Protein–RNA interactions for Protein: O15269

SPTLC1, Serine palmitoyltransferase 1, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1O15269 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC21.67■■□□□ 1.06
SPTLC1O15269 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SPTLC1O15269 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SPTLC1O15269 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SPTLC1O15269 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SPTLC1O15269 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SPTLC1O15269 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC21.66■■□□□ 1.06
SPTLC1O15269 AL596275.1-201ENST00000423464 877 ntBASIC21.66■■□□□ 1.06
SPTLC1O15269 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SPTLC1O15269 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC21.66■■□□□ 1.06
SPTLC1O15269 AC233263.1-201ENST00000578059 224 ntBASIC21.66■■□□□ 1.06
SPTLC1O15269 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SPTLC1O15269 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
SPTLC1O15269 BID-203ENST00000399765 1879 ntTSL 2 BASIC21.66■■□□□ 1.06
SPTLC1O15269 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SPTLC1O15269 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SPTLC1O15269 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SPTLC1O15269 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SPTLC1O15269 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SPTLC1O15269 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
SPTLC1O15269 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SPTLC1O15269 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SPTLC1O15269 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
SPTLC1O15269 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
SPTLC1O15269 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SPTLC1O15269 GGT1-206ENST00000404223 952 ntTSL 2 BASIC21.65■■□□□ 1.06
SPTLC1O15269 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC21.65■■□□□ 1.06
SPTLC1O15269 AC005829.2-201ENST00000571422 1056 ntBASIC21.65■■□□□ 1.06
SPTLC1O15269 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SPTLC1O15269 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SPTLC1O15269 AC006557.6-201ENST00000623071 864 ntBASIC21.65■■□□□ 1.06
SPTLC1O15269 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC21.65■■□□□ 1.06
SPTLC1O15269 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
SPTLC1O15269 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC21.65■■□□□ 1.06
SPTLC1O15269 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.65■■□□□ 1.06
SPTLC1O15269 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC21.65■■□□□ 1.06
SPTLC1O15269 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
SPTLC1O15269 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.64■■□□□ 1.06
SPTLC1O15269 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
SPTLC1O15269 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
SPTLC1O15269 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC21.64■■□□□ 1.06
SPTLC1O15269 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SPTLC1O15269 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC21.64■■□□□ 1.05
SPTLC1O15269 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
SPTLC1O15269 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SPTLC1O15269 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
SPTLC1O15269 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SPTLC1O15269 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC21.64■■□□□ 1.05
SPTLC1O15269 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SPTLC1O15269 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SPTLC1O15269 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC21.64■■□□□ 1.05
SPTLC1O15269 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
SPTLC1O15269 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC21.64■■□□□ 1.05
SPTLC1O15269 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
SPTLC1O15269 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC21.64■■□□□ 1.05
SPTLC1O15269 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC21.64■■□□□ 1.05
SPTLC1O15269 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC21.64■■□□□ 1.05
SPTLC1O15269 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SPTLC1O15269 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC21.64■■□□□ 1.05
SPTLC1O15269 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SPTLC1O15269 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC21.64■■□□□ 1.05
SPTLC1O15269 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC21.64■■□□□ 1.05
SPTLC1O15269 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SPTLC1O15269 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SPTLC1O15269 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SPTLC1O15269 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
SPTLC1O15269 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC21.63■■□□□ 1.05
SPTLC1O15269 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
SPTLC1O15269 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SPTLC1O15269 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SPTLC1O15269 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SPTLC1O15269 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SPTLC1O15269 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SPTLC1O15269 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC21.63■■□□□ 1.05
SPTLC1O15269 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC21.63■■□□□ 1.05
SPTLC1O15269 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
SPTLC1O15269 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC21.63■■□□□ 1.05
SPTLC1O15269 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC21.63■■□□□ 1.05
SPTLC1O15269 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
SPTLC1O15269 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
SPTLC1O15269 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SPTLC1O15269 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SPTLC1O15269 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SPTLC1O15269 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SPTLC1O15269 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC21.63■■□□□ 1.05
SPTLC1O15269 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
SPTLC1O15269 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
SPTLC1O15269 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SPTLC1O15269 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
SPTLC1O15269 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SPTLC1O15269 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SPTLC1O15269 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SPTLC1O15269 MMD2-204ENST00000612910 778 ntTSL 5 BASIC21.62■■□□□ 1.05
SPTLC1O15269 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
SPTLC1O15269 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SPTLC1O15269 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
SPTLC1O15269 PTBP1P-201ENST00000554374 1601 ntBASIC21.62■■□□□ 1.05
SPTLC1O15269 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SPTLC1O15269 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC21.62■■□□□ 1.05
SPTLC1O15269 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms