Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
COL5A2P05997 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC26.86■■□□□ 1.89
COL5A2P05997 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC26.86■■□□□ 1.89
COL5A2P05997 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC26.86■■□□□ 1.89
COL5A2P05997 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC26.86■■□□□ 1.89
COL5A2P05997 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
COL5A2P05997 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
COL5A2P05997 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC26.86■■□□□ 1.89
COL5A2P05997 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
COL5A2P05997 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC26.85■■□□□ 1.89
COL5A2P05997 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC26.85■■□□□ 1.89
COL5A2P05997 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC26.85■■□□□ 1.89
COL5A2P05997 KRT18P22-201ENST00000402024 1347 ntBASIC26.85■■□□□ 1.89
COL5A2P05997 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC26.85■■□□□ 1.89
COL5A2P05997 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC26.85■■□□□ 1.89
COL5A2P05997 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC26.85■■□□□ 1.89
COL5A2P05997 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC26.85■■□□□ 1.89
COL5A2P05997 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC26.85■■□□□ 1.89
COL5A2P05997 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC26.85■■□□□ 1.89
COL5A2P05997 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
COL5A2P05997 AC011484.1-201ENST00000377652 1995 ntBASIC26.85■■□□□ 1.89
COL5A2P05997 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
COL5A2P05997 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC26.85■■□□□ 1.89
COL5A2P05997 PALM-207ENST00000590161 2137 ntTSL 4 BASIC26.85■■□□□ 1.89
COL5A2P05997 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC26.84■■□□□ 1.89
COL5A2P05997 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC26.84■■□□□ 1.89
COL5A2P05997 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC26.84■■□□□ 1.89
COL5A2P05997 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC26.84■■□□□ 1.89
COL5A2P05997 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC26.84■■□□□ 1.89
COL5A2P05997 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC26.84■■□□□ 1.89
COL5A2P05997 KRT16P1-201ENST00000399124 1418 ntBASIC26.84■■□□□ 1.89
COL5A2P05997 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC26.84■■□□□ 1.89
COL5A2P05997 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
COL5A2P05997 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
COL5A2P05997 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC26.84■■□□□ 1.89
COL5A2P05997 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
COL5A2P05997 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
COL5A2P05997 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC26.83■■□□□ 1.89
COL5A2P05997 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC26.83■■□□□ 1.89
COL5A2P05997 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC26.83■■□□□ 1.89
COL5A2P05997 KSR1P1-201ENST00000446298 240 ntBASIC26.83■■□□□ 1.89
COL5A2P05997 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC26.83■■□□□ 1.89
COL5A2P05997 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC26.83■■□□□ 1.89
COL5A2P05997 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC26.83■■□□□ 1.89
COL5A2P05997 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC26.83■■□□□ 1.89
COL5A2P05997 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC26.83■■□□□ 1.89
COL5A2P05997 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC26.83■■□□□ 1.89
COL5A2P05997 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.88
COL5A2P05997 ME2-208ENST00000638937 2471 ntTSL 5 BASIC26.82■■□□□ 1.88
COL5A2P05997 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
COL5A2P05997 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC26.82■■□□□ 1.88
COL5A2P05997 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
COL5A2P05997 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
COL5A2P05997 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
COL5A2P05997 AL137013.1-201ENST00000432946 1228 ntBASIC26.82■■□□□ 1.88
COL5A2P05997 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC26.82■■□□□ 1.88
COL5A2P05997 TMA16-209ENST00000513272 803 ntTSL 2 BASIC26.82■■□□□ 1.88
COL5A2P05997 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC26.82■■□□□ 1.88
COL5A2P05997 NTF6B-201ENST00000591913 560 ntBASIC26.82■■□□□ 1.88
COL5A2P05997 MIR2861-201ENST00000636310 90 ntBASIC26.82■■□□□ 1.88
COL5A2P05997 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC26.82■■□□□ 1.88
COL5A2P05997 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
COL5A2P05997 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC26.82■■□□□ 1.88
COL5A2P05997 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
COL5A2P05997 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
COL5A2P05997 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC26.82■■□□□ 1.88
COL5A2P05997 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC26.82■■□□□ 1.88
COL5A2P05997 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
COL5A2P05997 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
COL5A2P05997 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC26.82■■□□□ 1.88
COL5A2P05997 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
COL5A2P05997 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
COL5A2P05997 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
COL5A2P05997 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC26.81■■□□□ 1.88
COL5A2P05997 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
COL5A2P05997 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC26.81■■□□□ 1.88
COL5A2P05997 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
COL5A2P05997 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC26.81■■□□□ 1.88
COL5A2P05997 AC006011.2-201ENST00000621313 1158 ntBASIC26.81■■□□□ 1.88
COL5A2P05997 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
COL5A2P05997 AC242852.2-201ENST00000615738 1807 ntBASIC26.81■■□□□ 1.88
COL5A2P05997 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
COL5A2P05997 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
COL5A2P05997 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC26.81■■□□□ 1.88
COL5A2P05997 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC26.81■■□□□ 1.88
COL5A2P05997 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC26.81■■□□□ 1.88
COL5A2P05997 PTBP1P-201ENST00000554374 1601 ntBASIC26.81■■□□□ 1.88
COL5A2P05997 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC26.81■■□□□ 1.88
COL5A2P05997 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
COL5A2P05997 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
COL5A2P05997 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC26.81■■□□□ 1.88
COL5A2P05997 AC010203.1-204ENST00000548782 407 ntBASIC26.81■■□□□ 1.88
COL5A2P05997 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC26.8■■□□□ 1.88
COL5A2P05997 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC26.8■■□□□ 1.88
COL5A2P05997 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
COL5A2P05997 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
COL5A2P05997 AC027702.1-201ENST00000563810 1770 ntBASIC26.8■■□□□ 1.88
COL5A2P05997 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
COL5A2P05997 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
COL5A2P05997 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC26.8■■□□□ 1.88
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms