RNA–Protein interactions for RNA: ENST00000399556.2

NPM1P46-201, Transcript of nucleophosmin 1 pseudogene 46, humanhuman

BASIC

Gene NPM1P46, Length 865 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1P46-201ENST00000399556 AEBP2Q6ZN18 517 aaPredicted RBP24.59■■□□□ 1.53
NPM1P46-201ENST00000399556 CHIC1Q5VXU3 224 aa22.96■■□□□ 1.27
NPM1P46-201ENST00000399556 SENP3Q9H4L4 574 aaPredicted RBP21.05■□□□□ 0.96
NPM1P46-201ENST00000399556 PHF23Q9BUL5 403 aaPredicted RBP20.71■□□□□ 0.91
NPM1P46-201ENST00000399556 NISCHQ9Y2I1 1504 aa20.25■□□□□ 0.83
NPM1P46-201ENST00000399556 FOXD1Q16676 465 aa19.68■□□□□ 0.74
NPM1P46-201ENST00000399556 POTEDQ86YR6 584 aa19.05■□□□□ 0.64
NPM1P46-201ENST00000399556 MSH5O43196 834 aa18.61■□□□□ 0.57
NPM1P46-201ENST00000399556 PIAS4Q8N2W9 510 aaPredicted RBP18.29■□□□□ 0.52
NPM1P46-201ENST00000399556 CCDC180Q9P1Z9 1646 aa18.21■□□□□ 0.51
NPM1P46-201ENST00000399556 ABCC9O60706 1549 aa18.14■□□□□ 0.49
NPM1P46-201ENST00000399556 PLPPR3Q6T4P5 718 aa18.03■□□□□ 0.48
NPM1P46-201ENST00000399556 PPP6R1Q9UPN7 881 aa18.02■□□□□ 0.48
NPM1P46-201ENST00000399556 ADRA2BP18089 450 aa17.94■□□□□ 0.46
NPM1P46-201ENST00000399556 RB1CC1Q8TDY2 1594 aa17.35■□□□□ 0.37
NPM1P46-201ENST00000399556 DCAF8L2P0C7V8 631 aa17.24■□□□□ 0.35
NPM1P46-201ENST00000399556 NACADO15069 1562 aa17.22■□□□□ 0.35
NPM1P46-201ENST00000399556 MYO15BQ96JP2 1530 aa16.96■□□□□ 0.31
NPM1P46-201ENST00000399556 DNAJC5BQ9UF47 199 aa16.92■□□□□ 0.3
NPM1P46-201ENST00000399556 UNC13AQ9UPW8 1703 aa16.92■□□□□ 0.3
NPM1P46-201ENST00000399556 PABPN1Q86U42 306 aaKnown RBP eCLIP16.91■□□□□ 0.3
NPM1P46-201ENST00000399556 ZCCHC6Q5VYS8 1495 aaKnown RBP16.75■□□□□ 0.27
NPM1P46-201ENST00000399556 DCAF1Q9Y4B6 1507 aa16.75■□□□□ 0.27
NPM1P46-201ENST00000399556 BICRAQ9NZM4 1560 aa16.71■□□□□ 0.27
NPM1P46-201ENST00000399556 MAPK8IP2Q13387 824 aaPredicted RBP16.64■□□□□ 0.25
NPM1P46-201ENST00000399556 DMRT2Q9Y5R5 561 aa16.6■□□□□ 0.25
NPM1P46-201ENST00000399556 SHROOM4Q9ULL8 1493 aa16.6■□□□□ 0.25
NPM1P46-201ENST00000399556 SCRIBQ14160 1630 aa16.56■□□□□ 0.24
NPM1P46-201ENST00000399556 CC2D2AQ9P2K1 1620 aa16.4■□□□□ 0.22
NPM1P46-201ENST00000399556 SCAF1Q9H7N4 1312 aaKnown RBP16.4■□□□□ 0.22
NPM1P46-201ENST00000399556 EIF4G1Q04637 1599 aaKnown RBP16.36■□□□□ 0.21
NPM1P46-201ENST00000399556 CECR2Q9BXF3 1484 aa16.35■□□□□ 0.21
NPM1P46-201ENST00000399556 CACNB1Q02641 598 aaPredicted RBP16.31■□□□□ 0.2
NPM1P46-201ENST00000399556 DCAF8L1A6NGE4 600 aa16.02■□□□□ 0.16
NPM1P46-201ENST00000399556 NCAPD3P42695 1498 aa15.85■□□□□ 0.13
NPM1P46-201ENST00000399556 RNF39Q9H2S5 420 aa15.83■□□□□ 0.12
NPM1P46-201ENST00000399556 SMARCA2P51531 1590 aa15.82■□□□□ 0.12
NPM1P46-201ENST00000399556 SMARCA4P51532 1647 aa15.79■□□□□ 0.12
NPM1P46-201ENST00000399556 ATAD2BQ9ULI0 1458 aa15.79■□□□□ 0.12
NPM1P46-201ENST00000399556 HOXD11P31277 338 aaPredicted RBP15.78■□□□□ 0.12
NPM1P46-201ENST00000399556 BAZ1AQ9NRL2 1556 aaPredicted RBP15.77■□□□□ 0.11
NPM1P46-201ENST00000399556 HMGXB3Q12766 1538 aa15.74■□□□□ 0.11
NPM1P46-201ENST00000399556 ERCC6Q03468 1493 aa15.74■□□□□ 0.11
NPM1P46-201ENST00000399556 PPP4R3CPQ6ZMV5 832 aa15.74■□□□□ 0.11
NPM1P46-201ENST00000399556 BAZ1BQ9UIG0 1483 aaKnown RBP15.7■□□□□ 0.1
NPM1P46-201ENST00000399556 CUX2O14529 1486 aa15.66■□□□□ 0.1
NPM1P46-201ENST00000399556 PEG3Q9GZU2 1588 aa15.63■□□□□ 0.09
NPM1P46-201ENST00000399556 DNAJC5Q9H3Z4 198 aa15.63■□□□□ 0.09
NPM1P46-201ENST00000399556 MROH2BQ7Z745 1585 aa15.58■□□□□ 0.08
NPM1P46-201ENST00000399556 C1QBPQ07021 282 aaKnown RBP15.57■□□□□ 0.08
NPM1P46-201ENST00000399556 NESP48681 1621 aa15.55■□□□□ 0.08
NPM1P46-201ENST00000399556 CNKSR2Q8WXI2 1034 aa15.55■□□□□ 0.08
NPM1P46-201ENST00000399556 LAMC3Q9Y6N6 1575 aa15.53■□□□□ 0.08
NPM1P46-201ENST00000399556 RNF216Q9NWF9 866 aaPredicted RBP15.53■□□□□ 0.08
NPM1P46-201ENST00000399556 PDS5BQ9NTI5 1447 aa15.47■□□□□ 0.07
NPM1P46-201ENST00000399556 WIZO95785 1651 aa15.42■□□□□ 0.06
NPM1P46-201ENST00000399556 KIF21AQ7Z4S6 1674 aa15.41■□□□□ 0.06
NPM1P46-201ENST00000399556 CADPSQ9ULU8 1353 aa15.4■□□□□ 0.06
NPM1P46-201ENST00000399556 THOC2Q8NI27 1593 aaKnown RBP15.39■□□□□ 0.05
NPM1P46-201ENST00000399556 MRC2Q9UBG0 1479 aa15.28■□□□□ 0.04
NPM1P46-201ENST00000399556 RSF1Q96T23 1441 aaPredicted RBP15.27■□□□□ 0.04
NPM1P46-201ENST00000399556 CEP164Q9UPV0 1460 aa15.25■□□□□ 0.03
NPM1P46-201ENST00000399556 TOP2AP11388 1531 aaKnown RBP15.23■□□□□ 0.03
NPM1P46-201ENST00000399556 FANCD2Q9BXW9 1451 aa15.21■□□□□ 0.03
NPM1P46-201ENST00000399556 WDR62O43379 1518 aa15.21■□□□□ 0.03
NPM1P46-201ENST00000399556 CFTRP13569 1480 aa15.2■□□□□ 0.02
NPM1P46-201ENST00000399556 PRDM2Q13029 1718 aa15.14■□□□□ 0.01
NPM1P46-201ENST00000399556 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.08■□□□□ 0
NPM1P46-201ENST00000399556 CCDC88BA6NC98 1476 aa15.06■□□□□ 0
NPM1P46-201ENST00000399556 URB2Q14146 1524 aaKnown RBP15.03■□□□□ -0
NPM1P46-201ENST00000399556 OSCARQ8IYS5 282 aa15.03■□□□□ -0
NPM1P46-201ENST00000399556 ABCC8Q09428 1581 aa14.99□□□□□ -0.01
NPM1P46-201ENST00000399556 TRIM41Q8WV44 630 aa14.99□□□□□ -0.01
NPM1P46-201ENST00000399556 NCBP3Q53F19 620 aaKnown RBP14.97□□□□□ -0.01
NPM1P46-201ENST00000399556 IFT140Q96RY7 1462 aa14.95□□□□□ -0.02
NPM1P46-201ENST00000399556 TOPBP1Q92547 1522 aa14.92□□□□□ -0.02
NPM1P46-201ENST00000399556 DNMBPQ6XZF7 1577 aa14.88□□□□□ -0.03
NPM1P46-201ENST00000399556 ZNF608Q9ULD9 1512 aaPredicted RBP14.84□□□□□ -0.03
NPM1P46-201ENST00000399556 POTEHQ6S545 545 aa14.83□□□□□ -0.04
NPM1P46-201ENST00000399556 EIF4G3O43432 1585 aaKnown RBP14.8□□□□□ -0.04
NPM1P46-201ENST00000399556 NPM3O75607 178 aaKnown RBP14.77□□□□□ -0.05
NPM1P46-201ENST00000399556 FBLN2P98095 1184 aa14.77□□□□□ -0.05
NPM1P46-201ENST00000399556 TARBP1Q13395 1621 aaKnown RBP14.76□□□□□ -0.05
NPM1P46-201ENST00000399556 AQRO60306 1485 aaKnown RBP eCLIP14.75□□□□□ -0.05
NPM1P46-201ENST00000399556 SOGA1O94964 1423 aa14.75□□□□□ -0.05
NPM1P46-201ENST00000399556 POLA1P09884 1462 aaPredicted RBP14.74□□□□□ -0.05
NPM1P46-201ENST00000399556 SUPT5HO00267 1087 aaKnown RBP14.73□□□□□ -0.05
NPM1P46-201ENST00000399556 RIMBP3CA6NJZ7 1639 aa14.73□□□□□ -0.05
NPM1P46-201ENST00000399556 RIMBP3BA6NNM3 1639 aa14.73□□□□□ -0.05
NPM1P46-201ENST00000399556 RIMBP3Q9UFD9 1639 aa14.73□□□□□ -0.05
NPM1P46-201ENST00000399556 CHD1O14646 1710 aa14.72□□□□□ -0.05
NPM1P46-201ENST00000399556 U3KPZ7 1027 aaPredicted RBP14.69□□□□□ -0.06
NPM1P46-201ENST00000399556 WDR97A6NE52 1622 aa14.69□□□□□ -0.06
NPM1P46-201ENST00000399556 TDRD9Q8NDG6 1382 aaKnown RBP14.69□□□□□ -0.06
NPM1P46-201ENST00000399556 RAD54L2Q9Y4B4 1467 aa14.69□□□□□ -0.06
NPM1P46-201ENST00000399556 ARHGEF11O15085 1522 aa14.67□□□□□ -0.06
NPM1P46-201ENST00000399556 FGD5Q6ZNL6 1462 aa14.67□□□□□ -0.06
NPM1P46-201ENST00000399556 DSG3P32926 999 aa14.66□□□□□ -0.06
NPM1P46-201ENST00000399556 CHMP7Q8WUX9 453 aaPredicted RBP14.66□□□□□ -0.06
NPM1P46-201ENST00000399556 CAPN15O75808 1086 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms