Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAF3IP2O43734 KRT17P1-201ENST00000399211 1546 ntBASIC18.03■□□□□ 0.48
TRAF3IP2O43734 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRAF3IP2O43734 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAF3IP2O43734 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.03■□□□□ 0.48
TRAF3IP2O43734 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAF3IP2O43734 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRAF3IP2O43734 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
TRAF3IP2O43734 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAF3IP2O43734 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.03■□□□□ 0.48
TRAF3IP2O43734 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAF3IP2O43734 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAF3IP2O43734 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAF3IP2O43734 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.03■□□□□ 0.48
TRAF3IP2O43734 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.03■□□□□ 0.48
TRAF3IP2O43734 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.03■□□□□ 0.48
TRAF3IP2O43734 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.03■□□□□ 0.48
TRAF3IP2O43734 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.03■□□□□ 0.48
TRAF3IP2O43734 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
TRAF3IP2O43734 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.03■□□□□ 0.48
TRAF3IP2O43734 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAF3IP2O43734 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
TRAF3IP2O43734 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.03■□□□□ 0.48
TRAF3IP2O43734 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRAF3IP2O43734 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAF3IP2O43734 MKRN4P-201ENST00000444706 1521 ntBASIC18.03■□□□□ 0.48
TRAF3IP2O43734 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.03■□□□□ 0.48
TRAF3IP2O43734 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRAF3IP2O43734 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRAF3IP2O43734 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRAF3IP2O43734 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRAF3IP2O43734 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
TRAF3IP2O43734 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRAF3IP2O43734 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.02■□□□□ 0.48
TRAF3IP2O43734 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
TRAF3IP2O43734 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRAF3IP2O43734 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRAF3IP2O43734 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRAF3IP2O43734 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
TRAF3IP2O43734 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TRAF3IP2O43734 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
TRAF3IP2O43734 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
TRAF3IP2O43734 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TRAF3IP2O43734 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.02■□□□□ 0.48
TRAF3IP2O43734 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.02■□□□□ 0.48
TRAF3IP2O43734 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18.02■□□□□ 0.48
TRAF3IP2O43734 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.02■□□□□ 0.48
TRAF3IP2O43734 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRAF3IP2O43734 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.02■□□□□ 0.48
TRAF3IP2O43734 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRAF3IP2O43734 AL121832.2-201ENST00000610979 668 ntBASIC18.02■□□□□ 0.48
TRAF3IP2O43734 AL589743.5-201ENST00000616611 1050 ntBASIC18.02■□□□□ 0.48
TRAF3IP2O43734 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRAF3IP2O43734 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
TRAF3IP2O43734 DPP3P2-201ENST00000416030 1696 ntBASIC18.02■□□□□ 0.47
TRAF3IP2O43734 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.02■□□□□ 0.47
TRAF3IP2O43734 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRAF3IP2O43734 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRAF3IP2O43734 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRAF3IP2O43734 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
TRAF3IP2O43734 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRAF3IP2O43734 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.02■□□□□ 0.47
TRAF3IP2O43734 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRAF3IP2O43734 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.01■□□□□ 0.47
TRAF3IP2O43734 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.01■□□□□ 0.47
TRAF3IP2O43734 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
TRAF3IP2O43734 SMG8-203ENST00000578922 2178 ntBASIC18.01■□□□□ 0.47
TRAF3IP2O43734 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRAF3IP2O43734 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRAF3IP2O43734 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRAF3IP2O43734 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRAF3IP2O43734 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.01■□□□□ 0.47
TRAF3IP2O43734 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRAF3IP2O43734 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.01■□□□□ 0.47
TRAF3IP2O43734 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
TRAF3IP2O43734 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.01■□□□□ 0.47
TRAF3IP2O43734 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRAF3IP2O43734 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRAF3IP2O43734 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
TRAF3IP2O43734 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.01■□□□□ 0.47
TRAF3IP2O43734 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
TRAF3IP2O43734 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
TRAF3IP2O43734 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRAF3IP2O43734 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
TRAF3IP2O43734 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRAF3IP2O43734 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18■□□□□ 0.47
TRAF3IP2O43734 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
TRAF3IP2O43734 AC073130.3-201ENST00000624389 2278 ntBASIC18■□□□□ 0.47
TRAF3IP2O43734 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRAF3IP2O43734 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
TRAF3IP2O43734 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRAF3IP2O43734 NCF1B-203ENST00000435988 1254 ntBASIC18■□□□□ 0.47
TRAF3IP2O43734 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18■□□□□ 0.47
TRAF3IP2O43734 AC083906.2-201ENST00000511578 360 ntBASIC18■□□□□ 0.47
TRAF3IP2O43734 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18■□□□□ 0.47
TRAF3IP2O43734 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18■□□□□ 0.47
TRAF3IP2O43734 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18■□□□□ 0.47
TRAF3IP2O43734 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRAF3IP2O43734 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18■□□□□ 0.47
TRAF3IP2O43734 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms