RNA–Protein interactions for RNA: ENST00000428502.6

PSD3-203, Transcript of pleckstrin and Sec7 domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PSD3, Length 6,330 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSD3-203ENST00000428502 NISCHQ9Y2I1 1504 aa15.48■□□□□ 0.07
PSD3-203ENST00000428502 DCAF8L2P0C7V8 631 aa15.22■□□□□ 0.03
PSD3-203ENST00000428502 SUPT5HO00267 1087 aaKnown RBP14.3□□□□□ -0.12
PSD3-203ENST00000428502 SHROOM4Q9ULL8 1493 aa14.09□□□□□ -0.15
PSD3-203ENST00000428502 FAM9AQ8IZU1 332 aaPredicted RBP14.05□□□□□ -0.16
PSD3-203ENST00000428502 APLP2Q06481 763 aa13.94□□□□□ -0.18
PSD3-203ENST00000428502 PELP1Q8IZL8 1130 aaKnown RBP13.8□□□□□ -0.2
PSD3-203ENST00000428502 EHMT2Q96KQ7 1210 aa13.62□□□□□ -0.23
PSD3-203ENST00000428502 CCDC180Q9P1Z9 1646 aa13.56□□□□□ -0.24
PSD3-203ENST00000428502 TRIM41Q8WV44 630 aa13.45□□□□□ -0.26
PSD3-203ENST00000428502 ZEB1P37275 1124 aaPredicted RBP13.41□□□□□ -0.26
PSD3-203ENST00000428502 ATP1B4Q9UN42 357 aaPredicted RBP13.29□□□□□ -0.28
PSD3-203ENST00000428502 UBTFP17480 764 aaKnown RBP13.28□□□□□ -0.28
PSD3-203ENST00000428502 RANGAP1P46060 587 aaPredicted RBP13.21□□□□□ -0.29
PSD3-203ENST00000428502 CCER1Q8TC90 406 aaPredicted RBP13.2□□□□□ -0.3
PSD3-203ENST00000428502 TTBK1Q5TCY1 1321 aaPredicted RBP13.19□□□□□ -0.3
PSD3-203ENST00000428502 CENPBP07199 599 aaPredicted RBP13.18□□□□□ -0.3
PSD3-203ENST00000428502 PCGF6Q9BYE7 350 aa13.17□□□□□ -0.3
PSD3-203ENST00000428502 DCAF1Q9Y4B6 1507 aa13.09□□□□□ -0.31
PSD3-203ENST00000428502 MYO15BQ96JP2 1530 aa13.04□□□□□ -0.32
PSD3-203ENST00000428502 ERICH6Q7L0X2 663 aa13.03□□□□□ -0.32
PSD3-203ENST00000428502 NEFLP07196 543 aa12.98□□□□□ -0.33
PSD3-203ENST00000428502 ZCCHC6Q5VYS8 1495 aaKnown RBP12.96□□□□□ -0.33
PSD3-203ENST00000428502 MYT1LQ9UL68 1186 aa12.93□□□□□ -0.34
PSD3-203ENST00000428502 NACADO15069 1562 aa12.93□□□□□ -0.34
PSD3-203ENST00000428502 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.92□□□□□ -0.34
PSD3-203ENST00000428502 HNRNPUL2Q1KMD3 747 aaKnown RBP12.92□□□□□ -0.34
PSD3-203ENST00000428502 TRIM26Q12899 539 aaPredicted RBP12.89□□□□□ -0.35
PSD3-203ENST00000428502 ABCC9O60706 1549 aa12.87□□□□□ -0.35
PSD3-203ENST00000428502 RB1CC1Q8TDY2 1594 aa12.84□□□□□ -0.35
PSD3-203ENST00000428502 CHIC1Q5VXU3 224 aa12.69□□□□□ -0.38
PSD3-203ENST00000428502 ITGAEP38570 1179 aa12.69□□□□□ -0.38
PSD3-203ENST00000428502 PABPN1Q86U42 306 aaKnown RBP eCLIP12.67□□□□□ -0.38
PSD3-203ENST00000428502 PPARGC1BQ86YN6 1023 aaKnown RBP12.63□□□□□ -0.39
PSD3-203ENST00000428502 DAXXQ9UER7 740 aaPredicted RBP12.61□□□□□ -0.39
PSD3-203ENST00000428502 YTHDC1Q96MU7 727 aaKnown RBP12.61□□□□□ -0.39
PSD3-203ENST00000428502 POLR3GLQ9BT43 218 aa12.61□□□□□ -0.39
PSD3-203ENST00000428502 MYT1Q01538 1121 aa12.6□□□□□ -0.39
PSD3-203ENST00000428502 FAM50AQ14320 339 aaKnown RBP12.54□□□□□ -0.4
PSD3-203ENST00000428502 SLC4A1APQ9BWU0 796 aaKnown RBP12.51□□□□□ -0.41
PSD3-203ENST00000428502 LOC105371045A0A1W2PR82 267 aa12.51□□□□□ -0.41
PSD3-203ENST00000428502 TRIM52Q96A61 297 aa12.5□□□□□ -0.41
PSD3-203ENST00000428502 HRCP23327 699 aa12.5□□□□□ -0.41
PSD3-203ENST00000428502 FBLN2P98095 1184 aa12.43□□□□□ -0.42
PSD3-203ENST00000428502 CDK11AQ9UQ88 783 aaPredicted RBP12.43□□□□□ -0.42
PSD3-203ENST00000428502 SCRIBQ14160 1630 aa12.42□□□□□ -0.42
PSD3-203ENST00000428502 CSRNP3Q8WYN3 585 aa12.34□□□□□ -0.43
PSD3-203ENST00000428502 CLSPNQ9HAW4 1339 aa12.3□□□□□ -0.44
PSD3-203ENST00000428502 ZNF316A6NFI3 1004 aaPredicted RBP12.3□□□□□ -0.44
PSD3-203ENST00000428502 NEFMP07197 916 aa12.3□□□□□ -0.44
PSD3-203ENST00000428502 ANP32CO43423 234 aa12.3□□□□□ -0.44
PSD3-203ENST00000428502 NEUROD1Q13562 356 aa12.29□□□□□ -0.44
PSD3-203ENST00000428502 DIEXFQ68CQ4 756 aaKnown RBP12.29□□□□□ -0.44
PSD3-203ENST00000428502 ZBTB47Q9UFB7 747 aaPredicted RBP12.29□□□□□ -0.44
PSD3-203ENST00000428502 BAZ1AQ9NRL2 1556 aaPredicted RBP12.28□□□□□ -0.44
PSD3-203ENST00000428502 NPM1P06748 294 aaKnown RBP eCLIP12.27□□□□□ -0.45
PSD3-203ENST00000428502 ESF1Q9H501 851 aaKnown RBP12.27□□□□□ -0.45
PSD3-203ENST00000428502 CNGB1Q14028 1251 aaPredicted RBP12.26□□□□□ -0.45
PSD3-203ENST00000428502 BCANQ96GW7 911 aa12.23□□□□□ -0.45
PSD3-203ENST00000428502 ZNF326Q5BKZ1 582 aaKnown RBP12.22□□□□□ -0.45
PSD3-203ENST00000428502 RTL5Q5HYW3 569 aaPredicted RBP12.19□□□□□ -0.46
PSD3-203ENST00000428502 ACIN1Q9UKV3 1341 aaKnown RBP12.19□□□□□ -0.46
PSD3-203ENST00000428502 ZNF777Q9ULD5 760 aaPredicted RBP12.17□□□□□ -0.46
PSD3-203ENST00000428502 P3H3Q8IVL6 736 aa12.17□□□□□ -0.46
PSD3-203ENST00000428502 SMARCA2P51531 1590 aa12.16□□□□□ -0.46
PSD3-203ENST00000428502 EEA1Q15075 1411 aa12.14□□□□□ -0.47
PSD3-203ENST00000428502 CANXP27824 592 aaKnown RBP12.14□□□□□ -0.47
PSD3-203ENST00000428502 STAG3Q9UJ98 1225 aa12.12□□□□□ -0.47
PSD3-203ENST00000428502 TONSLQ96HA7 1378 aa12.08□□□□□ -0.48
PSD3-203ENST00000428502 ARID3CA6NKF2 412 aa12.07□□□□□ -0.48
PSD3-203ENST00000428502 CHMP7Q8WUX9 453 aaPredicted RBP12.06□□□□□ -0.48
PSD3-203ENST00000428502 SLC24A1O60721 1099 aa12.05□□□□□ -0.48
PSD3-203ENST00000428502 RSF1Q96T23 1441 aaPredicted RBP12.04□□□□□ -0.48
PSD3-203ENST00000428502 BAZ1BQ9UIG0 1483 aaKnown RBP12.02□□□□□ -0.48
PSD3-203ENST00000428502 TSPY4P0CV99 314 aa12.02□□□□□ -0.49
PSD3-203ENST00000428502 TSPY10P0CW01 314 aa12.02□□□□□ -0.49
PSD3-203ENST00000428502 MTUS2Q5JR59 1369 aa12.01□□□□□ -0.49
PSD3-203ENST00000428502 CHGAP10645 457 aaKnown RBP11.99□□□□□ -0.49
PSD3-203ENST00000428502 GOLGA3Q08378 1498 aa11.97□□□□□ -0.49
PSD3-203ENST00000428502 CLIP1P30622 1438 aa11.94□□□□□ -0.5
PSD3-203ENST00000428502 KIF27Q86VH2 1401 aa11.92□□□□□ -0.5
PSD3-203ENST00000428502 PLEKHD1A6NEE1 506 aa11.9□□□□□ -0.5
PSD3-203ENST00000428502 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.9□□□□□ -0.5
PSD3-203ENST00000428502 ERCC6Q03468 1493 aa11.9□□□□□ -0.5
PSD3-203ENST00000428502 ABCC8Q09428 1581 aa11.9□□□□□ -0.51
PSD3-203ENST00000428502 WRNQ14191 1432 aaPredicted RBP eCLIP11.89□□□□□ -0.51
PSD3-203ENST00000428502 ANP32AP39687 249 aaKnown RBP11.89□□□□□ -0.51
PSD3-203ENST00000428502 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.88□□□□□ -0.51
PSD3-203ENST00000428502 CEP164Q9UPV0 1460 aa11.87□□□□□ -0.51
PSD3-203ENST00000428502 TOP2AP11388 1531 aaKnown RBP11.86□□□□□ -0.51
PSD3-203ENST00000428502 UPF2Q9HAU5 1272 aaKnown RBP11.86□□□□□ -0.51
PSD3-203ENST00000428502 WDR43Q15061 677 aaKnown RBP eCLIP11.85□□□□□ -0.51
PSD3-203ENST00000428502 PDS5BQ9NTI5 1447 aa11.84□□□□□ -0.51
PSD3-203ENST00000428502 CHIC2Q9UKJ5 165 aa11.83□□□□□ -0.52
PSD3-203ENST00000428502 NCAPD3P42695 1498 aa11.82□□□□□ -0.52
PSD3-203ENST00000428502 GTF3C3Q9Y5Q9 886 aa11.82□□□□□ -0.52
PSD3-203ENST00000428502 CDCA8Q53HL2 280 aa11.82□□□□□ -0.52
PSD3-203ENST00000428502 PPP1R15AO75807 674 aaPredicted RBP11.81□□□□□ -0.52
PSD3-203ENST00000428502 TMC1Q8TDI8 760 aa11.8□□□□□ -0.52
PSD3-203ENST00000428502 HMGXB3Q12766 1538 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms