAT4Q643R3 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
LPCAT4Q643R3 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LPCAT4Q643R3 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19■□□□□ 0.63
LPCAT4Q643R3 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19■□□□□ 0.63
LPCAT4Q643R3 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LPCAT4Q643R3 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LPCAT4Q643R3 AC099791.2-201ENST00000605725 427 ntBASIC19■□□□□ 0.63
LPCAT4Q643R3 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19■□□□□ 0.63
LPCAT4Q643R3 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
LPCAT4Q643R3 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
LPCAT4Q643R3 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LPCAT4Q643R3 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LPCAT4Q643R3 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19■□□□□ 0.63
LPCAT4Q643R3 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
LPCAT4Q643R3 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19■□□□□ 0.63
LPCAT4Q643R3 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LPCAT4Q643R3 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms