Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
MT-ND3P03897 AC004854.2-201ENST00000608450 1441 ntBASIC20.54■□□□□ 0.88
MT-ND3P03897 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
MT-ND3P03897 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
MT-ND3P03897 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
MT-ND3P03897 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
MT-ND3P03897 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.54■□□□□ 0.88
MT-ND3P03897 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
MT-ND3P03897 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.54■□□□□ 0.88
MT-ND3P03897 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
MT-ND3P03897 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
MT-ND3P03897 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
MT-ND3P03897 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
MT-ND3P03897 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.54■□□□□ 0.88
MT-ND3P03897 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
MT-ND3P03897 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
MT-ND3P03897 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
MT-ND3P03897 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
MT-ND3P03897 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
MT-ND3P03897 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
MT-ND3P03897 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
MT-ND3P03897 RNF165-205ENST00000588679 2904 ntBASIC20.53■□□□□ 0.88
MT-ND3P03897 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
MT-ND3P03897 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.53■□□□□ 0.88
MT-ND3P03897 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.53■□□□□ 0.88
MT-ND3P03897 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.53■□□□□ 0.88
MT-ND3P03897 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.53■□□□□ 0.88
MT-ND3P03897 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.53■□□□□ 0.88
MT-ND3P03897 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
MT-ND3P03897 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MT-ND3P03897 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
MT-ND3P03897 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MT-ND3P03897 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
MT-ND3P03897 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
MT-ND3P03897 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
MT-ND3P03897 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.52■□□□□ 0.88
MT-ND3P03897 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
MT-ND3P03897 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
MT-ND3P03897 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.52■□□□□ 0.88
MT-ND3P03897 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
MT-ND3P03897 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.52■□□□□ 0.88
MT-ND3P03897 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.52■□□□□ 0.88
MT-ND3P03897 BID-214ENST00000617586 542 ntTSL 5 BASIC20.52■□□□□ 0.88
MT-ND3P03897 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
MT-ND3P03897 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.52■□□□□ 0.88
MT-ND3P03897 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.52■□□□□ 0.88
MT-ND3P03897 TCF3P1-201ENST00000423021 1937 ntBASIC20.52■□□□□ 0.88
MT-ND3P03897 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.52■□□□□ 0.88
MT-ND3P03897 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
MT-ND3P03897 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
MT-ND3P03897 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.52■□□□□ 0.88
MT-ND3P03897 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
MT-ND3P03897 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
MT-ND3P03897 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.52■□□□□ 0.87
MT-ND3P03897 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
MT-ND3P03897 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
MT-ND3P03897 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.51■□□□□ 0.87
MT-ND3P03897 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.51■□□□□ 0.87
MT-ND3P03897 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
MT-ND3P03897 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
MT-ND3P03897 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MT-ND3P03897 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.51■□□□□ 0.87
MT-ND3P03897 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.51■□□□□ 0.87
MT-ND3P03897 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.51■□□□□ 0.87
MT-ND3P03897 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MT-ND3P03897 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.51■□□□□ 0.87
MT-ND3P03897 KRT18P61-201ENST00000585825 1298 ntBASIC20.51■□□□□ 0.87
MT-ND3P03897 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.51■□□□□ 0.87
MT-ND3P03897 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
MT-ND3P03897 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MT-ND3P03897 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MT-ND3P03897 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MT-ND3P03897 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
MT-ND3P03897 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
MT-ND3P03897 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MT-ND3P03897 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
MT-ND3P03897 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
MT-ND3P03897 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.5■□□□□ 0.87
MT-ND3P03897 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.5■□□□□ 0.87
MT-ND3P03897 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.5■□□□□ 0.87
MT-ND3P03897 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.5■□□□□ 0.87
MT-ND3P03897 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.5■□□□□ 0.87
MT-ND3P03897 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
MT-ND3P03897 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MT-ND3P03897 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
MT-ND3P03897 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
MT-ND3P03897 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
MT-ND3P03897 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MT-ND3P03897 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
MT-ND3P03897 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MT-ND3P03897 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MT-ND3P03897 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
MT-ND3P03897 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.49■□□□□ 0.87
MT-ND3P03897 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.49■□□□□ 0.87
MT-ND3P03897 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
MT-ND3P03897 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.49■□□□□ 0.87
MT-ND3P03897 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
MT-ND3P03897 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
MT-ND3P03897 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.49■□□□□ 0.87
MT-ND3P03897 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms