Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
KCNA3P22001 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC25.01■■□□□ 1.59
KCNA3P22001 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC25.01■■□□□ 1.59
KCNA3P22001 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC25.01■■□□□ 1.59
KCNA3P22001 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
KCNA3P22001 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC25.01■■□□□ 1.59
KCNA3P22001 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
KCNA3P22001 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC25■■□□□ 1.59
KCNA3P22001 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC25■■□□□ 1.59
KCNA3P22001 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
KCNA3P22001 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
KCNA3P22001 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
KCNA3P22001 PRR31-201ENST00000371629 978 ntTSL 2 BASIC25■■□□□ 1.59
KCNA3P22001 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC25■■□□□ 1.59
KCNA3P22001 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC25■■□□□ 1.59
KCNA3P22001 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
KCNA3P22001 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC25■■□□□ 1.59
KCNA3P22001 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC25■■□□□ 1.59
KCNA3P22001 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC25■■□□□ 1.59
KCNA3P22001 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC25■■□□□ 1.59
KCNA3P22001 CLN6-221ENST00000637494 765 ntTSL 5 BASIC25■■□□□ 1.59
KCNA3P22001 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC25■■□□□ 1.59
KCNA3P22001 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
KCNA3P22001 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
KCNA3P22001 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC25■■□□□ 1.59
KCNA3P22001 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC25■■□□□ 1.59
KCNA3P22001 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC25■■□□□ 1.59
KCNA3P22001 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
KCNA3P22001 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
KCNA3P22001 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
KCNA3P22001 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
KCNA3P22001 KRT16P1-201ENST00000399124 1418 ntBASIC24.99■■□□□ 1.59
KCNA3P22001 MESTP1-201ENST00000404287 994 ntBASIC24.99■■□□□ 1.59
KCNA3P22001 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC24.99■■□□□ 1.59
KCNA3P22001 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC24.99■■□□□ 1.59
KCNA3P22001 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC24.99■■□□□ 1.59
KCNA3P22001 AL121906.2-201ENST00000621597 723 ntBASIC24.99■■□□□ 1.59
KCNA3P22001 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC24.99■■□□□ 1.59
KCNA3P22001 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
KCNA3P22001 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC24.98■■□□□ 1.59
KCNA3P22001 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
KCNA3P22001 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC24.98■■□□□ 1.59
KCNA3P22001 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
KCNA3P22001 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
KCNA3P22001 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC24.98■■□□□ 1.59
KCNA3P22001 ECEL1P2-202ENST00000465689 757 ntBASIC24.98■■□□□ 1.59
KCNA3P22001 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC24.98■■□□□ 1.59
KCNA3P22001 METTL23-204ENST00000586752 904 ntTSL 2 BASIC24.98■■□□□ 1.59
KCNA3P22001 AC091076.1-201ENST00000610741 619 ntBASIC24.98■■□□□ 1.59
KCNA3P22001 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC24.98■■□□□ 1.59
KCNA3P22001 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC24.98■■□□□ 1.59
KCNA3P22001 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
KCNA3P22001 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC24.98■■□□□ 1.59
KCNA3P22001 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
KCNA3P22001 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
KCNA3P22001 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC24.98■■□□□ 1.59
KCNA3P22001 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
KCNA3P22001 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
KCNA3P22001 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC24.97■■□□□ 1.59
KCNA3P22001 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC24.97■■□□□ 1.59
KCNA3P22001 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC24.97■■□□□ 1.59
KCNA3P22001 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
KCNA3P22001 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
KCNA3P22001 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
KCNA3P22001 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC24.97■■□□□ 1.59
KCNA3P22001 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
KCNA3P22001 TPM4P1-201ENST00000436100 807 ntBASIC24.97■■□□□ 1.59
KCNA3P22001 AC063952.2-201ENST00000498792 1227 ntBASIC24.97■■□□□ 1.59
KCNA3P22001 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
KCNA3P22001 KRT126P-201ENST00000549467 1181 ntBASIC24.97■■□□□ 1.59
KCNA3P22001 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC24.97■■□□□ 1.59
KCNA3P22001 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC24.97■■□□□ 1.59
KCNA3P22001 MYC-208ENST00000641036 567 ntBASIC24.97■■□□□ 1.59
KCNA3P22001 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
KCNA3P22001 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
KCNA3P22001 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
KCNA3P22001 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
KCNA3P22001 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC24.96■■□□□ 1.59
KCNA3P22001 AC027702.1-201ENST00000563810 1770 ntBASIC24.96■■□□□ 1.59
KCNA3P22001 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC24.96■■□□□ 1.59
KCNA3P22001 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC24.96■■□□□ 1.59
KCNA3P22001 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC24.96■■□□□ 1.59
KCNA3P22001 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
KCNA3P22001 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC24.95■■□□□ 1.59
KCNA3P22001 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC24.95■■□□□ 1.59
KCNA3P22001 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC24.95■■□□□ 1.59
KCNA3P22001 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
KCNA3P22001 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
KCNA3P22001 CRYGFP-201ENST00000418459 633 ntBASIC24.95■■□□□ 1.58
KCNA3P22001 LIN28AP1-201ENST00000429574 405 ntBASIC24.95■■□□□ 1.58
KCNA3P22001 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC24.95■■□□□ 1.58
KCNA3P22001 AC022616.7-201ENST00000525383 220 ntBASIC24.95■■□□□ 1.58
KCNA3P22001 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC24.95■■□□□ 1.58
KCNA3P22001 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC24.95■■□□□ 1.58
KCNA3P22001 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
KCNA3P22001 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC24.95■■□□□ 1.58
KCNA3P22001 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC24.94■■□□□ 1.58
KCNA3P22001 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC24.94■■□□□ 1.58
KCNA3P22001 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC24.94■■□□□ 1.58
KCNA3P22001 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC24.94■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms