RNA–Protein interactions for RNA: ENST00000457602.1

LINC01888-202, Transcript of long intergenic non-protein coding RNA 1888, humanhuman

TSL 2 BASIC

Gene LINC01888, Length 574 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01888-202ENST00000457602 AEBP2Q6ZN18 517 aaPredicted RBP28.62■■■□□ 2.17
LINC01888-202ENST00000457602 CHIC1Q5VXU3 224 aa27.62■■■□□ 2.01
LINC01888-202ENST00000457602 PHF23Q9BUL5 403 aaPredicted RBP24.29■■□□□ 1.48
LINC01888-202ENST00000457602 SENP3Q9H4L4 574 aaPredicted RBP24.27■■□□□ 1.48
LINC01888-202ENST00000457602 FOXD1Q16676 465 aa22.59■■□□□ 1.21
LINC01888-202ENST00000457602 PLPPR3Q6T4P5 718 aa22.25■■□□□ 1.15
LINC01888-202ENST00000457602 PPP6R1Q9UPN7 881 aa21.51■■□□□ 1.03
LINC01888-202ENST00000457602 ADRA2BP18089 450 aa21.44■■□□□ 1.02
LINC01888-202ENST00000457602 PIAS4Q8N2W9 510 aaPredicted RBP21.18■□□□□ 0.98
LINC01888-202ENST00000457602 MSH5O43196 834 aa20.91■□□□□ 0.94
LINC01888-202ENST00000457602 NISCHQ9Y2I1 1504 aa20.39■□□□□ 0.85
LINC01888-202ENST00000457602 POTEDQ86YR6 584 aa19.77■□□□□ 0.76
LINC01888-202ENST00000457602 PPP4R3CPQ6ZMV5 832 aa19.57■□□□□ 0.72
LINC01888-202ENST00000457602 SCAF1Q9H7N4 1312 aaKnown RBP19.54■□□□□ 0.72
LINC01888-202ENST00000457602 MAPK8IP2Q13387 824 aaPredicted RBP19.54■□□□□ 0.72
LINC01888-202ENST00000457602 DMRT2Q9Y5R5 561 aa19.36■□□□□ 0.69
LINC01888-202ENST00000457602 CNKSR2Q8WXI2 1034 aa19.09■□□□□ 0.65
LINC01888-202ENST00000457602 NCBP3Q53F19 620 aaKnown RBP18.91■□□□□ 0.62
LINC01888-202ENST00000457602 HOXD11P31277 338 aaPredicted RBP18.85■□□□□ 0.61
LINC01888-202ENST00000457602 RNF216Q9NWF9 866 aaPredicted RBP18.81■□□□□ 0.6
LINC01888-202ENST00000457602 KCNA4P22459 653 aa18.8■□□□□ 0.6
LINC01888-202ENST00000457602 NPM3O75607 178 aaKnown RBP18.72■□□□□ 0.59
LINC01888-202ENST00000457602 DCAF8L1A6NGE4 600 aa18.39■□□□□ 0.53
LINC01888-202ENST00000457602 ABCC9O60706 1549 aa18.34■□□□□ 0.53
LINC01888-202ENST00000457602 DNAJC5BQ9UF47 199 aa18.32■□□□□ 0.52
LINC01888-202ENST00000457602 CCDC180Q9P1Z9 1646 aa18.27■□□□□ 0.52
LINC01888-202ENST00000457602 RNF39Q9H2S5 420 aa17.93■□□□□ 0.46
LINC01888-202ENST00000457602 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.85■□□□□ 0.45
LINC01888-202ENST00000457602 SLC4A2P04920 1241 aa17.79■□□□□ 0.44
LINC01888-202ENST00000457602 SLC4A1APQ9BWU0 796 aaKnown RBP17.79■□□□□ 0.44
LINC01888-202ENST00000457602 CACNB1Q02641 598 aaPredicted RBP17.73■□□□□ 0.43
LINC01888-202ENST00000457602 C1QBPQ07021 282 aaKnown RBP17.67■□□□□ 0.42
LINC01888-202ENST00000457602 U3KPZ7 1027 aaPredicted RBP17.63■□□□□ 0.41
LINC01888-202ENST00000457602 RB1CC1Q8TDY2 1594 aa17.43■□□□□ 0.38
LINC01888-202ENST00000457602 FOXD4L1Q9NU39 408 aa17.37■□□□□ 0.37
LINC01888-202ENST00000457602 ZBTB22O15209 634 aa17.34■□□□□ 0.37
LINC01888-202ENST00000457602 DCAF8L2P0C7V8 631 aa17.34■□□□□ 0.37
LINC01888-202ENST00000457602 NACADO15069 1562 aa17.29■□□□□ 0.36
LINC01888-202ENST00000457602 MYCNP04198 464 aaPredicted RBP17.28■□□□□ 0.36
LINC01888-202ENST00000457602 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.21■□□□□ 0.35
LINC01888-202ENST00000457602 HNRNPUL2Q1KMD3 747 aaKnown RBP17.21■□□□□ 0.35
LINC01888-202ENST00000457602 SPINK5Q9NQ38 1064 aaPredicted RBP17.2■□□□□ 0.34
LINC01888-202ENST00000457602 SAMD1Q6SPF0 538 aaPredicted RBP17.16■□□□□ 0.34
LINC01888-202ENST00000457602 PABPN1Q86U42 306 aaKnown RBP eCLIP17.1■□□□□ 0.33
LINC01888-202ENST00000457602 APLP2Q06481 763 aa17.09■□□□□ 0.33
LINC01888-202ENST00000457602 CAPN15O75808 1086 aa17.08■□□□□ 0.32
LINC01888-202ENST00000457602 MYO15BQ96JP2 1530 aa17.02■□□□□ 0.32
LINC01888-202ENST00000457602 UNC13AQ9UPW8 1703 aa16.99■□□□□ 0.31
LINC01888-202ENST00000457602 DSG3P32926 999 aa16.95■□□□□ 0.3
LINC01888-202ENST00000457602 CSRNP3Q8WYN3 585 aa16.95■□□□□ 0.3
LINC01888-202ENST00000457602 ZNF219Q9P2Y4 722 aaPredicted RBP16.95■□□□□ 0.3
LINC01888-202ENST00000457602 TRHP20396 242 aaPredicted RBP16.92■□□□□ 0.3
LINC01888-202ENST00000457602 EHMT2Q96KQ7 1210 aa16.91■□□□□ 0.3
LINC01888-202ENST00000457602 ZCCHC6Q5VYS8 1495 aaKnown RBP16.89■□□□□ 0.29
LINC01888-202ENST00000457602 BICRAQ9NZM4 1560 aa16.88■□□□□ 0.29
LINC01888-202ENST00000457602 ATF5Q9Y2D1 282 aaPredicted RBP16.87■□□□□ 0.29
LINC01888-202ENST00000457602 DCAF1Q9Y4B6 1507 aa16.81■□□□□ 0.28
LINC01888-202ENST00000457602 ATXN8OSP0DMR3 200 aa16.8■□□□□ 0.28
LINC01888-202ENST00000457602 ABCB7O75027 752 aa16.75■□□□□ 0.27
LINC01888-202ENST00000457602 SCRIBQ14160 1630 aa16.7■□□□□ 0.26
LINC01888-202ENST00000457602 SHROOM4Q9ULL8 1493 aa16.66■□□□□ 0.26
LINC01888-202ENST00000457602 POLA2Q14181 598 aa16.61■□□□□ 0.25
LINC01888-202ENST00000457602 CC2D2AQ9P2K1 1620 aa16.53■□□□□ 0.24
LINC01888-202ENST00000457602 CECR2Q9BXF3 1484 aa16.51■□□□□ 0.23
LINC01888-202ENST00000457602 EIF4G1Q04637 1599 aaKnown RBP16.5■□□□□ 0.23
LINC01888-202ENST00000457602 ZBTB12Q9Y330 459 aaPredicted RBP16.31■□□□□ 0.2
LINC01888-202ENST00000457602 MKRN4PQ13434 485 aaPredicted RBP16.15■□□□□ 0.18
LINC01888-202ENST00000457602 RBM42Q9BTD8 480 aaKnown RBP16.11■□□□□ 0.17
LINC01888-202ENST00000457602 FBLN2P98095 1184 aa16.09■□□□□ 0.17
LINC01888-202ENST00000457602 OSCARQ8IYS5 282 aa16.09■□□□□ 0.17
LINC01888-202ENST00000457602 NCAPD3P42695 1498 aa15.97■□□□□ 0.15
LINC01888-202ENST00000457602 ATAD2BQ9ULI0 1458 aa15.93■□□□□ 0.14
LINC01888-202ENST00000457602 SMARCA4P51532 1647 aa15.9■□□□□ 0.14
LINC01888-202ENST00000457602 SPDYE2BA6NHP3 402 aa15.88■□□□□ 0.13
LINC01888-202ENST00000457602 SPDYE6P0CI01 402 aa15.88■□□□□ 0.13
LINC01888-202ENST00000457602 SPDYE2Q495Y8 402 aa15.88■□□□□ 0.13
LINC01888-202ENST00000457602 SMARCA2P51531 1590 aa15.87■□□□□ 0.13
LINC01888-202ENST00000457602 AKT1S1Q96B36 256 aa15.87■□□□□ 0.13
LINC01888-202ENST00000457602 ERCC6Q03468 1493 aa15.85■□□□□ 0.13
LINC01888-202ENST00000457602 BAZ1AQ9NRL2 1556 aaPredicted RBP15.84■□□□□ 0.13
LINC01888-202ENST00000457602 HMGXB3Q12766 1538 aa15.84■□□□□ 0.13
LINC01888-202ENST00000457602 BAZ1BQ9UIG0 1483 aaKnown RBP15.8■□□□□ 0.12
LINC01888-202ENST00000457602 DNAJC5Q9H3Z4 198 aa15.77■□□□□ 0.12
LINC01888-202ENST00000457602 SSUH2Q9Y2M2 353 aa15.77■□□□□ 0.12
LINC01888-202ENST00000457602 CUX2O14529 1486 aa15.77■□□□□ 0.11
LINC01888-202ENST00000457602 NESP48681 1621 aa15.74■□□□□ 0.11
LINC01888-202ENST00000457602 MROH2BQ7Z745 1585 aa15.72■□□□□ 0.11
LINC01888-202ENST00000457602 REM2Q8IYK8 340 aaPredicted RBP15.72■□□□□ 0.11
LINC01888-202ENST00000457602 PEG3Q9GZU2 1588 aa15.71■□□□□ 0.11
LINC01888-202ENST00000457602 ZNF692Q9BU19 519 aaPredicted RBP15.71■□□□□ 0.11
LINC01888-202ENST00000457602 LAMC3Q9Y6N6 1575 aa15.62■□□□□ 0.09
LINC01888-202ENST00000457602 POTEHQ6S545 545 aa15.59■□□□□ 0.09
LINC01888-202ENST00000457602 CHRDL2Q6WN34 429 aa15.58■□□□□ 0.08
LINC01888-202ENST00000457602 SPDYE4A6NLX3 237 aa15.56■□□□□ 0.08
LINC01888-202ENST00000457602 PITPNM1O00562 1244 aa15.56■□□□□ 0.08
LINC01888-202ENST00000457602 PDS5BQ9NTI5 1447 aa15.55■□□□□ 0.08
LINC01888-202ENST00000457602 WIZO95785 1651 aa15.54■□□□□ 0.08
LINC01888-202ENST00000457602 THOC2Q8NI27 1593 aaKnown RBP15.54■□□□□ 0.08
LINC01888-202ENST00000457602 KIF21AQ7Z4S6 1674 aa15.51■□□□□ 0.07
LINC01888-202ENST00000457602 CADPSQ9ULU8 1353 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms