Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.35■□□□□ 0.37
AP3S2P59780 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
AP3S2P59780 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
AP3S2P59780 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
AP3S2P59780 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
AP3S2P59780 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC17.35■□□□□ 0.37
AP3S2P59780 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
AP3S2P59780 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
AP3S2P59780 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.34■□□□□ 0.37
AP3S2P59780 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.34■□□□□ 0.37
AP3S2P59780 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
AP3S2P59780 GUK1-208ENST00000366728 842 ntTSL 2 BASIC17.34■□□□□ 0.37
AP3S2P59780 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
AP3S2P59780 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
AP3S2P59780 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC17.34■□□□□ 0.37
AP3S2P59780 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
AP3S2P59780 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.34■□□□□ 0.37
AP3S2P59780 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
AP3S2P59780 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.34■□□□□ 0.37
AP3S2P59780 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
AP3S2P59780 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
AP3S2P59780 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
AP3S2P59780 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.34■□□□□ 0.37
AP3S2P59780 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
AP3S2P59780 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
AP3S2P59780 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
AP3S2P59780 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.33■□□□□ 0.37
AP3S2P59780 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.33■□□□□ 0.37
AP3S2P59780 AC093484.2-201ENST00000580996 2166 ntBASIC17.33■□□□□ 0.37
AP3S2P59780 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
AP3S2P59780 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
AP3S2P59780 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.37
AP3S2P59780 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.33■□□□□ 0.37
AP3S2P59780 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC17.33■□□□□ 0.37
AP3S2P59780 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
AP3S2P59780 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
AP3S2P59780 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
AP3S2P59780 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
AP3S2P59780 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC17.33■□□□□ 0.36
AP3S2P59780 AP005435.1-201ENST00000529293 1178 ntBASIC17.33■□□□□ 0.36
AP3S2P59780 AC099791.2-201ENST00000605725 427 ntBASIC17.33■□□□□ 0.36
AP3S2P59780 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC17.33■□□□□ 0.36
AP3S2P59780 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC17.33■□□□□ 0.36
AP3S2P59780 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
AP3S2P59780 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
AP3S2P59780 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
AP3S2P59780 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.33■□□□□ 0.36
AP3S2P59780 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.33■□□□□ 0.36
AP3S2P59780 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
AP3S2P59780 AC026471.1-201ENST00000564629 3026 ntBASIC17.33■□□□□ 0.36
AP3S2P59780 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
AP3S2P59780 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC17.32■□□□□ 0.36
AP3S2P59780 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC17.32■□□□□ 0.36
AP3S2P59780 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC17.32■□□□□ 0.36
AP3S2P59780 LETM1P2-201ENST00000597330 2178 ntBASIC17.32■□□□□ 0.36
AP3S2P59780 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
AP3S2P59780 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.32■□□□□ 0.36
AP3S2P59780 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
AP3S2P59780 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP3S2P59780 AC010525.1-201ENST00000585559 441 ntBASIC17.32■□□□□ 0.36
AP3S2P59780 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP3S2P59780 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.32■□□□□ 0.36
AP3S2P59780 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC17.32■□□□□ 0.36
AP3S2P59780 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.32■□□□□ 0.36
AP3S2P59780 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC17.32■□□□□ 0.36
AP3S2P59780 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP3S2P59780 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
AP3S2P59780 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP3S2P59780 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP3S2P59780 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP3S2P59780 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP3S2P59780 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
AP3S2P59780 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP3S2P59780 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP3S2P59780 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP3S2P59780 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
AP3S2P59780 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
AP3S2P59780 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.31■□□□□ 0.36
AP3S2P59780 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
AP3S2P59780 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
AP3S2P59780 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
AP3S2P59780 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.31■□□□□ 0.36
AP3S2P59780 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
AP3S2P59780 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.31■□□□□ 0.36
AP3S2P59780 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
AP3S2P59780 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
AP3S2P59780 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
AP3S2P59780 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
AP3S2P59780 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
AP3S2P59780 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
AP3S2P59780 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC17.31■□□□□ 0.36
AP3S2P59780 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
AP3S2P59780 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
AP3S2P59780 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.31■□□□□ 0.36
AP3S2P59780 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC17.31■□□□□ 0.36
AP3S2P59780 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.31■□□□□ 0.36
AP3S2P59780 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
AP3S2P59780 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
AP3S2P59780 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
AP3S2P59780 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms