Protein–RNA interactions for Protein: Q5VVM6

CCDC30, Coiled-coil domain-containing protein 30, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30Q5VVM6 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
CCDC30Q5VVM6 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
CCDC30Q5VVM6 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC25.83■■□□□ 1.73
CCDC30Q5VVM6 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC25.83■■□□□ 1.72
CCDC30Q5VVM6 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC25.82■■□□□ 1.72
CCDC30Q5VVM6 ME2-216ENST00000639850 2331 ntTSL 5 BASIC25.82■■□□□ 1.72
CCDC30Q5VVM6 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CCDC30Q5VVM6 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CCDC30Q5VVM6 PRORSD1P-201ENST00000295112 541 ntBASIC25.82■■□□□ 1.72
CCDC30Q5VVM6 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CCDC30Q5VVM6 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC25.82■■□□□ 1.72
CCDC30Q5VVM6 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CCDC30Q5VVM6 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC25.82■■□□□ 1.72
CCDC30Q5VVM6 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC25.82■■□□□ 1.72
CCDC30Q5VVM6 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC25.82■■□□□ 1.72
CCDC30Q5VVM6 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC25.82■■□□□ 1.72
CCDC30Q5VVM6 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC25.82■■□□□ 1.72
CCDC30Q5VVM6 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
CCDC30Q5VVM6 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC25.82■■□□□ 1.72
CCDC30Q5VVM6 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC25.82■■□□□ 1.72
CCDC30Q5VVM6 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC25.82■■□□□ 1.72
CCDC30Q5VVM6 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC25.82■■□□□ 1.72
CCDC30Q5VVM6 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
CCDC30Q5VVM6 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CCDC30Q5VVM6 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CCDC30Q5VVM6 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC25.82■■□□□ 1.72
CCDC30Q5VVM6 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
CCDC30Q5VVM6 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC25.81■■□□□ 1.72
CCDC30Q5VVM6 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
CCDC30Q5VVM6 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
CCDC30Q5VVM6 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC25.81■■□□□ 1.72
CCDC30Q5VVM6 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC25.81■■□□□ 1.72
CCDC30Q5VVM6 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
CCDC30Q5VVM6 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
CCDC30Q5VVM6 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
CCDC30Q5VVM6 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
CCDC30Q5VVM6 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
CCDC30Q5VVM6 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
CCDC30Q5VVM6 RER1-204ENST00000378518 522 ntTSL 3 BASIC25.81■■□□□ 1.72
CCDC30Q5VVM6 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC25.81■■□□□ 1.72
CCDC30Q5VVM6 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC25.81■■□□□ 1.72
CCDC30Q5VVM6 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC25.81■■□□□ 1.72
CCDC30Q5VVM6 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
CCDC30Q5VVM6 AC073648.6-201ENST00000641589 218 ntBASIC25.81■■□□□ 1.72
CCDC30Q5VVM6 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC25.81■■□□□ 1.72
CCDC30Q5VVM6 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
CCDC30Q5VVM6 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC25.81■■□□□ 1.72
CCDC30Q5VVM6 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC25.81■■□□□ 1.72
CCDC30Q5VVM6 AC092720.2-201ENST00000602388 1665 ntBASIC25.8■■□□□ 1.72
CCDC30Q5VVM6 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC25.8■■□□□ 1.72
CCDC30Q5VVM6 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC25.8■■□□□ 1.72
CCDC30Q5VVM6 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC25.8■■□□□ 1.72
CCDC30Q5VVM6 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CCDC30Q5VVM6 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC25.8■■□□□ 1.72
CCDC30Q5VVM6 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CCDC30Q5VVM6 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
CCDC30Q5VVM6 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
CCDC30Q5VVM6 IRX5-204ENST00000560154 879 ntTSL 5 BASIC25.8■■□□□ 1.72
CCDC30Q5VVM6 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC25.8■■□□□ 1.72
CCDC30Q5VVM6 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
CCDC30Q5VVM6 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CCDC30Q5VVM6 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC25.8■■□□□ 1.72
CCDC30Q5VVM6 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC25.8■■□□□ 1.72
CCDC30Q5VVM6 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CCDC30Q5VVM6 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC25.8■■□□□ 1.72
CCDC30Q5VVM6 H19-201ENST00000411754 1788 ntTSL 5 BASIC25.79■■□□□ 1.72
CCDC30Q5VVM6 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
CCDC30Q5VVM6 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC25.79■■□□□ 1.72
CCDC30Q5VVM6 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC25.79■■□□□ 1.72
CCDC30Q5VVM6 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC25.79■■□□□ 1.72
CCDC30Q5VVM6 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
CCDC30Q5VVM6 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
CCDC30Q5VVM6 KRT17P3-201ENST00000420566 1262 ntBASIC25.79■■□□□ 1.72
CCDC30Q5VVM6 POM121L13P-201ENST00000422362 380 ntBASIC25.79■■□□□ 1.72
CCDC30Q5VVM6 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC25.79■■□□□ 1.72
CCDC30Q5VVM6 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
CCDC30Q5VVM6 AC120498.8-201ENST00000614275 531 ntBASIC25.79■■□□□ 1.72
CCDC30Q5VVM6 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC25.79■■□□□ 1.72
CCDC30Q5VVM6 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC25.79■■□□□ 1.72
CCDC30Q5VVM6 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC25.79■■□□□ 1.72
CCDC30Q5VVM6 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC25.79■■□□□ 1.72
CCDC30Q5VVM6 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC25.79■■□□□ 1.72
CCDC30Q5VVM6 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC25.78■■□□□ 1.72
CCDC30Q5VVM6 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
CCDC30Q5VVM6 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
CCDC30Q5VVM6 ABHD17AP6-201ENST00000458502 1044 ntBASIC25.78■■□□□ 1.72
CCDC30Q5VVM6 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC25.78■■□□□ 1.72
CCDC30Q5VVM6 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC25.78■■□□□ 1.72
CCDC30Q5VVM6 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC25.78■■□□□ 1.72
CCDC30Q5VVM6 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC25.78■■□□□ 1.72
CCDC30Q5VVM6 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
CCDC30Q5VVM6 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
CCDC30Q5VVM6 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
CCDC30Q5VVM6 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC25.77■■□□□ 1.72
CCDC30Q5VVM6 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC25.77■■□□□ 1.72
CCDC30Q5VVM6 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
CCDC30Q5VVM6 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC25.77■■□□□ 1.72
CCDC30Q5VVM6 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
CCDC30Q5VVM6 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
CCDC30Q5VVM6 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms