RNA–Protein interactions for RNA: ENST00000415932.1

CASC20-201, Transcript of cancer susceptibility 20, humanhuman

TSL 5 BASIC

Gene CASC20, Length 1,484 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC20-201ENST00000415932 AEBP2Q6ZN18 517 aaPredicted RBP30.27■■■□□ 2.44
CASC20-201ENST00000415932 CHIC1Q5VXU3 224 aa29.38■■■□□ 2.29
CASC20-201ENST00000415932 PHF23Q9BUL5 403 aaPredicted RBP25.83■■□□□ 1.73
CASC20-201ENST00000415932 SENP3Q9H4L4 574 aaPredicted RBP25.72■■□□□ 1.71
CASC20-201ENST00000415932 FOXD1Q16676 465 aa23.89■■□□□ 1.42
CASC20-201ENST00000415932 PLPPR3Q6T4P5 718 aa23.79■■□□□ 1.4
CASC20-201ENST00000415932 PPP6R1Q9UPN7 881 aa22.85■■□□□ 1.25
CASC20-201ENST00000415932 ADRA2BP18089 450 aa22.83■■□□□ 1.25
CASC20-201ENST00000415932 PIAS4Q8N2W9 510 aaPredicted RBP22.49■■□□□ 1.19
CASC20-201ENST00000415932 MSH5O43196 834 aa22.11■■□□□ 1.13
CASC20-201ENST00000415932 PPP4R3CPQ6ZMV5 832 aa20.94■□□□□ 0.94
CASC20-201ENST00000415932 SCAF1Q9H7N4 1312 aaKnown RBP20.89■□□□□ 0.94
CASC20-201ENST00000415932 MAPK8IP2Q13387 824 aaPredicted RBP20.78■□□□□ 0.92
CASC20-201ENST00000415932 POTEDQ86YR6 584 aa20.67■□□□□ 0.9
CASC20-201ENST00000415932 DMRT2Q9Y5R5 561 aa20.5■□□□□ 0.87
CASC20-201ENST00000415932 CNKSR2Q8WXI2 1034 aa20.39■□□□□ 0.85
CASC20-201ENST00000415932 NCBP3Q53F19 620 aaKnown RBP20.34■□□□□ 0.85
CASC20-201ENST00000415932 KCNA4P22459 653 aa20.24■□□□□ 0.83
CASC20-201ENST00000415932 NPM3O75607 178 aaKnown RBP20.04■□□□□ 0.8
CASC20-201ENST00000415932 RNF216Q9NWF9 866 aaPredicted RBP20.04■□□□□ 0.8
CASC20-201ENST00000415932 HOXD11P31277 338 aaPredicted RBP19.99■□□□□ 0.79
CASC20-201ENST00000415932 DCAF8L1A6NGE4 600 aa19.66■□□□□ 0.74
CASC20-201ENST00000415932 DNAJC5BQ9UF47 199 aa19.45■□□□□ 0.7
CASC20-201ENST00000415932 SLC4A1APQ9BWU0 796 aaKnown RBP19.24■□□□□ 0.67
CASC20-201ENST00000415932 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.09■□□□□ 0.65
CASC20-201ENST00000415932 NISCHQ9Y2I1 1504 aa19.08■□□□□ 0.64
CASC20-201ENST00000415932 SLC4A2P04920 1241 aa18.97■□□□□ 0.63
CASC20-201ENST00000415932 RNF39Q9H2S5 420 aa18.91■□□□□ 0.62
CASC20-201ENST00000415932 U3KPZ7 1027 aaPredicted RBP18.74■□□□□ 0.59
CASC20-201ENST00000415932 C1QBPQ07021 282 aaKnown RBP18.69■□□□□ 0.58
CASC20-201ENST00000415932 FOXD4L1Q9NU39 408 aa18.67■□□□□ 0.58
CASC20-201ENST00000415932 ZBTB22O15209 634 aa18.61■□□□□ 0.57
CASC20-201ENST00000415932 CACNB1Q02641 598 aaPredicted RBP18.58■□□□□ 0.57
CASC20-201ENST00000415932 MYCNP04198 464 aaPredicted RBP18.52■□□□□ 0.55
CASC20-201ENST00000415932 EHMT2Q96KQ7 1210 aa18.5■□□□□ 0.55
CASC20-201ENST00000415932 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.45■□□□□ 0.54
CASC20-201ENST00000415932 HNRNPUL2Q1KMD3 747 aaKnown RBP18.45■□□□□ 0.54
CASC20-201ENST00000415932 SAMD1Q6SPF0 538 aaPredicted RBP18.37■□□□□ 0.53
CASC20-201ENST00000415932 CSRNP3Q8WYN3 585 aa18.37■□□□□ 0.53
CASC20-201ENST00000415932 APLP2Q06481 763 aa18.28■□□□□ 0.52
CASC20-201ENST00000415932 SPINK5Q9NQ38 1064 aaPredicted RBP18.27■□□□□ 0.52
CASC20-201ENST00000415932 CAPN15O75808 1086 aa18.22■□□□□ 0.51
CASC20-201ENST00000415932 TRHP20396 242 aaPredicted RBP18.1■□□□□ 0.49
CASC20-201ENST00000415932 ZNF219Q9P2Y4 722 aaPredicted RBP18.07■□□□□ 0.48
CASC20-201ENST00000415932 ATXN8OSP0DMR3 200 aa18.04■□□□□ 0.48
CASC20-201ENST00000415932 ATF5Q9Y2D1 282 aaPredicted RBP18.04■□□□□ 0.48
CASC20-201ENST00000415932 DSG3P32926 999 aa17.95■□□□□ 0.46
CASC20-201ENST00000415932 ABCB7O75027 752 aa17.86■□□□□ 0.45
CASC20-201ENST00000415932 POLA2Q14181 598 aa17.76■□□□□ 0.43
CASC20-201ENST00000415932 ZBTB12Q9Y330 459 aaPredicted RBP17.43■□□□□ 0.38
CASC20-201ENST00000415932 FBLN2P98095 1184 aa17.3■□□□□ 0.36
CASC20-201ENST00000415932 MKRN4PQ13434 485 aaPredicted RBP17.24■□□□□ 0.35
CASC20-201ENST00000415932 OSCARQ8IYS5 282 aa17.14■□□□□ 0.33
CASC20-201ENST00000415932 RBM42Q9BTD8 480 aaKnown RBP17.1■□□□□ 0.33
CASC20-201ENST00000415932 SPDYE2BA6NHP3 402 aa16.95■□□□□ 0.3
CASC20-201ENST00000415932 SPDYE6P0CI01 402 aa16.95■□□□□ 0.3
CASC20-201ENST00000415932 SPDYE2Q495Y8 402 aa16.95■□□□□ 0.3
CASC20-201ENST00000415932 CCDC180Q9P1Z9 1646 aa16.88■□□□□ 0.29
CASC20-201ENST00000415932 ZNF692Q9BU19 519 aaPredicted RBP16.87■□□□□ 0.29
CASC20-201ENST00000415932 AKT1S1Q96B36 256 aa16.86■□□□□ 0.29
CASC20-201ENST00000415932 SSUH2Q9Y2M2 353 aa16.79■□□□□ 0.28
CASC20-201ENST00000415932 SPDYE4A6NLX3 237 aa16.78■□□□□ 0.28
CASC20-201ENST00000415932 REM2Q8IYK8 340 aaPredicted RBP16.7■□□□□ 0.26
CASC20-201ENST00000415932 PABPN1Q86U42 306 aaKnown RBP eCLIP16.64■□□□□ 0.25
CASC20-201ENST00000415932 FKBP8Q14318 412 aa16.62■□□□□ 0.25
CASC20-201ENST00000415932 PITPNM1O00562 1244 aa16.5■□□□□ 0.23
CASC20-201ENST00000415932 SPDYE1Q8NFV5 336 aaPredicted RBP16.5■□□□□ 0.23
CASC20-201ENST00000415932 ABCC9O60706 1549 aa16.48■□□□□ 0.23
CASC20-201ENST00000415932 CHRDL2Q6WN34 429 aa16.47■□□□□ 0.23
CASC20-201ENST00000415932 CLEC11AQ9Y240 323 aa16.46■□□□□ 0.23
CASC20-201ENST00000415932 PROM2Q8N271 834 aa16.44■□□□□ 0.22
CASC20-201ENST00000415932 STAG3Q9UJ98 1225 aa16.32■□□□□ 0.2
CASC20-201ENST00000415932 PRR29P0C7W0 189 aa16.28■□□□□ 0.2
CASC20-201ENST00000415932 FXR2P51116 673 aaKnown RBP eCLIP16.23■□□□□ 0.19
CASC20-201ENST00000415932 PIP4P2Q8N4L2 257 aa16.22■□□□□ 0.19
CASC20-201ENST00000415932 POTEHQ6S545 545 aa16.16■□□□□ 0.18
CASC20-201ENST00000415932 PRKAR2AP13861 404 aaKnown RBP16.1■□□□□ 0.17
CASC20-201ENST00000415932 FBXO3Q9UK99 471 aa16.09■□□□□ 0.17
CASC20-201ENST00000415932 CHADLQ6NUI6 762 aa16.06■□□□□ 0.16
CASC20-201ENST00000415932 CREBZFQ9NS37 354 aa16.01■□□□□ 0.15
CASC20-201ENST00000415932 DCAF8L2P0C7V8 631 aa15.95■□□□□ 0.14
CASC20-201ENST00000415932 MIER1Q8N108 512 aa15.95■□□□□ 0.14
CASC20-201ENST00000415932 ZCCHC6Q5VYS8 1495 aaKnown RBP15.93■□□□□ 0.14
CASC20-201ENST00000415932 PLCD3Q8N3E9 789 aa15.91■□□□□ 0.14
CASC20-201ENST00000415932 FARP1Q9Y4F1 1045 aaPredicted RBP15.89■□□□□ 0.13
CASC20-201ENST00000415932 PLEKHG5O94827 1062 aa15.88■□□□□ 0.13
CASC20-201ENST00000415932 VASPP50552 380 aaPredicted RBP15.86■□□□□ 0.13
CASC20-201ENST00000415932 RB1CC1Q8TDY2 1594 aa15.84■□□□□ 0.13
CASC20-201ENST00000415932 NACADO15069 1562 aa15.83■□□□□ 0.12
CASC20-201ENST00000415932 MNX1P50219 401 aaPredicted RBP15.81■□□□□ 0.12
CASC20-201ENST00000415932 HAX1O00165 279 aa15.78■□□□□ 0.12
CASC20-201ENST00000415932 NPM1P06748 294 aaKnown RBP eCLIP15.75■□□□□ 0.11
CASC20-201ENST00000415932 MYO15BQ96JP2 1530 aa15.73■□□□□ 0.11
CASC20-201ENST00000415932 DCAF1Q9Y4B6 1507 aa15.73■□□□□ 0.11
CASC20-201ENST00000415932 ZBTB47Q9UFB7 747 aaPredicted RBP15.72■□□□□ 0.11
CASC20-201ENST00000415932 C19orf67A6NJJ6 358 aa15.69■□□□□ 0.1
CASC20-201ENST00000415932 KLHL34Q8N239 644 aa15.66■□□□□ 0.1
CASC20-201ENST00000415932 IFNLR1Q8IU57 520 aaPredicted RBP15.64■□□□□ 0.09
CASC20-201ENST00000415932 CD44P16070 742 aaKnown RBP15.63■□□□□ 0.09
CASC20-201ENST00000415932 EVX2Q03828 476 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms