Protein–RNA interactions for Protein: Q5RKV6

EXOSC6, Exosome complex component MTR3, humanhuman

Known RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC6Q5RKV6 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
EXOSC6Q5RKV6 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
EXOSC6Q5RKV6 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.77■□□□□ 0.6
EXOSC6Q5RKV6 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
EXOSC6Q5RKV6 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
EXOSC6Q5RKV6 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
EXOSC6Q5RKV6 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
EXOSC6Q5RKV6 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
EXOSC6Q5RKV6 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
EXOSC6Q5RKV6 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.77■□□□□ 0.6
EXOSC6Q5RKV6 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
EXOSC6Q5RKV6 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC18.77■□□□□ 0.6
EXOSC6Q5RKV6 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.77■□□□□ 0.6
EXOSC6Q5RKV6 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.77■□□□□ 0.6
EXOSC6Q5RKV6 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.77■□□□□ 0.6
EXOSC6Q5RKV6 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.77■□□□□ 0.6
EXOSC6Q5RKV6 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
EXOSC6Q5RKV6 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
EXOSC6Q5RKV6 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.77■□□□□ 0.6
EXOSC6Q5RKV6 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.77■□□□□ 0.6
EXOSC6Q5RKV6 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
EXOSC6Q5RKV6 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
EXOSC6Q5RKV6 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
EXOSC6Q5RKV6 PTBP1P-201ENST00000554374 1601 ntBASIC18.77■□□□□ 0.6
EXOSC6Q5RKV6 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.59
EXOSC6Q5RKV6 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.77■□□□□ 0.59
EXOSC6Q5RKV6 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
EXOSC6Q5RKV6 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
EXOSC6Q5RKV6 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
EXOSC6Q5RKV6 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
EXOSC6Q5RKV6 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
EXOSC6Q5RKV6 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
EXOSC6Q5RKV6 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
EXOSC6Q5RKV6 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.76■□□□□ 0.59
EXOSC6Q5RKV6 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
EXOSC6Q5RKV6 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
EXOSC6Q5RKV6 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
EXOSC6Q5RKV6 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
EXOSC6Q5RKV6 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
EXOSC6Q5RKV6 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
EXOSC6Q5RKV6 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
EXOSC6Q5RKV6 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
EXOSC6Q5RKV6 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
EXOSC6Q5RKV6 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
EXOSC6Q5RKV6 AL355472.2-201ENST00000422958 438 ntBASIC18.76■□□□□ 0.59
EXOSC6Q5RKV6 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.76■□□□□ 0.59
EXOSC6Q5RKV6 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.76■□□□□ 0.59
EXOSC6Q5RKV6 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.76■□□□□ 0.59
EXOSC6Q5RKV6 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.76■□□□□ 0.59
EXOSC6Q5RKV6 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
EXOSC6Q5RKV6 SMG8-203ENST00000578922 2178 ntBASIC18.76■□□□□ 0.59
EXOSC6Q5RKV6 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.76■□□□□ 0.59
EXOSC6Q5RKV6 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
EXOSC6Q5RKV6 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
EXOSC6Q5RKV6 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
EXOSC6Q5RKV6 DPP3P2-201ENST00000416030 1696 ntBASIC18.76■□□□□ 0.59
EXOSC6Q5RKV6 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
EXOSC6Q5RKV6 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
EXOSC6Q5RKV6 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
EXOSC6Q5RKV6 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
EXOSC6Q5RKV6 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.75■□□□□ 0.59
EXOSC6Q5RKV6 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
EXOSC6Q5RKV6 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
EXOSC6Q5RKV6 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
EXOSC6Q5RKV6 CROCCP5-201ENST00000436658 830 ntBASIC18.75■□□□□ 0.59
EXOSC6Q5RKV6 AC026185.1-201ENST00000445748 174 ntBASIC18.75■□□□□ 0.59
EXOSC6Q5RKV6 AC008694.1-202ENST00000636953 945 ntBASIC18.75■□□□□ 0.59
EXOSC6Q5RKV6 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
EXOSC6Q5RKV6 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
EXOSC6Q5RKV6 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
EXOSC6Q5RKV6 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.75■□□□□ 0.59
EXOSC6Q5RKV6 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
EXOSC6Q5RKV6 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.75■□□□□ 0.59
EXOSC6Q5RKV6 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
EXOSC6Q5RKV6 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
EXOSC6Q5RKV6 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
EXOSC6Q5RKV6 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.74■□□□□ 0.59
EXOSC6Q5RKV6 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
EXOSC6Q5RKV6 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
EXOSC6Q5RKV6 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
EXOSC6Q5RKV6 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.74■□□□□ 0.59
EXOSC6Q5RKV6 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
EXOSC6Q5RKV6 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.74■□□□□ 0.59
EXOSC6Q5RKV6 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
EXOSC6Q5RKV6 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
EXOSC6Q5RKV6 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
EXOSC6Q5RKV6 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.74■□□□□ 0.59
EXOSC6Q5RKV6 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
EXOSC6Q5RKV6 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
EXOSC6Q5RKV6 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
EXOSC6Q5RKV6 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.74■□□□□ 0.59
EXOSC6Q5RKV6 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.74■□□□□ 0.59
EXOSC6Q5RKV6 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
EXOSC6Q5RKV6 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
EXOSC6Q5RKV6 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
EXOSC6Q5RKV6 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
EXOSC6Q5RKV6 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
EXOSC6Q5RKV6 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
EXOSC6Q5RKV6 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.73■□□□□ 0.59
EXOSC6Q5RKV6 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms