RNA–Protein interactions for RNA: ENST00000612624.4

SMIM11B-201, Transcript of small integral membrane protein 11B, humanhuman

TSL 1 (best) BASIC

Gene SMIM11B, Length 1,021 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11B-201ENST00000612624 AEBP2Q6ZN18 517 aaPredicted RBP21.64■■□□□ 1.05
SMIM11B-201ENST00000612624 CHIC1Q5VXU3 224 aa21.62■■□□□ 1.05
SMIM11B-201ENST00000612624 NISCHQ9Y2I1 1504 aa19.21■□□□□ 0.67
SMIM11B-201ENST00000612624 PHF23Q9BUL5 403 aaPredicted RBP19.07■□□□□ 0.64
SMIM11B-201ENST00000612624 SENP3Q9H4L4 574 aaPredicted RBP18.26■□□□□ 0.51
SMIM11B-201ENST00000612624 ABCC9O60706 1549 aa18.23■□□□□ 0.51
SMIM11B-201ENST00000612624 DNAJC5BQ9UF47 199 aa17.86■□□□□ 0.45
SMIM11B-201ENST00000612624 PLPPR3Q6T4P5 718 aa17.77■□□□□ 0.44
SMIM11B-201ENST00000612624 CCDC180Q9P1Z9 1646 aa17.56■□□□□ 0.4
SMIM11B-201ENST00000612624 RB1CC1Q8TDY2 1594 aa17.11■□□□□ 0.33
SMIM11B-201ENST00000612624 DNAJC5Q9H3Z4 198 aa17.09■□□□□ 0.33
SMIM11B-201ENST00000612624 FOXD1Q16676 465 aa16.9■□□□□ 0.3
SMIM11B-201ENST00000612624 NACADO15069 1562 aa16.85■□□□□ 0.29
SMIM11B-201ENST00000612624 PABPN1Q86U42 306 aaKnown RBP eCLIP16.84■□□□□ 0.29
SMIM11B-201ENST00000612624 ADRA2BP18089 450 aa16.65■□□□□ 0.26
SMIM11B-201ENST00000612624 PPP6R1Q9UPN7 881 aa16.65■□□□□ 0.26
SMIM11B-201ENST00000612624 BICRAQ9NZM4 1560 aa16.62■□□□□ 0.25
SMIM11B-201ENST00000612624 CECR2Q9BXF3 1484 aa16.6■□□□□ 0.25
SMIM11B-201ENST00000612624 SHROOM4Q9ULL8 1493 aa16.54■□□□□ 0.24
SMIM11B-201ENST00000612624 UNC13AQ9UPW8 1703 aa16.5■□□□□ 0.23
SMIM11B-201ENST00000612624 MYO15BQ96JP2 1530 aa16.5■□□□□ 0.23
SMIM11B-201ENST00000612624 CC2D2AQ9P2K1 1620 aa16.45■□□□□ 0.22
SMIM11B-201ENST00000612624 DCAF8L2P0C7V8 631 aa16.33■□□□□ 0.2
SMIM11B-201ENST00000612624 EIF4G1Q04637 1599 aaKnown RBP16.28■□□□□ 0.2
SMIM11B-201ENST00000612624 CUX2O14529 1486 aa16.22■□□□□ 0.19
SMIM11B-201ENST00000612624 PIAS4Q8N2W9 510 aaPredicted RBP16.05■□□□□ 0.16
SMIM11B-201ENST00000612624 ZCCHC6Q5VYS8 1495 aaKnown RBP15.96■□□□□ 0.14
SMIM11B-201ENST00000612624 DCAF1Q9Y4B6 1507 aa15.94■□□□□ 0.14
SMIM11B-201ENST00000612624 KCNA4P22459 653 aa15.93■□□□□ 0.14
SMIM11B-201ENST00000612624 SCRIBQ14160 1630 aa15.86■□□□□ 0.13
SMIM11B-201ENST00000612624 ERCC6Q03468 1493 aa15.84■□□□□ 0.13
SMIM11B-201ENST00000612624 TRIM41Q8WV44 630 aa15.8■□□□□ 0.12
SMIM11B-201ENST00000612624 PPP4R3CPQ6ZMV5 832 aa15.71■□□□□ 0.11
SMIM11B-201ENST00000612624 NCAPD3P42695 1498 aa15.62■□□□□ 0.09
SMIM11B-201ENST00000612624 MSH5O43196 834 aa15.61■□□□□ 0.09
SMIM11B-201ENST00000612624 THOC2Q8NI27 1593 aaKnown RBP15.49■□□□□ 0.07
SMIM11B-201ENST00000612624 NESP48681 1621 aa15.43■□□□□ 0.06
SMIM11B-201ENST00000612624 NCBP3Q53F19 620 aaKnown RBP15.43■□□□□ 0.06
SMIM11B-201ENST00000612624 HMGXB3Q12766 1538 aa15.39■□□□□ 0.05
SMIM11B-201ENST00000612624 EHMT2Q96KQ7 1210 aa15.39■□□□□ 0.05
SMIM11B-201ENST00000612624 ATAD2BQ9ULI0 1458 aa15.39■□□□□ 0.05
SMIM11B-201ENST00000612624 LAMC3Q9Y6N6 1575 aa15.31■□□□□ 0.04
SMIM11B-201ENST00000612624 SMARCA2P51531 1590 aa15.3■□□□□ 0.04
SMIM11B-201ENST00000612624 OSCARQ8IYS5 282 aa15.29■□□□□ 0.04
SMIM11B-201ENST00000612624 PDS5BQ9NTI5 1447 aa15.28■□□□□ 0.04
SMIM11B-201ENST00000612624 SLC4A1APQ9BWU0 796 aaKnown RBP15.24■□□□□ 0.03
SMIM11B-201ENST00000612624 NPM3O75607 178 aaKnown RBP15.23■□□□□ 0.03
SMIM11B-201ENST00000612624 SCAF1Q9H7N4 1312 aaKnown RBP15.21■□□□□ 0.03
SMIM11B-201ENST00000612624 BAZ1AQ9NRL2 1556 aaPredicted RBP15.2■□□□□ 0.02
SMIM11B-201ENST00000612624 WDR62O43379 1518 aa15.17■□□□□ 0.02
SMIM11B-201ENST00000612624 MRC2Q9UBG0 1479 aa15.16■□□□□ 0.02
SMIM11B-201ENST00000612624 CNKSR2Q8WXI2 1034 aa15.16■□□□□ 0.02
SMIM11B-201ENST00000612624 BAZ1BQ9UIG0 1483 aaKnown RBP15.14■□□□□ 0.01
SMIM11B-201ENST00000612624 KIF21AQ7Z4S6 1674 aa15.13■□□□□ 0.01
SMIM11B-201ENST00000612624 PEG3Q9GZU2 1588 aa15.09■□□□□ 0.01
SMIM11B-201ENST00000612624 SMARCA4P51532 1647 aa15.09■□□□□ 0.01
SMIM11B-201ENST00000612624 CADPSQ9ULU8 1353 aa15.07■□□□□ 0
SMIM11B-201ENST00000612624 RIMBP3CA6NJZ7 1639 aa15.06■□□□□ 0
SMIM11B-201ENST00000612624 RIMBP3BA6NNM3 1639 aa15.06■□□□□ 0
SMIM11B-201ENST00000612624 RIMBP3Q9UFD9 1639 aa15.06■□□□□ 0
SMIM11B-201ENST00000612624 ARHGEF11O15085 1522 aa15.02□□□□□ -0.01
SMIM11B-201ENST00000612624 CSRNP3Q8WYN3 585 aa14.99□□□□□ -0.01
SMIM11B-201ENST00000612624 MAPK8IP2Q13387 824 aaPredicted RBP14.96□□□□□ -0.01
SMIM11B-201ENST00000612624 TRHP20396 242 aaPredicted RBP14.93□□□□□ -0.02
SMIM11B-201ENST00000612624 CEP164Q9UPV0 1460 aa14.92□□□□□ -0.02
SMIM11B-201ENST00000612624 CYB5RLQ6IPT4 315 aa14.89□□□□□ -0.03
SMIM11B-201ENST00000612624 FANCD2Q9BXW9 1451 aa14.83□□□□□ -0.03
SMIM11B-201ENST00000612624 POTEDQ86YR6 584 aa14.82□□□□□ -0.04
SMIM11B-201ENST00000612624 ARAP1Q96P48 1450 aa14.82□□□□□ -0.04
SMIM11B-201ENST00000612624 RSF1Q96T23 1441 aaPredicted RBP14.78□□□□□ -0.04
SMIM11B-201ENST00000612624 MROH2BQ7Z745 1585 aa14.77□□□□□ -0.04
SMIM11B-201ENST00000612624 RNF216Q9NWF9 866 aaPredicted RBP14.75□□□□□ -0.05
SMIM11B-201ENST00000612624 CFTRP13569 1480 aa14.75□□□□□ -0.05
SMIM11B-201ENST00000612624 URB2Q14146 1524 aaKnown RBP14.74□□□□□ -0.05
SMIM11B-201ENST00000612624 IFT140Q96RY7 1462 aa14.7□□□□□ -0.06
SMIM11B-201ENST00000612624 ZBTB22O15209 634 aa14.69□□□□□ -0.06
SMIM11B-201ENST00000612624 WIZO95785 1651 aa14.68□□□□□ -0.06
SMIM11B-201ENST00000612624 DMRT2Q9Y5R5 561 aa14.67□□□□□ -0.06
SMIM11B-201ENST00000612624 ZNF608Q9ULD9 1512 aaPredicted RBP14.66□□□□□ -0.06
SMIM11B-201ENST00000612624 ILDR1Q86SU0 546 aaPredicted RBP14.63□□□□□ -0.07
SMIM11B-201ENST00000612624 HOXD11P31277 338 aaPredicted RBP14.57□□□□□ -0.08
SMIM11B-201ENST00000612624 EIF4G3O43432 1585 aaKnown RBP14.52□□□□□ -0.08
SMIM11B-201ENST00000612624 FOXD4L1Q9NU39 408 aa14.52□□□□□ -0.09
SMIM11B-201ENST00000612624 CLASP1Q7Z460 1538 aa14.46□□□□□ -0.09
SMIM11B-201ENST00000612624 ABCC8Q09428 1581 aa14.46□□□□□ -0.09
SMIM11B-201ENST00000612624 CHD1O14646 1710 aa14.46□□□□□ -0.1
SMIM11B-201ENST00000612624 TOPBP1Q92547 1522 aa14.46□□□□□ -0.1
SMIM11B-201ENST00000612624 TOP2AP11388 1531 aaKnown RBP14.44□□□□□ -0.1
SMIM11B-201ENST00000612624 AQRO60306 1485 aaKnown RBP eCLIP14.43□□□□□ -0.1
SMIM11B-201ENST00000612624 FBLN2P98095 1184 aa14.41□□□□□ -0.1
SMIM11B-201ENST00000612624 TARBP1Q13395 1621 aaKnown RBP14.37□□□□□ -0.11
SMIM11B-201ENST00000612624 GAPVD1Q14C86 1478 aa14.36□□□□□ -0.11
SMIM11B-201ENST00000612624 SYNJ1O43426 1573 aa14.34□□□□□ -0.11
SMIM11B-201ENST00000612624 DNMBPQ6XZF7 1577 aa14.33□□□□□ -0.12
SMIM11B-201ENST00000612624 SUPT5HO00267 1087 aaKnown RBP14.31□□□□□ -0.12
SMIM11B-201ENST00000612624 PRDM2Q13029 1718 aa14.3□□□□□ -0.12
SMIM11B-201ENST00000612624 WDR97A6NE52 1622 aa14.3□□□□□ -0.12
SMIM11B-201ENST00000612624 KDM4FA0A1W2PPD8 638 aa14.29□□□□□ -0.12
SMIM11B-201ENST00000612624 MAGI1Q96QZ7 1491 aaPredicted RBP14.29□□□□□ -0.12
SMIM11B-201ENST00000612624 POLA1P09884 1462 aaPredicted RBP14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 114.6 ms