Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC25.67■■□□□ 1.7
RC3H1Q5TC82 KSR1P1-201ENST00000446298 240 ntBASIC25.67■■□□□ 1.7
RC3H1Q5TC82 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
RC3H1Q5TC82 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC25.67■■□□□ 1.7
RC3H1Q5TC82 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC25.67■■□□□ 1.7
RC3H1Q5TC82 AC010947.1-201ENST00000623454 693 ntBASIC25.67■■□□□ 1.7
RC3H1Q5TC82 PALM-207ENST00000590161 2137 ntTSL 4 BASIC25.67■■□□□ 1.7
RC3H1Q5TC82 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
RC3H1Q5TC82 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC25.67■■□□□ 1.7
RC3H1Q5TC82 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
RC3H1Q5TC82 STAC-204ENST00000457375 1366 ntTSL 2 BASIC25.67■■□□□ 1.7
RC3H1Q5TC82 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
RC3H1Q5TC82 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
RC3H1Q5TC82 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
RC3H1Q5TC82 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC25.66■■□□□ 1.7
RC3H1Q5TC82 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC25.66■■□□□ 1.7
RC3H1Q5TC82 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC25.66■■□□□ 1.7
RC3H1Q5TC82 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
RC3H1Q5TC82 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
RC3H1Q5TC82 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC25.66■■□□□ 1.7
RC3H1Q5TC82 NAPSB-206ENST00000562112 1266 ntBASIC25.66■■□□□ 1.7
RC3H1Q5TC82 RMI2-205ENST00000576027 818 ntTSL 2 BASIC25.66■■□□□ 1.7
RC3H1Q5TC82 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC25.66■■□□□ 1.7
RC3H1Q5TC82 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC25.66■■□□□ 1.7
RC3H1Q5TC82 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
RC3H1Q5TC82 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
RC3H1Q5TC82 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC25.66■■□□□ 1.7
RC3H1Q5TC82 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC25.66■■□□□ 1.7
RC3H1Q5TC82 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC25.66■■□□□ 1.7
RC3H1Q5TC82 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC25.66■■□□□ 1.7
RC3H1Q5TC82 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
RC3H1Q5TC82 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
RC3H1Q5TC82 KRT18P22-201ENST00000402024 1347 ntBASIC25.65■■□□□ 1.7
RC3H1Q5TC82 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
RC3H1Q5TC82 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
RC3H1Q5TC82 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC25.65■■□□□ 1.7
RC3H1Q5TC82 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
RC3H1Q5TC82 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC25.65■■□□□ 1.7
RC3H1Q5TC82 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC25.65■■□□□ 1.7
RC3H1Q5TC82 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
RC3H1Q5TC82 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC25.65■■□□□ 1.7
RC3H1Q5TC82 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC25.65■■□□□ 1.7
RC3H1Q5TC82 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC25.65■■□□□ 1.7
RC3H1Q5TC82 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC25.65■■□□□ 1.7
RC3H1Q5TC82 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC25.65■■□□□ 1.7
RC3H1Q5TC82 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
RC3H1Q5TC82 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
RC3H1Q5TC82 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
RC3H1Q5TC82 PARN-205ENST00000539279 1557 ntTSL 2 BASIC25.65■■□□□ 1.7
RC3H1Q5TC82 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
RC3H1Q5TC82 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
RC3H1Q5TC82 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC25.64■■□□□ 1.7
RC3H1Q5TC82 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC25.64■■□□□ 1.7
RC3H1Q5TC82 TERF1P1-201ENST00000311003 1181 ntBASIC25.64■■□□□ 1.7
RC3H1Q5TC82 NIFKP9-201ENST00000419265 221 ntBASIC25.64■■□□□ 1.7
RC3H1Q5TC82 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC25.64■■□□□ 1.7
RC3H1Q5TC82 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC25.64■■□□□ 1.7
RC3H1Q5TC82 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC25.64■■□□□ 1.7
RC3H1Q5TC82 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC25.64■■□□□ 1.7
RC3H1Q5TC82 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC25.64■■□□□ 1.7
RC3H1Q5TC82 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC25.64■■□□□ 1.7
RC3H1Q5TC82 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC25.64■■□□□ 1.69
RC3H1Q5TC82 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
RC3H1Q5TC82 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
RC3H1Q5TC82 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
RC3H1Q5TC82 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC25.64■■□□□ 1.69
RC3H1Q5TC82 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
RC3H1Q5TC82 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
RC3H1Q5TC82 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
RC3H1Q5TC82 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC25.63■■□□□ 1.69
RC3H1Q5TC82 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
RC3H1Q5TC82 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
RC3H1Q5TC82 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
RC3H1Q5TC82 DYM-203ENST00000442713 2147 ntTSL 2 BASIC25.63■■□□□ 1.69
RC3H1Q5TC82 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
RC3H1Q5TC82 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC25.63■■□□□ 1.69
RC3H1Q5TC82 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
RC3H1Q5TC82 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
RC3H1Q5TC82 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC25.63■■□□□ 1.69
RC3H1Q5TC82 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC25.63■■□□□ 1.69
RC3H1Q5TC82 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
RC3H1Q5TC82 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC25.63■■□□□ 1.69
RC3H1Q5TC82 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
RC3H1Q5TC82 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC25.63■■□□□ 1.69
RC3H1Q5TC82 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
RC3H1Q5TC82 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC25.62■■□□□ 1.69
RC3H1Q5TC82 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
RC3H1Q5TC82 TUB-203ENST00000534099 1759 ntTSL 2 BASIC25.62■■□□□ 1.69
RC3H1Q5TC82 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC25.62■■□□□ 1.69
RC3H1Q5TC82 CRAT-202ENST00000393384 973 ntTSL 2 BASIC25.62■■□□□ 1.69
RC3H1Q5TC82 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC25.62■■□□□ 1.69
RC3H1Q5TC82 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC25.62■■□□□ 1.69
RC3H1Q5TC82 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
RC3H1Q5TC82 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
RC3H1Q5TC82 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC25.62■■□□□ 1.69
RC3H1Q5TC82 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC25.62■■□□□ 1.69
RC3H1Q5TC82 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
RC3H1Q5TC82 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC25.61■■□□□ 1.69
RC3H1Q5TC82 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC25.61■■□□□ 1.69
RC3H1Q5TC82 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms