RNA–Protein interactions for RNA: ENST00000523022.5

CA1-219, Transcript of carbonic anhydrase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CA1, Length 1,208 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CA1-219ENST00000523022 AEBP2Q6ZN18 517 aaPredicted RBP26■■□□□ 1.75
CA1-219ENST00000523022 CHIC1Q5VXU3 224 aa24.51■■□□□ 1.51
CA1-219ENST00000523022 SENP3Q9H4L4 574 aaPredicted RBP22.23■■□□□ 1.15
CA1-219ENST00000523022 PHF23Q9BUL5 403 aaPredicted RBP21.94■■□□□ 1.1
CA1-219ENST00000523022 FOXD1Q16676 465 aa20.75■□□□□ 0.91
CA1-219ENST00000523022 PLPPR3Q6T4P5 718 aa19.53■□□□□ 0.72
CA1-219ENST00000523022 MSH5O43196 834 aa19.49■□□□□ 0.71
CA1-219ENST00000523022 POTEDQ86YR6 584 aa19.4■□□□□ 0.7
CA1-219ENST00000523022 PIAS4Q8N2W9 510 aaPredicted RBP19.39■□□□□ 0.69
CA1-219ENST00000523022 PPP6R1Q9UPN7 881 aa19.26■□□□□ 0.67
CA1-219ENST00000523022 ADRA2BP18089 450 aa19.23■□□□□ 0.67
CA1-219ENST00000523022 NISCHQ9Y2I1 1504 aa18.67■□□□□ 0.58
CA1-219ENST00000523022 MAPK8IP2Q13387 824 aaPredicted RBP17.73■□□□□ 0.43
CA1-219ENST00000523022 SCAF1Q9H7N4 1312 aaKnown RBP17.59■□□□□ 0.41
CA1-219ENST00000523022 DMRT2Q9Y5R5 561 aa17.58■□□□□ 0.4
CA1-219ENST00000523022 PPP4R3CPQ6ZMV5 832 aa17.11■□□□□ 0.33
CA1-219ENST00000523022 DCAF8L1A6NGE4 600 aa17.04■□□□□ 0.32
CA1-219ENST00000523022 CACNB1Q02641 598 aaPredicted RBP16.92■□□□□ 0.3
CA1-219ENST00000523022 HOXD11P31277 338 aaPredicted RBP16.83■□□□□ 0.28
CA1-219ENST00000523022 CNKSR2Q8WXI2 1034 aa16.81■□□□□ 0.28
CA1-219ENST00000523022 RNF216Q9NWF9 866 aaPredicted RBP16.68■□□□□ 0.26
CA1-219ENST00000523022 RNF39Q9H2S5 420 aa16.59■□□□□ 0.25
CA1-219ENST00000523022 NCBP3Q53F19 620 aaKnown RBP16.41■□□□□ 0.22
CA1-219ENST00000523022 CCDC180Q9P1Z9 1646 aa16.4■□□□□ 0.22
CA1-219ENST00000523022 C1QBPQ07021 282 aaKnown RBP16.35■□□□□ 0.21
CA1-219ENST00000523022 DNAJC5BQ9UF47 199 aa16.22■□□□□ 0.19
CA1-219ENST00000523022 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.17■□□□□ 0.18
CA1-219ENST00000523022 NPM3O75607 178 aaKnown RBP16.14■□□□□ 0.17
CA1-219ENST00000523022 ABCC9O60706 1549 aa16.01■□□□□ 0.15
CA1-219ENST00000523022 U3KPZ7 1027 aaPredicted RBP15.72■□□□□ 0.11
CA1-219ENST00000523022 DCAF8L2P0C7V8 631 aa15.71■□□□□ 0.11
CA1-219ENST00000523022 KCNA4P22459 653 aa15.68■□□□□ 0.1
CA1-219ENST00000523022 CAPN15O75808 1086 aa15.63■□□□□ 0.09
CA1-219ENST00000523022 SPINK5Q9NQ38 1064 aaPredicted RBP15.59■□□□□ 0.09
CA1-219ENST00000523022 ZCCHC6Q5VYS8 1495 aaKnown RBP15.56■□□□□ 0.08
CA1-219ENST00000523022 DSG3P32926 999 aa15.49■□□□□ 0.07
CA1-219ENST00000523022 SLC4A2P04920 1241 aa15.44■□□□□ 0.06
CA1-219ENST00000523022 NACADO15069 1562 aa15.39■□□□□ 0.05
CA1-219ENST00000523022 RB1CC1Q8TDY2 1594 aa15.37■□□□□ 0.05
CA1-219ENST00000523022 DCAF1Q9Y4B6 1507 aa15.36■□□□□ 0.05
CA1-219ENST00000523022 TRHP20396 242 aaPredicted RBP15.34■□□□□ 0.05
CA1-219ENST00000523022 MYO15BQ96JP2 1530 aa15.32■□□□□ 0.04
CA1-219ENST00000523022 APLP2Q06481 763 aa15.3■□□□□ 0.04
CA1-219ENST00000523022 ABCB7O75027 752 aa15.25■□□□□ 0.03
CA1-219ENST00000523022 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.23■□□□□ 0.03
CA1-219ENST00000523022 HNRNPUL2Q1KMD3 747 aaKnown RBP15.23■□□□□ 0.03
CA1-219ENST00000523022 ZNF219Q9P2Y4 722 aaPredicted RBP15.23■□□□□ 0.03
CA1-219ENST00000523022 POTEHQ6S545 545 aa15.15■□□□□ 0.02
CA1-219ENST00000523022 SAMD1Q6SPF0 538 aaPredicted RBP15.13■□□□□ 0.01
CA1-219ENST00000523022 SCRIBQ14160 1630 aa15.1■□□□□ 0.01
CA1-219ENST00000523022 UNC13AQ9UPW8 1703 aa15.1■□□□□ 0.01
CA1-219ENST00000523022 PABPN1Q86U42 306 aaKnown RBP eCLIP15.08■□□□□ 0
CA1-219ENST00000523022 SHROOM4Q9ULL8 1493 aa15.05■□□□□ -0
CA1-219ENST00000523022 BICRAQ9NZM4 1560 aa14.98□□□□□ -0.01
CA1-219ENST00000523022 MYCNP04198 464 aaPredicted RBP14.93□□□□□ -0.02
CA1-219ENST00000523022 POLA2Q14181 598 aa14.85□□□□□ -0.03
CA1-219ENST00000523022 RBM42Q9BTD8 480 aaKnown RBP14.8□□□□□ -0.04
CA1-219ENST00000523022 SLC4A1APQ9BWU0 796 aaKnown RBP14.79□□□□□ -0.04
CA1-219ENST00000523022 FOXD4L1Q9NU39 408 aa14.67□□□□□ -0.06
CA1-219ENST00000523022 ATF5Q9Y2D1 282 aaPredicted RBP14.61□□□□□ -0.07
CA1-219ENST00000523022 CECR2Q9BXF3 1484 aa14.61□□□□□ -0.07
CA1-219ENST00000523022 CHRDL2Q6WN34 429 aa14.56□□□□□ -0.08
CA1-219ENST00000523022 EIF4G1Q04637 1599 aaKnown RBP14.52□□□□□ -0.08
CA1-219ENST00000523022 ZBTB12Q9Y330 459 aaPredicted RBP14.48□□□□□ -0.09
CA1-219ENST00000523022 MROH2BQ7Z745 1585 aa14.45□□□□□ -0.1
CA1-219ENST00000523022 CC2D2AQ9P2K1 1620 aa14.44□□□□□ -0.1
CA1-219ENST00000523022 SMARCA4P51532 1647 aa14.42□□□□□ -0.1
CA1-219ENST00000523022 AKT1S1Q96B36 256 aa14.41□□□□□ -0.1
CA1-219ENST00000523022 BAZ1AQ9NRL2 1556 aaPredicted RBP14.41□□□□□ -0.1
CA1-219ENST00000523022 ZBTB22O15209 634 aa14.37□□□□□ -0.11
CA1-219ENST00000523022 OSCARQ8IYS5 282 aa14.37□□□□□ -0.11
CA1-219ENST00000523022 RSF1Q96T23 1441 aaPredicted RBP14.35□□□□□ -0.11
CA1-219ENST00000523022 WIZO95785 1651 aa14.31□□□□□ -0.12
CA1-219ENST00000523022 ATAD2BQ9ULI0 1458 aa14.31□□□□□ -0.12
CA1-219ENST00000523022 REM2Q8IYK8 340 aaPredicted RBP14.3□□□□□ -0.12
CA1-219ENST00000523022 SUPT5HO00267 1087 aaKnown RBP14.29□□□□□ -0.12
CA1-219ENST00000523022 NCAPD3P42695 1498 aa14.25□□□□□ -0.13
CA1-219ENST00000523022 SMARCA2P51531 1590 aa14.23□□□□□ -0.13
CA1-219ENST00000523022 PEG3Q9GZU2 1588 aa14.22□□□□□ -0.13
CA1-219ENST00000523022 ATXN8OSP0DMR3 200 aa14.2□□□□□ -0.14
CA1-219ENST00000523022 BAZ1BQ9UIG0 1483 aaKnown RBP14.18□□□□□ -0.14
CA1-219ENST00000523022 PIP4P2Q8N4L2 257 aa14.17□□□□□ -0.14
CA1-219ENST00000523022 PITPNM1O00562 1244 aa14.14□□□□□ -0.15
CA1-219ENST00000523022 HMGXB3Q12766 1538 aa14.13□□□□□ -0.15
CA1-219ENST00000523022 FBLN2P98095 1184 aa14.1□□□□□ -0.15
CA1-219ENST00000523022 SP7Q8TDD2 431 aaPredicted RBP14.1□□□□□ -0.15
CA1-219ENST00000523022 TOP2AP11388 1531 aaKnown RBP14.08□□□□□ -0.16
CA1-219ENST00000523022 HAX1O00165 279 aa14.05□□□□□ -0.16
CA1-219ENST00000523022 SPDYE2BA6NHP3 402 aa14.02□□□□□ -0.17
CA1-219ENST00000523022 SPDYE6P0CI01 402 aa14.02□□□□□ -0.17
CA1-219ENST00000523022 FXR2P51116 673 aaKnown RBP eCLIP14.02□□□□□ -0.17
CA1-219ENST00000523022 SPDYE2Q495Y8 402 aa14.02□□□□□ -0.17
CA1-219ENST00000523022 CCDC88BA6NC98 1476 aa14□□□□□ -0.17
CA1-219ENST00000523022 NESP48681 1621 aa13.94□□□□□ -0.18
CA1-219ENST00000523022 CLEC11AQ9Y240 323 aa13.92□□□□□ -0.18
CA1-219ENST00000523022 MKRN4PQ13434 485 aaPredicted RBP13.9□□□□□ -0.18
CA1-219ENST00000523022 ZNF692Q9BU19 519 aaPredicted RBP13.89□□□□□ -0.19
CA1-219ENST00000523022 CADPSQ9ULU8 1353 aa13.87□□□□□ -0.19
CA1-219ENST00000523022 SPDYE1Q8NFV5 336 aaPredicted RBP13.85□□□□□ -0.19
CA1-219ENST00000523022 CFTRP13569 1480 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms