Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 NMU-205ENST00000511469 756 ntTSL 3 BASIC28.42■■■□□ 2.14
CHD2O14647 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
CHD2O14647 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC28.42■■■□□ 2.14
CHD2O14647 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC28.42■■■□□ 2.14
CHD2O14647 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC28.42■■■□□ 2.14
CHD2O14647 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC28.41■■■□□ 2.14
CHD2O14647 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC28.41■■■□□ 2.14
CHD2O14647 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
CHD2O14647 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC28.41■■■□□ 2.14
CHD2O14647 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC28.41■■■□□ 2.14
CHD2O14647 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC28.41■■■□□ 2.14
CHD2O14647 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC28.41■■■□□ 2.14
CHD2O14647 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC28.41■■■□□ 2.14
CHD2O14647 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC28.41■■■□□ 2.14
CHD2O14647 MIR2861-201ENST00000636310 90 ntBASIC28.41■■■□□ 2.14
CHD2O14647 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC28.41■■■□□ 2.14
CHD2O14647 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC28.41■■■□□ 2.14
CHD2O14647 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
CHD2O14647 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC28.41■■■□□ 2.14
CHD2O14647 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC28.41■■■□□ 2.14
CHD2O14647 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC28.41■■■□□ 2.14
CHD2O14647 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC28.41■■■□□ 2.14
CHD2O14647 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
CHD2O14647 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
CHD2O14647 AC027702.1-201ENST00000563810 1770 ntBASIC28.4■■■□□ 2.14
CHD2O14647 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
CHD2O14647 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC28.4■■■□□ 2.14
CHD2O14647 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC28.4■■■□□ 2.14
CHD2O14647 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC28.4■■■□□ 2.14
CHD2O14647 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC28.4■■■□□ 2.14
CHD2O14647 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC28.4■■■□□ 2.14
CHD2O14647 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
CHD2O14647 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC28.4■■■□□ 2.14
CHD2O14647 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
CHD2O14647 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC28.39■■■□□ 2.14
CHD2O14647 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC28.39■■■□□ 2.14
CHD2O14647 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC28.39■■■□□ 2.14
CHD2O14647 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC28.39■■■□□ 2.14
CHD2O14647 AC026271.3-201ENST00000571884 352 ntBASIC28.39■■■□□ 2.14
CHD2O14647 CR392000.1-201ENST00000624770 1228 ntBASIC28.39■■■□□ 2.14
CHD2O14647 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC28.39■■■□□ 2.14
CHD2O14647 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
CHD2O14647 STK25-205ENST00000405883 1904 ntTSL 2 BASIC28.39■■■□□ 2.14
CHD2O14647 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC28.39■■■□□ 2.13
CHD2O14647 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
CHD2O14647 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC28.39■■■□□ 2.13
CHD2O14647 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC28.39■■■□□ 2.13
CHD2O14647 MESTP1-201ENST00000404287 994 ntBASIC28.39■■■□□ 2.13
CHD2O14647 CRYGFP-201ENST00000418459 633 ntBASIC28.39■■■□□ 2.13
CHD2O14647 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC28.39■■■□□ 2.13
CHD2O14647 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC28.39■■■□□ 2.13
CHD2O14647 C1QL1P1-201ENST00000568105 661 ntBASIC28.39■■■□□ 2.13
CHD2O14647 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
CHD2O14647 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
CHD2O14647 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
CHD2O14647 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
CHD2O14647 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC28.38■■■□□ 2.13
CHD2O14647 PRR31-201ENST00000371629 978 ntTSL 2 BASIC28.38■■■□□ 2.13
CHD2O14647 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC28.38■■■□□ 2.13
CHD2O14647 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC28.38■■■□□ 2.13
CHD2O14647 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC28.38■■■□□ 2.13
CHD2O14647 TOLLIP-AS1-201ENST00000530897 939 ntBASIC28.38■■■□□ 2.13
CHD2O14647 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC28.38■■■□□ 2.13
CHD2O14647 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC28.38■■■□□ 2.13
CHD2O14647 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC28.37■■■□□ 2.13
CHD2O14647 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC28.37■■■□□ 2.13
CHD2O14647 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
CHD2O14647 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC28.37■■■□□ 2.13
CHD2O14647 UPK3BP1-201ENST00000428678 509 ntBASIC28.37■■■□□ 2.13
CHD2O14647 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC28.37■■■□□ 2.13
CHD2O14647 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
CHD2O14647 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
CHD2O14647 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
CHD2O14647 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC28.37■■■□□ 2.13
CHD2O14647 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
CHD2O14647 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC28.36■■■□□ 2.13
CHD2O14647 CLN6-221ENST00000637494 765 ntTSL 5 BASIC28.36■■■□□ 2.13
CHD2O14647 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC28.36■■■□□ 2.13
CHD2O14647 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
CHD2O14647 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC28.36■■■□□ 2.13
CHD2O14647 PTBP1P-201ENST00000554374 1601 ntBASIC28.36■■■□□ 2.13
CHD2O14647 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
CHD2O14647 LGALS8-AS1-201ENST00000487567 1457 ntBASIC28.36■■■□□ 2.13
CHD2O14647 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
CHD2O14647 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
CHD2O14647 ECEL1P2-202ENST00000465689 757 ntBASIC28.36■■■□□ 2.13
CHD2O14647 DGCR10-201ENST00000609839 495 ntBASIC28.36■■■□□ 2.13
CHD2O14647 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC28.36■■■□□ 2.13
CHD2O14647 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
CHD2O14647 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
CHD2O14647 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
CHD2O14647 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC28.35■■■□□ 2.13
CHD2O14647 GUK1-204ENST00000366721 689 ntTSL 3 BASIC28.35■■■□□ 2.13
CHD2O14647 AC063952.2-201ENST00000498792 1227 ntBASIC28.35■■■□□ 2.13
CHD2O14647 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
CHD2O14647 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC28.35■■■□□ 2.13
CHD2O14647 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
CHD2O14647 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC28.35■■■□□ 2.13
CHD2O14647 MFF-203ENST00000349901 1716 ntTSL 2 BASIC28.34■■■□□ 2.13
CHD2O14647 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms