Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 MAGEB16-205ENST00000399992 1734 ntAPPRIS ALT2 TSL 5 BASIC8.49□□□□□ -1.05
LMO3Q8TAP4 SPATS2L-201ENST00000358677 6156 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
LMO3Q8TAP4 ZNF2-204ENST00000617923 3885 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
LMO3Q8TAP4 AC079061.1-201ENST00000499579 3075 ntTSL 2 BASIC8.49□□□□□ -1.05
LMO3Q8TAP4 LPIN1-207ENST00000425416 5582 ntTSL 2 BASIC8.49□□□□□ -1.05
LMO3Q8TAP4 AC007388.1-201ENST00000426083 1438 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
LMO3Q8TAP4 EEF1A1P2-201ENST00000553854 1447 ntBASIC8.49□□□□□ -1.05
LMO3Q8TAP4 SP4-201ENST00000222584 6126 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
LMO3Q8TAP4 NHLRC3-201ENST00000379599 3275 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
LMO3Q8TAP4 ZNF396-201ENST00000306346 2788 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
LMO3Q8TAP4 TMEM52B-203ENST00000381923 2601 ntAPPRIS ALT2 TSL 5 BASIC8.49□□□□□ -1.05
LMO3Q8TAP4 CYFIP2-210ENST00000522463 3477 ntTSL 2 BASIC8.49□□□□□ -1.05
LMO3Q8TAP4 DEFB105B-201ENST00000335510 331 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
LMO3Q8TAP4 BTF3-201ENST00000335895 897 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
LMO3Q8TAP4 RNA5SP378-201ENST00000363646 120 ntBASIC8.49□□□□□ -1.05
LMO3Q8TAP4 PAGE5-203ENST00000374955 540 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
LMO3Q8TAP4 H2AFZP3-201ENST00000394213 387 ntBASIC8.49□□□□□ -1.05
LMO3Q8TAP4 NPM1P46-201ENST00000399556 865 ntBASIC8.49□□□□□ -1.05
LMO3Q8TAP4 RFKP1-201ENST00000400940 428 ntBASIC8.49□□□□□ -1.05
LMO3Q8TAP4 AL590143.1-201ENST00000405071 138 ntBASIC8.49□□□□□ -1.05
LMO3Q8TAP4 ST13P13-201ENST00000417082 1092 ntBASIC8.49□□□□□ -1.05
LMO3Q8TAP4 ZEB2-AS1-201ENST00000421083 453 ntTSL 2 BASIC8.49□□□□□ -1.05
LMO3Q8TAP4 RBMY2YP-201ENST00000423333 912 ntBASIC8.49□□□□□ -1.05
LMO3Q8TAP4 LINC01829-202ENST00000433133 2100 ntTSL 2 BASIC8.49□□□□□ -1.05
LMO3Q8TAP4 AC007919.2-201ENST00000444110 511 ntBASIC8.49□□□□□ -1.05
LMO3Q8TAP4 OR7A15P-201ENST00000449848 1009 ntBASIC8.49□□□□□ -1.05
LMO3Q8TAP4 LINC01888-202ENST00000457602 574 ntTSL 2 BASIC8.49□□□□□ -1.05
LMO3Q8TAP4 PPP4R2-207ENST00000495566 559 ntTSL 3 BASIC8.49□□□□□ -1.05
LMO3Q8TAP4 LINC02024-203ENST00000496994 489 ntTSL 3 BASIC8.49□□□□□ -1.05
LMO3Q8TAP4 CA1-219ENST00000523022 1208 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
LMO3Q8TAP4 C11orf65-203ENST00000525729 1263 ntTSL 2 BASIC8.49□□□□□ -1.05
LMO3Q8TAP4 STH-201ENST00000537309 445 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
LMO3Q8TAP4 AC084816.1-211ENST00000540994 485 ntTSL 3 BASIC8.49□□□□□ -1.05
LMO3Q8TAP4 PRPSAP2-217ENST00000542013 1047 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
LMO3Q8TAP4 AC244131.1-201ENST00000542152 922 ntBASIC8.49□□□□□ -1.05
LMO3Q8TAP4 AC006115.1-201ENST00000599726 517 ntTSL 5 BASIC8.49□□□□□ -1.05
LMO3Q8TAP4 GSTTP1-204ENST00000621179 920 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
LMO3Q8TAP4 SLC9A6-213ENST00000637234 4691 ntTSL 5 BASIC8.49□□□□□ -1.05
LMO3Q8TAP4 SIPA1L1-211ENST00000555818 7831 ntAPPRIS P3 TSL 1 (best) BASIC8.49□□□□□ -1.05
LMO3Q8TAP4 PSD3-203ENST00000428502 6330 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
LMO3Q8TAP4 CASC20-201ENST00000415932 1484 ntTSL 5 BASIC8.49□□□□□ -1.05
LMO3Q8TAP4 PHF2P2-202ENST00000444553 2865 ntBASIC8.49□□□□□ -1.05
LMO3Q8TAP4 GUCY2GP-201ENST00000479705 3222 ntBASIC8.49□□□□□ -1.05
LMO3Q8TAP4 RIOK2-201ENST00000283109 3922 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
LMO3Q8TAP4 OR2A1-202ENST00000641044 4632 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
LMO3Q8TAP4 AC127502.2-201ENST00000602663 2351 ntBASIC8.49□□□□□ -1.05
LMO3Q8TAP4 RBBP4-206ENST00000458695 1674 ntTSL 2 BASIC8.49□□□□□ -1.05
LMO3Q8TAP4 ARMC3-204ENST00000409983 2779 ntAPPRIS ALT2 TSL 2 BASIC8.49□□□□□ -1.05
LMO3Q8TAP4 LPAR1-202ENST00000374430 2993 ntAPPRIS P2 TSL 1 (best) BASIC8.49□□□□□ -1.05
LMO3Q8TAP4 VTI1A-202ENST00000432306 1738 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
LMO3Q8TAP4 PJA2-201ENST00000361189 4889 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
LMO3Q8TAP4 SLC22A9-201ENST00000279178 2343 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
LMO3Q8TAP4 DHFR2-202ENST00000394221 4038 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
LMO3Q8TAP4 PICALM-201ENST00000356360 1958 ntTSL 5 BASIC8.48□□□□□ -1.05
LMO3Q8TAP4 NDUFS1-204ENST00000440274 2394 ntTSL 2 BASIC8.48□□□□□ -1.05
LMO3Q8TAP4 IFT43-201ENST00000238628 816 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
LMO3Q8TAP4 HIKESHI-201ENST00000278483 1113 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
LMO3Q8TAP4 RNU4-59P-201ENST00000364447 116 ntBASIC8.48□□□□□ -1.05
LMO3Q8TAP4 IGLV3-32-201ENST00000390303 383 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
LMO3Q8TAP4 AL358779.1-201ENST00000415465 400 ntTSL 2 BASIC8.48□□□□□ -1.05
LMO3Q8TAP4 ENTPD3-AS1-201ENST00000420850 791 ntTSL 2 BASIC8.48□□□□□ -1.05
LMO3Q8TAP4 SPCS1-202ENST00000423431 822 ntTSL 3 BASIC8.48□□□□□ -1.05
LMO3Q8TAP4 DBIL5P-202ENST00000453414 250 ntBASIC8.48□□□□□ -1.05
LMO3Q8TAP4 AL391361.2-202ENST00000454826 439 ntTSL 5 BASIC8.48□□□□□ -1.05
LMO3Q8TAP4 AC080129.1-201ENST00000457815 406 ntTSL 3 BASIC8.48□□□□□ -1.05
LMO3Q8TAP4 RPS20P23-201ENST00000461683 354 ntBASIC8.48□□□□□ -1.05
LMO3Q8TAP4 AC027607.1-201ENST00000503034 534 ntTSL 3 BASIC8.48□□□□□ -1.05
LMO3Q8TAP4 AC110741.1-201ENST00000520149 582 ntTSL 3 BASIC8.48□□□□□ -1.05
LMO3Q8TAP4 IGLVI-70-201ENST00000523272 390 ntBASIC8.48□□□□□ -1.05
LMO3Q8TAP4 LINC02325-203ENST00000554862 733 ntTSL 4 BASIC8.48□□□□□ -1.05
LMO3Q8TAP4 AC005230.1-201ENST00000555418 285 ntBASIC8.48□□□□□ -1.05
LMO3Q8TAP4 LINC01515-207ENST00000598092 496 ntTSL 3 BASIC8.48□□□□□ -1.05
LMO3Q8TAP4 LINC01515-209ENST00000599409 755 ntTSL 5 BASIC8.48□□□□□ -1.05
LMO3Q8TAP4 OR13Z2P-201ENST00000606338 555 ntBASIC8.48□□□□□ -1.05
LMO3Q8TAP4 MIR6751-201ENST00000610479 63 ntBASIC8.48□□□□□ -1.05
LMO3Q8TAP4 SMIM11B-201ENST00000612624 1021 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
LMO3Q8TAP4 AC099654.4-201ENST00000614168 1059 ntBASIC8.48□□□□□ -1.05
LMO3Q8TAP4 SLC20A1P2-201ENST00000618036 966 ntBASIC8.48□□□□□ -1.05
LMO3Q8TAP4 AC119674.1-221ENST00000641594 1213 ntBASIC8.48□□□□□ -1.05
LMO3Q8TAP4 ATP9B-208ENST00000586722 1650 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
LMO3Q8TAP4 NOTCH2-207ENST00000602566 5046 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
LMO3Q8TAP4 GOLGA8B-202ENST00000438958 4252 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
LMO3Q8TAP4 ZBTB40-201ENST00000374651 8368 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
LMO3Q8TAP4 CORIN-207ENST00000505909 3018 ntTSL 5 BASIC8.48□□□□□ -1.05
LMO3Q8TAP4 TGIF1-223ENST00000618001 3030 ntTSL 2 BASIC8.48□□□□□ -1.05
LMO3Q8TAP4 SAR1A-205ENST00000373242 5981 ntAPPRIS P1 TSL 2 BASIC8.48□□□□□ -1.05
LMO3Q8TAP4 ATP2B1-204ENST00000428670 7032 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
LMO3Q8TAP4 ZC3H14-203ENST00000318308 1384 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
LMO3Q8TAP4 CDK15-203ENST00000434439 2240 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
LMO3Q8TAP4 PDXDC1-203ENST00000450288 4171 ntTSL 5 BASIC8.47□□□□□ -1.05
LMO3Q8TAP4 OPALIN-206ENST00000611913 3115 ntTSL 5 BASIC8.47□□□□□ -1.05
LMO3Q8TAP4 ENAH-204ENST00000366844 13168 ntAPPRIS P4 TSL 1 (best) BASIC8.47□□□□□ -1.05
LMO3Q8TAP4 NOS1-202ENST00000338101 4462 ntTSL 5 BASIC8.47□□□□□ -1.05
LMO3Q8TAP4 ABCB4-202ENST00000358400 3826 ntTSL 5 BASIC8.47□□□□□ -1.05
LMO3Q8TAP4 POLR1B-204ENST00000417433 3836 ntTSL 2 BASIC8.47□□□□□ -1.05
LMO3Q8TAP4 FER-209ENST00000618353 1420 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
LMO3Q8TAP4 EYA1-202ENST00000340726 4326 ntAPPRIS P3 TSL 1 (best) BASIC8.47□□□□□ -1.05
LMO3Q8TAP4 HSPD1P10-201ENST00000404829 1676 ntBASIC8.47□□□□□ -1.05
LMO3Q8TAP4 AC138627.1-203ENST00000641872 1680 ntBASIC8.47□□□□□ -1.05
LMO3Q8TAP4 CD109-202ENST00000422508 9221 ntAPPRIS ALT1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 131.7 ms