RNA–Protein interactions for RNA: ENST00000531184.5

GSDMD-211, Transcript of gasdermin D, humanhuman

TSL 2

Gene GSDMD, Length 2,213 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-211ENST00000531184 NISCHQ9Y2I1 1504 aa42.98■■■■■ 4.47
GSDMD-211ENST00000531184 CCDC180Q9P1Z9 1646 aa37.86■■■■□ 3.65
GSDMD-211ENST00000531184 ABCC9O60706 1549 aa36.82■■■■□ 3.49
GSDMD-211ENST00000531184 DCAF8L2P0C7V8 631 aa35.96■■■■□ 3.35
GSDMD-211ENST00000531184 ZCCHC6Q5VYS8 1495 aaKnown RBP35.89■■■■□ 3.34
GSDMD-211ENST00000531184 PELP1Q8IZL8 1130 aaKnown RBP35.53■■■■□ 3.28
GSDMD-211ENST00000531184 NACADO15069 1562 aa35.53■■■■□ 3.28
GSDMD-211ENST00000531184 DCAF1Q9Y4B6 1507 aa35.48■■■■□ 3.27
GSDMD-211ENST00000531184 RB1CC1Q8TDY2 1594 aa35.47■■■■□ 3.27
GSDMD-211ENST00000531184 MYO15BQ96JP2 1530 aa35.42■■■■□ 3.26
GSDMD-211ENST00000531184 HRCP23327 699 aa35.24■■■■□ 3.23
GSDMD-211ENST00000531184 SCRIBQ14160 1630 aa34.76■■■■□ 3.16
GSDMD-211ENST00000531184 UNC13AQ9UPW8 1703 aa34.71■■■■□ 3.15
GSDMD-211ENST00000531184 PABPN1Q86U42 306 aaKnown RBP eCLIP34.58■■■■□ 3.135e-7■■■■■ 27.2
GSDMD-211ENST00000531184 MYT1Q01538 1121 aa34.53■■■■□ 3.12
GSDMD-211ENST00000531184 SHROOM4Q9ULL8 1493 aa34.48■■■■□ 3.11
GSDMD-211ENST00000531184 BICRAQ9NZM4 1560 aa34.45■■■■□ 3.11
GSDMD-211ENST00000531184 PPARGC1BQ86YN6 1023 aaKnown RBP34.11■■■■□ 3.05
GSDMD-211ENST00000531184 PCGF6Q9BYE7 350 aa33.82■■■■□ 3
GSDMD-211ENST00000531184 SCAF1Q9H7N4 1312 aaKnown RBP33.69■■■□□ 2.98
GSDMD-211ENST00000531184 CECR2Q9BXF3 1484 aa33.54■■■□□ 2.96
GSDMD-211ENST00000531184 EIF4G1Q04637 1599 aaKnown RBP33.5■■■□□ 2.95
GSDMD-211ENST00000531184 DNAJC5BQ9UF47 199 aa33.46■■■□□ 2.95
GSDMD-211ENST00000531184 CC2D2AQ9P2K1 1620 aa33.25■■■□□ 2.91
GSDMD-211ENST00000531184 BAZ1AQ9NRL2 1556 aaPredicted RBP33.25■■■□□ 2.91
GSDMD-211ENST00000531184 SMARCA4P51532 1647 aa33.23■■■□□ 2.91
GSDMD-211ENST00000531184 MROH2BQ7Z745 1585 aa33.2■■■□□ 2.91
GSDMD-211ENST00000531184 RSF1Q96T23 1441 aaPredicted RBP33■■■□□ 2.87
GSDMD-211ENST00000531184 ATAD2BQ9ULI0 1458 aa32.97■■■□□ 2.87
GSDMD-211ENST00000531184 ZEB1P37275 1124 aaPredicted RBP32.96■■■□□ 2.87
GSDMD-211ENST00000531184 CHIC1Q5VXU3 224 aa32.9■■■□□ 2.86
GSDMD-211ENST00000531184 SMARCA2P51531 1590 aa32.88■■■□□ 2.85
GSDMD-211ENST00000531184 WIZO95785 1651 aa32.86■■■□□ 2.85
GSDMD-211ENST00000531184 SUPT5HO00267 1087 aaKnown RBP32.86■■■□□ 2.85
GSDMD-211ENST00000531184 NCAPD3P42695 1498 aa32.84■■■□□ 2.85
GSDMD-211ENST00000531184 PEG3Q9GZU2 1588 aa32.84■■■□□ 2.85
GSDMD-211ENST00000531184 TRIM26Q12899 539 aaPredicted RBP32.77■■■□□ 2.84
GSDMD-211ENST00000531184 TTBK1Q5TCY1 1321 aaPredicted RBP32.74■■■□□ 2.83
GSDMD-211ENST00000531184 BAZ1BQ9UIG0 1483 aaKnown RBP32.71■■■□□ 2.83
GSDMD-211ENST00000531184 ACIN1Q9UKV3 1341 aaKnown RBP32.69■■■□□ 2.82
GSDMD-211ENST00000531184 HMGXB3Q12766 1538 aa32.66■■■□□ 2.82
GSDMD-211ENST00000531184 TOP2AP11388 1531 aaKnown RBP32.45■■■□□ 2.79
GSDMD-211ENST00000531184 NEUROD1Q13562 356 aa32.43■■■□□ 2.78
GSDMD-211ENST00000531184 GTF3C3Q9Y5Q9 886 aa32.34■■■□□ 2.77
GSDMD-211ENST00000531184 CENPBP07199 599 aaPredicted RBP32.2■■■□□ 2.75
GSDMD-211ENST00000531184 CCDC88BA6NC98 1476 aa32.16■■■□□ 2.74
GSDMD-211ENST00000531184 NESP48681 1621 aa32.03■■■□□ 2.72
GSDMD-211ENST00000531184 LOC105371045A0A1W2PR82 267 aa31.99■■■□□ 2.71
GSDMD-211ENST00000531184 CADPSQ9ULU8 1353 aa31.96■■■□□ 2.71
GSDMD-211ENST00000531184 LAMC3Q9Y6N6 1575 aa31.85■■■□□ 2.69
GSDMD-211ENST00000531184 CFTRP13569 1480 aa31.84■■■□□ 2.69
GSDMD-211ENST00000531184 BCL11AQ9H165 835 aa31.79■■■□□ 2.68
GSDMD-211ENST00000531184 PDS5BQ9NTI5 1447 aa31.67■■■□□ 2.66
GSDMD-211ENST00000531184 ERCC6Q03468 1493 aa31.65■■■□□ 2.66
GSDMD-211ENST00000531184 DIEXFQ68CQ4 756 aaKnown RBP31.6■■■□□ 2.65
GSDMD-211ENST00000531184 FANCD2Q9BXW9 1451 aa31.59■■■□□ 2.65
GSDMD-211ENST00000531184 KIF21AQ7Z4S6 1674 aa31.55■■■□□ 2.64
GSDMD-211ENST00000531184 PRDM2Q13029 1718 aa31.5■■■□□ 2.63
GSDMD-211ENST00000531184 FAM9AQ8IZU1 332 aaPredicted RBP31.48■■■□□ 2.63
GSDMD-211ENST00000531184 CEP164Q9UPV0 1460 aa31.47■■■□□ 2.63
GSDMD-211ENST00000531184 ANP32EQ9BTT0 268 aa31.34■■■□□ 2.61
GSDMD-211ENST00000531184 MRC2Q9UBG0 1479 aa31.31■■■□□ 2.6
GSDMD-211ENST00000531184 THOC2Q8NI27 1593 aaKnown RBP31.3■■■□□ 2.6
GSDMD-211ENST00000531184 URB2Q14146 1524 aaKnown RBP31.25■■■□□ 2.59
GSDMD-211ENST00000531184 ABCC8Q09428 1581 aa31.18■■■□□ 2.58
GSDMD-211ENST00000531184 PRKCSHP14314 528 aaPredicted RBP31.17■■■□□ 2.58
GSDMD-211ENST00000531184 WDR62O43379 1518 aa31.17■■■□□ 2.58
GSDMD-211ENST00000531184 TRIM41Q8WV44 630 aa31.16■■■□□ 2.58
GSDMD-211ENST00000531184 TOPBP1Q92547 1522 aa31.13■■■□□ 2.57
GSDMD-211ENST00000531184 CUX1P39880 1505 aa31.09■■■□□ 2.57
GSDMD-211ENST00000531184 CCER1Q8TC90 406 aaPredicted RBP31.09■■■□□ 2.57
GSDMD-211ENST00000531184 WRNQ14191 1432 aaPredicted RBP eCLIP31.08■■■□□ 2.57
GSDMD-211ENST00000531184 DNMBPQ6XZF7 1577 aa31.08■■■□□ 2.57
GSDMD-211ENST00000531184 CUX2O14529 1486 aa31.03■■■□□ 2.56
GSDMD-211ENST00000531184 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.02■■■□□ 2.56
GSDMD-211ENST00000531184 SYNJ1O43426 1573 aa30.98■■■□□ 2.55
GSDMD-211ENST00000531184 CLSPNQ9HAW4 1339 aa30.96■■■□□ 2.55
GSDMD-211ENST00000531184 YTHDC1Q96MU7 727 aaKnown RBP30.92■■■□□ 2.54
GSDMD-211ENST00000531184 POLA1P09884 1462 aaPredicted RBP30.91■■■□□ 2.54
GSDMD-211ENST00000531184 FGD5Q6ZNL6 1462 aa30.91■■■□□ 2.54
GSDMD-211ENST00000531184 TOP2BQ02880 1626 aa30.9■■■□□ 2.54
GSDMD-211ENST00000531184 CSRNP3Q8WYN3 585 aa30.88■■■□□ 2.53
GSDMD-211ENST00000531184 BIVM-ERCC5R4GMW8 1640 aa30.86■■■□□ 2.53
GSDMD-211ENST00000531184 ZNF316A6NFI3 1004 aaPredicted RBP30.85■■■□□ 2.53
GSDMD-211ENST00000531184 RAD54L2Q9Y4B4 1467 aa30.83■■■□□ 2.53
GSDMD-211ENST00000531184 SOGA1O94964 1423 aa30.81■■■□□ 2.52
GSDMD-211ENST00000531184 TSHZ2Q9NRE2 1034 aa30.77■■■□□ 2.52
GSDMD-211ENST00000531184 IFT140Q96RY7 1462 aa30.77■■■□□ 2.52
GSDMD-211ENST00000531184 ERICH6Q7L0X2 663 aa30.73■■■□□ 2.51
GSDMD-211ENST00000531184 TARBP1Q13395 1621 aaKnown RBP30.72■■■□□ 2.51
GSDMD-211ENST00000531184 ZNF608Q9ULD9 1512 aaPredicted RBP30.7■■■□□ 2.51
GSDMD-211ENST00000531184 SUPT16HQ9Y5B9 1047 aaKnown RBP30.66■■■□□ 2.5
GSDMD-211ENST00000531184 TDRD9Q8NDG6 1382 aaKnown RBP30.65■■■□□ 2.5
GSDMD-211ENST00000531184 MIER1Q8N108 512 aa30.64■■■□□ 2.5
GSDMD-211ENST00000531184 AQRO60306 1485 aaKnown RBP eCLIP30.61■■■□□ 2.49
GSDMD-211ENST00000531184 ABCA10Q8WWZ4 1543 aa30.59■■■□□ 2.49
GSDMD-211ENST00000531184 WDR97A6NE52 1622 aa30.53■■■□□ 2.48
GSDMD-211ENST00000531184 EIF4G3O43432 1585 aaKnown RBP30.51■■■□□ 2.47
GSDMD-211ENST00000531184 GAPVD1Q14C86 1478 aa30.44■■■□□ 2.46
GSDMD-211ENST00000531184 ABCA5Q8WWZ7 1642 aa30.4■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms