RNA–Protein interactions for RNA: ENST00000555818.5

SIPA1L1-211, Transcript of signal induced proliferation associated 1 like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIPA1L1, Length 7,831 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1L1-211ENST00000555818 NISCHQ9Y2I1 1504 aa16.47■□□□□ 0.23
SIPA1L1-211ENST00000555818 DCAF8L2P0C7V8 631 aa14.46□□□□□ -0.1
SIPA1L1-211ENST00000555818 CCDC180Q9P1Z9 1646 aa14.23□□□□□ -0.13
SIPA1L1-211ENST00000555818 SHROOM4Q9ULL8 1493 aa13.96□□□□□ -0.17
SIPA1L1-211ENST00000555818 SUPT5HO00267 1087 aaKnown RBP13.83□□□□□ -0.19
SIPA1L1-211ENST00000555818 ZCCHC6Q5VYS8 1495 aaKnown RBP13.79□□□□□ -0.2
SIPA1L1-211ENST00000555818 DCAF1Q9Y4B6 1507 aa13.6□□□□□ -0.23
SIPA1L1-211ENST00000555818 ABCC9O60706 1549 aa13.52□□□□□ -0.24
SIPA1L1-211ENST00000555818 NACADO15069 1562 aa13.41□□□□□ -0.26
SIPA1L1-211ENST00000555818 MYO15BQ96JP2 1530 aa13.38□□□□□ -0.27
SIPA1L1-211ENST00000555818 RB1CC1Q8TDY2 1594 aa13.32□□□□□ -0.28
SIPA1L1-211ENST00000555818 SCRIBQ14160 1630 aa13.21□□□□□ -0.3
SIPA1L1-211ENST00000555818 TRIM41Q8WV44 630 aa13.1□□□□□ -0.31
SIPA1L1-211ENST00000555818 PELP1Q8IZL8 1130 aaKnown RBP13.06□□□□□ -0.32
SIPA1L1-211ENST00000555818 CHIC1Q5VXU3 224 aa13□□□□□ -0.33
SIPA1L1-211ENST00000555818 PABPN1Q86U42 306 aaKnown RBP eCLIP12.9□□□□□ -0.34
SIPA1L1-211ENST00000555818 BAZ1AQ9NRL2 1556 aaPredicted RBP12.9□□□□□ -0.34
SIPA1L1-211ENST00000555818 RSF1Q96T23 1441 aaPredicted RBP12.87□□□□□ -0.35
SIPA1L1-211ENST00000555818 FAM9AQ8IZU1 332 aaPredicted RBP12.81□□□□□ -0.36
SIPA1L1-211ENST00000555818 APLP2Q06481 763 aa12.8□□□□□ -0.36
SIPA1L1-211ENST00000555818 UBTFP17480 764 aaKnown RBP12.67□□□□□ -0.38
SIPA1L1-211ENST00000555818 CECR2Q9BXF3 1484 aa12.64□□□□□ -0.39
SIPA1L1-211ENST00000555818 SMARCA2P51531 1590 aa12.64□□□□□ -0.39
SIPA1L1-211ENST00000555818 EHMT2Q96KQ7 1210 aa12.62□□□□□ -0.39
SIPA1L1-211ENST00000555818 BAZ1BQ9UIG0 1483 aaKnown RBP12.62□□□□□ -0.39
SIPA1L1-211ENST00000555818 MROH2BQ7Z745 1585 aa12.61□□□□□ -0.39
SIPA1L1-211ENST00000555818 ZEB1P37275 1124 aaPredicted RBP12.59□□□□□ -0.39
SIPA1L1-211ENST00000555818 SMARCA4P51532 1647 aa12.57□□□□□ -0.4
SIPA1L1-211ENST00000555818 TOP2AP11388 1531 aaKnown RBP12.57□□□□□ -0.4
SIPA1L1-211ENST00000555818 EEA1Q15075 1411 aa12.57□□□□□ -0.4
SIPA1L1-211ENST00000555818 TRIM26Q12899 539 aaPredicted RBP12.53□□□□□ -0.4
SIPA1L1-211ENST00000555818 PCGF6Q9BYE7 350 aa12.53□□□□□ -0.4
SIPA1L1-211ENST00000555818 LOC105371045A0A1W2PR82 267 aa12.49□□□□□ -0.41
SIPA1L1-211ENST00000555818 MYT1Q01538 1121 aa12.48□□□□□ -0.41
SIPA1L1-211ENST00000555818 WIZO95785 1651 aa12.47□□□□□ -0.41
SIPA1L1-211ENST00000555818 CSRNP3Q8WYN3 585 aa12.46□□□□□ -0.41
SIPA1L1-211ENST00000555818 CCER1Q8TC90 406 aaPredicted RBP12.42□□□□□ -0.42
SIPA1L1-211ENST00000555818 WRNQ14191 1432 aaPredicted RBP eCLIP12.41□□□□□ -0.42
SIPA1L1-211ENST00000555818 CCDC88BA6NC98 1476 aa12.41□□□□□ -0.42
SIPA1L1-211ENST00000555818 ATAD2BQ9ULI0 1458 aa12.4□□□□□ -0.42
SIPA1L1-211ENST00000555818 ERICH6Q7L0X2 663 aa12.39□□□□□ -0.43
SIPA1L1-211ENST00000555818 UNC13AQ9UPW8 1703 aa12.3□□□□□ -0.44
SIPA1L1-211ENST00000555818 RANGAP1P46060 587 aaPredicted RBP12.3□□□□□ -0.44
SIPA1L1-211ENST00000555818 BICRAQ9NZM4 1560 aa12.3□□□□□ -0.44
SIPA1L1-211ENST00000555818 NCAPD3P42695 1498 aa12.29□□□□□ -0.44
SIPA1L1-211ENST00000555818 GOLGA3Q08378 1498 aa12.29□□□□□ -0.44
SIPA1L1-211ENST00000555818 CEP164Q9UPV0 1460 aa12.27□□□□□ -0.45
SIPA1L1-211ENST00000555818 HMGXB3Q12766 1538 aa12.26□□□□□ -0.45
SIPA1L1-211ENST00000555818 PEG3Q9GZU2 1588 aa12.26□□□□□ -0.45
SIPA1L1-211ENST00000555818 EIF4G1Q04637 1599 aaKnown RBP12.26□□□□□ -0.45
SIPA1L1-211ENST00000555818 KIF27Q86VH2 1401 aa12.25□□□□□ -0.45
SIPA1L1-211ENST00000555818 HRCP23327 699 aa12.23□□□□□ -0.45
SIPA1L1-211ENST00000555818 ATP1B4Q9UN42 357 aaPredicted RBP12.23□□□□□ -0.45
SIPA1L1-211ENST00000555818 TNIKQ9UKE5 1360 aa12.22□□□□□ -0.45
SIPA1L1-211ENST00000555818 TTBK1Q5TCY1 1321 aaPredicted RBP12.2□□□□□ -0.46
SIPA1L1-211ENST00000555818 CADPSQ9ULU8 1353 aa12.18□□□□□ -0.46
SIPA1L1-211ENST00000555818 PDS5BQ9NTI5 1447 aa12.16□□□□□ -0.46
SIPA1L1-211ENST00000555818 ABCC8Q09428 1581 aa12.15□□□□□ -0.46
SIPA1L1-211ENST00000555818 CLIP1P30622 1438 aa12.14□□□□□ -0.47
SIPA1L1-211ENST00000555818 CEP162Q5TB80 1403 aa12.13□□□□□ -0.47
SIPA1L1-211ENST00000555818 YTHDC1Q96MU7 727 aaKnown RBP12.11□□□□□ -0.47
SIPA1L1-211ENST00000555818 PPARGC1BQ86YN6 1023 aaKnown RBP12.07□□□□□ -0.48
SIPA1L1-211ENST00000555818 CFTRP13569 1480 aa12.05□□□□□ -0.48
SIPA1L1-211ENST00000555818 SOGA1O94964 1423 aa12.05□□□□□ -0.48
SIPA1L1-211ENST00000555818 CUX2O14529 1486 aa12.03□□□□□ -0.48
SIPA1L1-211ENST00000555818 CC2D2AQ9P2K1 1620 aa12□□□□□ -0.49
SIPA1L1-211ENST00000555818 FANCD2Q9BXW9 1451 aa12□□□□□ -0.49
SIPA1L1-211ENST00000555818 CDK11AQ9UQ88 783 aaPredicted RBP11.99□□□□□ -0.49
SIPA1L1-211ENST00000555818 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.98□□□□□ -0.49
SIPA1L1-211ENST00000555818 HNRNPUL2Q1KMD3 747 aaKnown RBP11.98□□□□□ -0.49
SIPA1L1-211ENST00000555818 CARMIL1Q5VZK9 1371 aa11.98□□□□□ -0.49
SIPA1L1-211ENST00000555818 FHAD1B1AJZ9 1412 aa11.98□□□□□ -0.49
SIPA1L1-211ENST00000555818 MYT1LQ9UL68 1186 aa11.97□□□□□ -0.49
SIPA1L1-211ENST00000555818 ERCC6Q03468 1493 aa11.97□□□□□ -0.49
SIPA1L1-211ENST00000555818 CENPBP07199 599 aaPredicted RBP11.97□□□□□ -0.49
SIPA1L1-211ENST00000555818 TOP2BQ02880 1626 aa11.97□□□□□ -0.49
SIPA1L1-211ENST00000555818 ACIN1Q9UKV3 1341 aaKnown RBP11.95□□□□□ -0.5
SIPA1L1-211ENST00000555818 VPS8Q8N3P4 1428 aa11.94□□□□□ -0.5
SIPA1L1-211ENST00000555818 KIF21BO75037 1637 aa11.94□□□□□ -0.5
SIPA1L1-211ENST00000555818 NEFLP07196 543 aa11.93□□□□□ -0.5
SIPA1L1-211ENST00000555818 ERICH3Q5RHP9 1530 aa11.92□□□□□ -0.5
SIPA1L1-211ENST00000555818 RAPGEF2Q9Y4G8 1499 aa11.92□□□□□ -0.5
SIPA1L1-211ENST00000555818 LAMC3Q9Y6N6 1575 aa11.9□□□□□ -0.5
SIPA1L1-211ENST00000555818 FAM50AQ14320 339 aaKnown RBP11.89□□□□□ -0.51
SIPA1L1-211ENST00000555818 DAXXQ9UER7 740 aaPredicted RBP11.89□□□□□ -0.51
SIPA1L1-211ENST00000555818 SYNJ1O43426 1573 aa11.89□□□□□ -0.51
SIPA1L1-211ENST00000555818 FBLN2P98095 1184 aa11.88□□□□□ -0.51
SIPA1L1-211ENST00000555818 ITGAEP38570 1179 aa11.88□□□□□ -0.51
SIPA1L1-211ENST00000555818 CHMP7Q8WUX9 453 aaPredicted RBP11.87□□□□□ -0.51
SIPA1L1-211ENST00000555818 FGD5Q6ZNL6 1462 aa11.87□□□□□ -0.51
SIPA1L1-211ENST00000555818 MTUS2Q5JR59 1369 aa11.84□□□□□ -0.51
SIPA1L1-211ENST00000555818 P3H3Q8IVL6 736 aa11.84□□□□□ -0.51
SIPA1L1-211ENST00000555818 BIVM-ERCC5R4GMW8 1640 aa11.84□□□□□ -0.51
SIPA1L1-211ENST00000555818 DNMBPQ6XZF7 1577 aa11.84□□□□□ -0.51
SIPA1L1-211ENST00000555818 FMN1Q68DA7 1419 aa11.83□□□□□ -0.52
SIPA1L1-211ENST00000555818 CUX1P39880 1505 aa11.8□□□□□ -0.52
SIPA1L1-211ENST00000555818 RUSC2Q8N2Y8 1516 aa11.79□□□□□ -0.52
SIPA1L1-211ENST00000555818 CLSPNQ9HAW4 1339 aa11.78□□□□□ -0.52
SIPA1L1-211ENST00000555818 PRDM2Q13029 1718 aa11.77□□□□□ -0.52
SIPA1L1-211ENST00000555818 IGF1RP08069 1367 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms