Protein–RNA interactions for Protein: P61077

UBE2D3, Ubiquitin-conjugating enzyme E2 D3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3P61077 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UBE2D3P61077 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
UBE2D3P61077 SP2-202ENST00000613139 908 ntTSL 5 BASIC14.35□□□□□ -0.11
UBE2D3P61077 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC14.35□□□□□ -0.11
UBE2D3P61077 MIR2861-201ENST00000636310 90 ntBASIC14.35□□□□□ -0.11
UBE2D3P61077 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
UBE2D3P61077 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UBE2D3P61077 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC14.35□□□□□ -0.11
UBE2D3P61077 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
UBE2D3P61077 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
UBE2D3P61077 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UBE2D3P61077 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UBE2D3P61077 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC14.35□□□□□ -0.11
UBE2D3P61077 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
UBE2D3P61077 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
UBE2D3P61077 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
UBE2D3P61077 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UBE2D3P61077 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
UBE2D3P61077 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
UBE2D3P61077 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC14.34□□□□□ -0.11
UBE2D3P61077 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBE2D3P61077 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBE2D3P61077 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBE2D3P61077 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC14.34□□□□□ -0.11
UBE2D3P61077 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBE2D3P61077 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBE2D3P61077 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBE2D3P61077 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
UBE2D3P61077 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC14.34□□□□□ -0.11
UBE2D3P61077 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBE2D3P61077 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC14.34□□□□□ -0.11
UBE2D3P61077 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
UBE2D3P61077 KRT18P14-201ENST00000534205 1250 ntBASIC14.34□□□□□ -0.11
UBE2D3P61077 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC14.34□□□□□ -0.11
UBE2D3P61077 AC243732.1-201ENST00000612648 864 ntBASIC14.34□□□□□ -0.11
UBE2D3P61077 RAB43-208ENST00000615093 783 ntTSL 5 BASIC14.34□□□□□ -0.11
UBE2D3P61077 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC14.34□□□□□ -0.11
UBE2D3P61077 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC14.34□□□□□ -0.11
UBE2D3P61077 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
UBE2D3P61077 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
UBE2D3P61077 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBE2D3P61077 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBE2D3P61077 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBE2D3P61077 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC14.34□□□□□ -0.11
UBE2D3P61077 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC14.34□□□□□ -0.11
UBE2D3P61077 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC14.34□□□□□ -0.11
UBE2D3P61077 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
UBE2D3P61077 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
UBE2D3P61077 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
UBE2D3P61077 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
UBE2D3P61077 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
UBE2D3P61077 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
UBE2D3P61077 USP39-204ENST00000409766 2033 ntTSL 2 BASIC14.33□□□□□ -0.12
UBE2D3P61077 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
UBE2D3P61077 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
UBE2D3P61077 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
UBE2D3P61077 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
UBE2D3P61077 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
UBE2D3P61077 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC14.33□□□□□ -0.12
UBE2D3P61077 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
UBE2D3P61077 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
UBE2D3P61077 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC14.33□□□□□ -0.12
UBE2D3P61077 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC14.33□□□□□ -0.12
UBE2D3P61077 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC14.33□□□□□ -0.12
UBE2D3P61077 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC14.33□□□□□ -0.12
UBE2D3P61077 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC14.33□□□□□ -0.12
UBE2D3P61077 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC14.33□□□□□ -0.12
UBE2D3P61077 SLC7A5P1-201ENST00000568957 537 ntBASIC14.33□□□□□ -0.12
UBE2D3P61077 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC14.33□□□□□ -0.12
UBE2D3P61077 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC14.33□□□□□ -0.12
UBE2D3P61077 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
UBE2D3P61077 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
UBE2D3P61077 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
UBE2D3P61077 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
UBE2D3P61077 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
UBE2D3P61077 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
UBE2D3P61077 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC14.33□□□□□ -0.12
UBE2D3P61077 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC14.33□□□□□ -0.12
UBE2D3P61077 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
UBE2D3P61077 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
UBE2D3P61077 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
UBE2D3P61077 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
UBE2D3P61077 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBE2D3P61077 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBE2D3P61077 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC14.32□□□□□ -0.12
UBE2D3P61077 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC14.32□□□□□ -0.12
UBE2D3P61077 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBE2D3P61077 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
UBE2D3P61077 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBE2D3P61077 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBE2D3P61077 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
UBE2D3P61077 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
UBE2D3P61077 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBE2D3P61077 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBE2D3P61077 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC14.32□□□□□ -0.12
UBE2D3P61077 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC14.32□□□□□ -0.12
UBE2D3P61077 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC14.32□□□□□ -0.12
UBE2D3P61077 FGF8-207ENST00000618991 856 ntTSL 3 BASIC14.32□□□□□ -0.12
UBE2D3P61077 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
UBE2D3P61077 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms