Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 PDE4C-211ENST00000597360 3511 ntTSL 211.93□□□□□ -0.58e-6■■□□□ 12.9
PRPF8Q6P2Q9 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC11.92□□□□□ -0.58e-6■■□□□ 12.9
PRPF8Q6P2Q9 N4BP2L1-208ENST00000495479 541 ntTSL 211.84□□□□□ -0.518e-6■■□□□ 12.9
PRPF8Q6P2Q9 N4BP2L1-201ENST00000343281 1789 ntTSL 511.8□□□□□ -0.528e-6■■□□□ 12.9
PRPF8Q6P2Q9 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC11.72□□□□□ -0.538e-6■■□□□ 12.9
PRPF8Q6P2Q9 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC11.67□□□□□ -0.548e-6■■□□□ 12.9
PRPF8Q6P2Q9 SIRT2-210ENST00000443898 985 ntTSL 511.65□□□□□ -0.548e-6■■□□□ 12.9
PRPF8Q6P2Q9 SIRT2-212ENST00000451193 556 ntTSL 411.65□□□□□ -0.548e-6■■□□□ 12.9
PRPF8Q6P2Q9 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC11.62□□□□□ -0.558e-6■■□□□ 12.9
PRPF8Q6P2Q9 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC11.57□□□□□ -0.568e-6■■□□□ 12.9
PRPF8Q6P2Q9 TECPR1-217ENST00000490842 3488 ntTSL 1 (best)11.56□□□□□ -0.568e-6■■□□□ 12.9
PRPF8Q6P2Q9 TBC1D8-209ENST00000487392 373 ntTSL 511.52□□□□□ -0.578e-6■■□□□ 12.9
PRPF8Q6P2Q9 N4BP2L1-211ENST00000635178 2009 ntTSL 511.44□□□□□ -0.588e-6■■□□□ 12.9
PRPF8Q6P2Q9 SIRT2-208ENST00000423526 556 ntTSL 411.42□□□□□ -0.588e-6■■□□□ 12.9
PRPF8Q6P2Q9 SIRT2-209ENST00000437828 555 ntTSL 411.42□□□□□ -0.588e-6■■□□□ 12.9
PRPF8Q6P2Q9 ZFAND2B-215ENST00000468301 534 ntTSL 411.35□□□□□ -0.598e-6■■□□□ 12.9
PRPF8Q6P2Q9 N4BP2L1-207ENST00000472298 1423 ntTSL 211.16□□□□□ -0.628e-6■■□□□ 12.9
PRPF8Q6P2Q9 ZNF224-203ENST00000589060 1552 nt11.03□□□□□ -0.648e-6■■□□□ 12.9
PRPF8Q6P2Q9 DAPK1-211ENST00000475804 567 ntTSL 410.9□□□□□ -0.668e-6■■□□□ 12.9
PRPF8Q6P2Q9 TCEA3-204ENST00000461794 713 ntTSL 3 BASIC10.81□□□□□ -0.688e-6■■□□□ 12.9
PRPF8Q6P2Q9 SIRT2-205ENST00000407552 890 ntTSL 210.7□□□□□ -0.78e-6■■□□□ 12.9
PRPF8Q6P2Q9 SIRT2-217ENST00000491960 619 ntTSL 410.7□□□□□ -0.78e-6■■□□□ 12.9
PRPF8Q6P2Q9 PITPNM2-206ENST00000541244 663 ntTSL 310.69□□□□□ -0.77e-11■■□□□ 12.9
PRPF8Q6P2Q9 PDE4C-213ENST00000598111 1284 ntTSL 1 (best) BASIC10.5□□□□□ -0.738e-6■■□□□ 12.9
PRPF8Q6P2Q9 SIRT2-201ENST00000249396 2070 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.768e-6■■□□□ 12.9
PRPF8Q6P2Q9 SIRT2-204ENST00000392081 2062 ntAPPRIS ALT1 TSL 1 (best) BASIC10.3□□□□□ -0.768e-6■■□□□ 12.9
PRPF8Q6P2Q9 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC10.28□□□□□ -0.762e-6■■□□□ 12.9
PRPF8Q6P2Q9 SIRT2-206ENST00000414941 1251 ntTSL 510.23□□□□□ -0.778e-6■■□□□ 12.9
PRPF8Q6P2Q9 N4BP2L1-205ENST00000459716 2519 ntTSL 510.09□□□□□ -0.798e-6■■□□□ 12.9
PRPF8Q6P2Q9 VPS53-207ENST00000570510 570 ntTSL 410.01□□□□□ -0.818e-6■■□□□ 12.9
PRPF8Q6P2Q9 AIF1L-207ENST00000372309 3515 ntTSL 2 BASIC9.91□□□□□ -0.828e-6■■□□□ 12.9
PRPF8Q6P2Q9 AIF1L-201ENST00000247291 3364 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.828e-6■■□□□ 12.9
PRPF8Q6P2Q9 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.827e-11■■□□□ 12.9
PRPF8Q6P2Q9 SIRT2-211ENST00000447739 578 ntTSL 49.78□□□□□ -0.848e-6■■□□□ 12.9
PRPF8Q6P2Q9 NDUFA3-208ENST00000422029 694 ntTSL 39.77□□□□□ -0.858e-6■■□□□ 12.9
PRPF8Q6P2Q9 AIF1L-204ENST00000372300 3284 ntTSL 1 (best) BASIC9.74□□□□□ -0.858e-6■■□□□ 12.9
PRPF8Q6P2Q9 AIF1L-206ENST00000372302 3340 ntTSL 2 BASIC9.56□□□□□ -0.888e-6■■□□□ 12.9
PRPF8Q6P2Q9 TJP3-209ENST00000591493 856 ntTSL 29.55□□□□□ -0.882e-8■■□□□ 12.9
PRPF8Q6P2Q9 PDE4C-210ENST00000597297 1559 ntTSL 1 (best) BASIC9.45□□□□□ -0.98e-6■■□□□ 12.9
PRPF8Q6P2Q9 ZFAND2B-211ENST00000436556 741 ntTSL 59.43□□□□□ -0.98e-6■■□□□ 12.9
PRPF8Q6P2Q9 PDE4C-206ENST00000594465 2988 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.928e-6■■□□□ 12.9
PRPF8Q6P2Q9 PDE4C-214ENST00000599188 2101 ntTSL 59.28□□□□□ -0.928e-6■■□□□ 12.9
PRPF8Q6P2Q9 AL137247.1-201ENST00000461502 764 ntTSL 3 BASIC8.93□□□□□ -0.988e-6■■□□□ 12.9
PRPF8Q6P2Q9 AIF1L-202ENST00000372297 418 ntTSL 3 BASIC8.86□□□□□ -0.998e-6■■□□□ 12.9
PRPF8Q6P2Q9 AIF1L-208ENST00000372314 3398 ntTSL 28.85□□□□□ -0.998e-6■■□□□ 12.9
PRPF8Q6P2Q9 N4BP2L1-202ENST00000380130 3046 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.018e-6■■□□□ 12.9
PRPF8Q6P2Q9 PDE4C-203ENST00000447275 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.018e-6■■□□□ 12.9
PRPF8Q6P2Q9 SUPT6H-205ENST00000580471 578 ntTSL 28.66□□□□□ -1.028e-6■■□□□ 12.9
PRPF8Q6P2Q9 PGLS-205ENST00000598811 869 ntTSL 1 (best)8.6□□□□□ -1.038e-6■■□□□ 12.9
PRPF8Q6P2Q9 PI4KA-211ENST00000482030 655 ntTSL 28.52□□□□□ -1.055e-16■■□□□ 12.9
PRPF8Q6P2Q9 ZFAND2B-220ENST00000489197 855 ntTSL 38.35□□□□□ -1.078e-6■■□□□ 12.9
PRPF8Q6P2Q9 SUSD1-205ENST00000415074 842 ntTSL 38.07□□□□□ -1.128e-6■■□□□ 12.9
PRPF8Q6P2Q9 TRO-223ENST00000492142 485 ntTSL 38.03□□□□□ -1.128e-6■■□□□ 12.9
PRPF8Q6P2Q9 DAPK1-216ENST00000495281 853 ntTSL 37.9□□□□□ -1.148e-6■■□□□ 12.9
PRPF8Q6P2Q9 NCSTN-212ENST00000469159 856 ntTSL 27.35□□□□□ -1.238e-6■■□□□ 12.9
PRPF8Q6P2Q9 N4BP2L1-204ENST00000380139 2994 ntTSL 1 (best) BASIC7.3□□□□□ -1.248e-6■■□□□ 12.9
PRPF8Q6P2Q9 NCOR1-223ENST00000583226 614 ntTSL 57.25□□□□□ -1.258e-6■■□□□ 12.9
PRPF8Q6P2Q9 BIRC6-202ENST00000431454 508 ntTSL 36.57□□□□□ -1.368e-6■■□□□ 12.9
PRPF8Q6P2Q9 N4BP2L1-212ENST00000635608 2959 ntTSL 56.31□□□□□ -1.48e-6■■□□□ 12.9
PRPF8Q6P2Q9 CTDSPL-208ENST00000486978 609 ntTSL 35.85□□□□□ -1.478e-6■■□□□ 12.9
PRPF8Q6P2Q9 TCEA3-202ENST00000374602 575 ntTSL 35.84□□□□□ -1.478e-6■■□□□ 12.9
PRPF8Q6P2Q9 VPS53-219ENST00000576019 613 ntTSL 35.06□□□□□ -1.68e-6■■□□□ 12.9
PRPF8Q6P2Q9 DTNB-220ENST00000486555 536 ntTSL 45.05□□□□□ -1.68e-6■■□□□ 12.9
PRPF8Q6P2Q9 DTNB-223ENST00000489756 574 ntTSL 44.83□□□□□ -1.648e-6■■□□□ 12.9
PRPF8Q6P2Q9 SUSD1-208ENST00000528773 540 ntTSL 44.7□□□□□ -1.668e-6■■□□□ 12.9
PRPF8Q6P2Q9 SEC24D-212ENST00000511715 2969 ntTSL 23.82□□□□□ -1.88e-6■■□□□ 12.9
PRPF8Q6P2Q9 MTUS1-225ENST00000523718 3354 ntTSL 1 (best)10.21□□□□□ -0.777e-10■■□□□ 12.9
PRPF8Q6P2Q9 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.522e-6■■□□□ 12.9
PRPF8Q6P2Q9 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC11.05□□□□□ -0.642e-6■■□□□ 12.9
PRPF8Q6P2Q9 SEMA3F-206ENST00000434342 3541 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.892e-6■■□□□ 12.9
PRPF8Q6P2Q9 BMP4-205ENST00000558984 1705 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.778e-19■■□□□ 12.9
PRPF8Q6P2Q9 BMP4-207ENST00000559501 1112 ntTSL 29.61□□□□□ -0.878e-19■■□□□ 12.9
PRPF8Q6P2Q9 BMP4-202ENST00000417573 1784 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.878e-19■■□□□ 12.9
PRPF8Q6P2Q9 BICRA-202ENST00000594866 532 ntAPPRIS ALT2 TSL 219.01■□□□□ 0.632e-6■■□□□ 12.9
PRPF8Q6P2Q9 DENND4B-213ENST00000531748 544 ntTSL 417.08■□□□□ 0.327e-8■■□□□ 12.9
PRPF8Q6P2Q9 ACSF2-212ENST00000507769 595 ntTSL 315.17■□□□□ 0.022e-7■■□□□ 12.9
PRPF8Q6P2Q9 VAPA-206ENST00000583475 939 ntTSL 21.67□□□□□ -2.142e-7■■□□□ 12.9
PRPF8Q6P2Q9 EBPL-202ENST00000378268 680 ntTSL 3 BASIC22.93■■□□□ 1.263e-14■■□□□ 12.9
PRPF8Q6P2Q9 GUSB-204ENST00000446111 933 ntTSL 1 (best)19.83■□□□□ 0.762e-15■■□□□ 12.9
PRPF8Q6P2Q9 RBM26-206ENST00000472143 2192 ntTSL 219.07■□□□□ 0.643e-14■■□□□ 12.9
PRPF8Q6P2Q9 AHI1-210ENST00000524469 1074 ntTSL 514.58□□□□□ -0.083e-14■■□□□ 12.9
PRPF8Q6P2Q9 AHI1-214ENST00000531527 516 ntTSL 314.05□□□□□ -0.163e-14■■□□□ 12.9
PRPF8Q6P2Q9 GUSB-211ENST00000476486 776 ntTSL 314.02□□□□□ -0.172e-15■■□□□ 12.9
PRPF8Q6P2Q9 KLHDC4-212ENST00000564396 563 ntTSL 512.55□□□□□ -0.44e-6■■□□□ 12.9
PRPF8Q6P2Q9 KLHDC4-226ENST00000569747 560 ntTSL 411.89□□□□□ -0.514e-6■■□□□ 12.9
PRPF8Q6P2Q9 NEDD9-201ENST00000379433 3341 ntTSL 1 (best) BASIC8.99□□□□□ -0.973e-14■■□□□ 12.9
PRPF8Q6P2Q9 NEDD9-203ENST00000397378 470 ntTSL 38.62□□□□□ -1.033e-14■■□□□ 12.9
PRPF8Q6P2Q9 NEDD9-211ENST00000508546 581 ntTSL 58.56□□□□□ -1.043e-14■■□□□ 12.9
PRPF8Q6P2Q9 NEDD9-214ENST00000513989 587 ntTSL 48.44□□□□□ -1.063e-14■■□□□ 12.9
PRPF8Q6P2Q9 AHI1-208ENST00000488690 712 ntTSL 5 BASIC-0.6□□□□□ -2.513e-14■■□□□ 12.9
PRPF8Q6P2Q9 BAIAP2-215ENST00000573894 657 ntTSL 310.76□□□□□ -0.694e-7■■□□□ 12.9
PRPF8Q6P2Q9 AKT1-205ENST00000553506 2830 ntTSL 215.25■□□□□ 0.037e-8■■□□□ 12.9
PRPF8Q6P2Q9 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.249e-8■■□□□ 12.9
PRPF8Q6P2Q9 GSDMD-211ENST00000531184 2213 ntTSL 215.06■□□□□ 09e-8■■□□□ 12.9
PRPF8Q6P2Q9 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.059e-8■■□□□ 12.9
PRPF8Q6P2Q9 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC13.74□□□□□ -0.219e-8■■□□□ 12.9
PRPF8Q6P2Q9 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.041e-6■■□□□ 12.9
PRPF8Q6P2Q9 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC14.12□□□□□ -0.151e-6■■□□□ 12.9
PRPF8Q6P2Q9 C2CD2L-207ENST00000529874 1087 ntTSL 39.77□□□□□ -0.851e-6■■□□□ 12.9
PRPF8Q6P2Q9 C2CD2L-202ENST00000525598 5931 ntTSL 1 (best)9.14□□□□□ -0.951e-6■■□□□ 12.9
Retrieved 100 of 73,762 protein–RNA pairs in 742.6 ms