Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 AC104771.1-201ENST00000603335 964 ntBASIC19.25■□□□□ 0.67
LRIT2A6NDA9 AC092118.2-201ENST00000613495 667 ntBASIC19.25■□□□□ 0.67
LRIT2A6NDA9 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
LRIT2A6NDA9 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.25■□□□□ 0.67
LRIT2A6NDA9 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.25■□□□□ 0.67
LRIT2A6NDA9 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.25■□□□□ 0.67
LRIT2A6NDA9 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.25■□□□□ 0.67
LRIT2A6NDA9 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRIT2A6NDA9 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRIT2A6NDA9 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRIT2A6NDA9 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRIT2A6NDA9 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
LRIT2A6NDA9 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LRIT2A6NDA9 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
LRIT2A6NDA9 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRIT2A6NDA9 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
LRIT2A6NDA9 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.24■□□□□ 0.67
LRIT2A6NDA9 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
LRIT2A6NDA9 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.24■□□□□ 0.67
LRIT2A6NDA9 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
LRIT2A6NDA9 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.24■□□□□ 0.67
LRIT2A6NDA9 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
LRIT2A6NDA9 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LRIT2A6NDA9 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.24■□□□□ 0.67
LRIT2A6NDA9 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LRIT2A6NDA9 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LRIT2A6NDA9 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
LRIT2A6NDA9 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LRIT2A6NDA9 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.23■□□□□ 0.67
LRIT2A6NDA9 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LRIT2A6NDA9 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
LRIT2A6NDA9 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC19.23■□□□□ 0.67
LRIT2A6NDA9 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.23■□□□□ 0.67
LRIT2A6NDA9 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LRIT2A6NDA9 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.23■□□□□ 0.67
LRIT2A6NDA9 MIR4758-201ENST00000577688 71 ntBASIC19.23■□□□□ 0.67
LRIT2A6NDA9 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.23■□□□□ 0.67
LRIT2A6NDA9 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.23■□□□□ 0.67
LRIT2A6NDA9 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
LRIT2A6NDA9 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.23■□□□□ 0.67
LRIT2A6NDA9 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LRIT2A6NDA9 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LRIT2A6NDA9 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
LRIT2A6NDA9 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.23■□□□□ 0.67
LRIT2A6NDA9 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
LRIT2A6NDA9 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LRIT2A6NDA9 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.23■□□□□ 0.67
LRIT2A6NDA9 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.23■□□□□ 0.67
LRIT2A6NDA9 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
LRIT2A6NDA9 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRIT2A6NDA9 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRIT2A6NDA9 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRIT2A6NDA9 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LRIT2A6NDA9 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRIT2A6NDA9 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRIT2A6NDA9 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
LRIT2A6NDA9 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.22■□□□□ 0.67
LRIT2A6NDA9 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.22■□□□□ 0.67
LRIT2A6NDA9 AL138781.1-201ENST00000566567 1274 ntBASIC19.22■□□□□ 0.67
LRIT2A6NDA9 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.22■□□□□ 0.67
LRIT2A6NDA9 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.22■□□□□ 0.67
LRIT2A6NDA9 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.22■□□□□ 0.67
LRIT2A6NDA9 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19.22■□□□□ 0.67
LRIT2A6NDA9 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
LRIT2A6NDA9 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.22■□□□□ 0.67
LRIT2A6NDA9 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
LRIT2A6NDA9 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LRIT2A6NDA9 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
LRIT2A6NDA9 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRIT2A6NDA9 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRIT2A6NDA9 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.21■□□□□ 0.67
LRIT2A6NDA9 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
LRIT2A6NDA9 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
LRIT2A6NDA9 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.21■□□□□ 0.67
LRIT2A6NDA9 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.21■□□□□ 0.67
LRIT2A6NDA9 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.21■□□□□ 0.67
LRIT2A6NDA9 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRIT2A6NDA9 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRIT2A6NDA9 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRIT2A6NDA9 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LRIT2A6NDA9 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRIT2A6NDA9 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.21■□□□□ 0.67
LRIT2A6NDA9 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
LRIT2A6NDA9 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.21■□□□□ 0.67
LRIT2A6NDA9 HLA-L-209ENST00000420110 1011 ntBASIC19.21■□□□□ 0.67
LRIT2A6NDA9 DUSP5P2-201ENST00000426873 1033 ntBASIC19.21■□□□□ 0.67
LRIT2A6NDA9 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
LRIT2A6NDA9 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.21■□□□□ 0.67
LRIT2A6NDA9 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.21■□□□□ 0.67
LRIT2A6NDA9 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.21■□□□□ 0.67
LRIT2A6NDA9 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRIT2A6NDA9 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.21■□□□□ 0.67
LRIT2A6NDA9 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LRIT2A6NDA9 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRIT2A6NDA9 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRIT2A6NDA9 PTBP1P-201ENST00000554374 1601 ntBASIC19.21■□□□□ 0.67
LRIT2A6NDA9 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.21■□□□□ 0.67
LRIT2A6NDA9 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRIT2A6NDA9 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
LRIT2A6NDA9 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms