RNA–Protein interactions for RNA: ENST00000525598.1

C2CD2L-202, Transcript of C2CD2 like, humanhuman

TSL 1 (best)

Gene C2CD2L, Length 5,931 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD2L-202ENST00000525598 PELP1Q8IZL8 1130 aaKnown RBP20.1■□□□□ 0.81
C2CD2L-202ENST00000525598 MYT1Q01538 1121 aa19.89■□□□□ 0.77
C2CD2L-202ENST00000525598 ERICH6Q7L0X2 663 aa19.16■□□□□ 0.66
C2CD2L-202ENST00000525598 CCER1Q8TC90 406 aaPredicted RBP19.1■□□□□ 0.65
C2CD2L-202ENST00000525598 CENPBP07199 599 aaPredicted RBP19.04■□□□□ 0.64
C2CD2L-202ENST00000525598 NISCHQ9Y2I1 1504 aa19.02■□□□□ 0.64
C2CD2L-202ENST00000525598 DCAF8L2P0C7V8 631 aa18.95■□□□□ 0.62
C2CD2L-202ENST00000525598 SUPT5HO00267 1087 aaKnown RBP18.72■□□□□ 0.59
C2CD2L-202ENST00000525598 ZEB1P37275 1124 aaPredicted RBP18.67■□□□□ 0.58
C2CD2L-202ENST00000525598 TTBK1Q5TCY1 1321 aaPredicted RBP18.5■□□□□ 0.55
C2CD2L-202ENST00000525598 PCGF6Q9BYE7 350 aa18.45■□□□□ 0.54
C2CD2L-202ENST00000525598 NEFLP07196 543 aa18.44■□□□□ 0.54
C2CD2L-202ENST00000525598 YTHDC1Q96MU7 727 aaKnown RBP18.38■□□□□ 0.53
C2CD2L-202ENST00000525598 APLP2Q06481 763 aa18.35■□□□□ 0.53
C2CD2L-202ENST00000525598 EHMT2Q96KQ7 1210 aa18.12■□□□□ 0.49
C2CD2L-202ENST00000525598 DAXXQ9UER7 740 aaPredicted RBP18.01■□□□□ 0.47
C2CD2L-202ENST00000525598 RTL5Q5HYW3 569 aaPredicted RBP17.91■□□□□ 0.46
C2CD2L-202ENST00000525598 HRCP23327 699 aa17.87■□□□□ 0.45
C2CD2L-202ENST00000525598 SHROOM4Q9ULL8 1493 aa17.84■□□□□ 0.45
C2CD2L-202ENST00000525598 FAM9AQ8IZU1 332 aaPredicted RBP17.68■□□□□ 0.42
C2CD2L-202ENST00000525598 TRIM26Q12899 539 aaPredicted RBP17.6■□□□□ 0.41
C2CD2L-202ENST00000525598 ZNF316A6NFI3 1004 aaPredicted RBP17.55■□□□□ 0.4
C2CD2L-202ENST00000525598 GLIPR1L2Q4G1C9 344 aa17.46■□□□□ 0.39
C2CD2L-202ENST00000525598 TRIM41Q8WV44 630 aa17.37■□□□□ 0.37
C2CD2L-202ENST00000525598 GTF3C3Q9Y5Q9 886 aa17.34■□□□□ 0.37
C2CD2L-202ENST00000525598 DIEXFQ68CQ4 756 aaKnown RBP17.31■□□□□ 0.36
C2CD2L-202ENST00000525598 MYT1LQ9UL68 1186 aa17.29■□□□□ 0.36
C2CD2L-202ENST00000525598 EIF5BO60841 1220 aaKnown RBP17.27■□□□□ 0.36
C2CD2L-202ENST00000525598 CDK11AQ9UQ88 783 aaPredicted RBP17.25■□□□□ 0.35
C2CD2L-202ENST00000525598 CLSPNQ9HAW4 1339 aa17.23■□□□□ 0.35
C2CD2L-202ENST00000525598 UBTFP17480 764 aaKnown RBP17.2■□□□□ 0.34
C2CD2L-202ENST00000525598 PPARGC1BQ86YN6 1023 aaKnown RBP17.19■□□□□ 0.34
C2CD2L-202ENST00000525598 RANGAP1P46060 587 aaPredicted RBP17.15■□□□□ 0.34
C2CD2L-202ENST00000525598 ATP1B4Q9UN42 357 aaPredicted RBP17.11■□□□□ 0.33
C2CD2L-202ENST00000525598 ACIN1Q9UKV3 1341 aaKnown RBP17.09■□□□□ 0.33
C2CD2L-202ENST00000525598 ANP32AP39687 249 aaKnown RBP17.03■□□□□ 0.32
C2CD2L-202ENST00000525598 BCANQ96GW7 911 aa17.03■□□□□ 0.32
C2CD2L-202ENST00000525598 POLR3GLQ9BT43 218 aa16.97■□□□□ 0.31
C2CD2L-202ENST00000525598 ANP32BQ92688 251 aaKnown RBP16.92■□□□□ 0.3
C2CD2L-202ENST00000525598 HNRNPUL2Q1KMD3 747 aaKnown RBP16.82■□□□□ 0.28
C2CD2L-202ENST00000525598 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.81■□□□□ 0.28
C2CD2L-202ENST00000525598 ANP32CO43423 234 aa16.78■□□□□ 0.28
C2CD2L-202ENST00000525598 ITGAEP38570 1179 aa16.74■□□□□ 0.27
C2CD2L-202ENST00000525598 CNGB1Q14028 1251 aaPredicted RBP16.74■□□□□ 0.27
C2CD2L-202ENST00000525598 ZBTB47Q9UFB7 747 aaPredicted RBP16.73■□□□□ 0.27
C2CD2L-202ENST00000525598 TNNT2P45379 298 aaPredicted RBP16.67■□□□□ 0.26
C2CD2L-202ENST00000525598 LOC105371045A0A1W2PR82 267 aa16.64■□□□□ 0.25
C2CD2L-202ENST00000525598 NPM2Q86SE8 214 aaKnown RBP16.64■□□□□ 0.25
C2CD2L-202ENST00000525598 CHIC1Q5VXU3 224 aa16.61■□□□□ 0.25
C2CD2L-202ENST00000525598 ANP32EQ9BTT0 268 aa16.6■□□□□ 0.25
C2CD2L-202ENST00000525598 FKBP8Q14318 412 aa16.56■□□□□ 0.24
C2CD2L-202ENST00000525598 NBR1Q14596 966 aa16.56■□□□□ 0.24
C2CD2L-202ENST00000525598 UPF2Q9HAU5 1272 aaKnown RBP16.52■□□□□ 0.23
C2CD2L-202ENST00000525598 CANXP27824 592 aaKnown RBP16.51■□□□□ 0.23
C2CD2L-202ENST00000525598 HSP90AA1P07900 732 aaKnown RBP16.48■□□□□ 0.23
C2CD2L-202ENST00000525598 SCAF1Q9H7N4 1312 aaKnown RBP16.48■□□□□ 0.23
C2CD2L-202ENST00000525598 SLC4A1APQ9BWU0 796 aaKnown RBP16.48■□□□□ 0.23
C2CD2L-202ENST00000525598 ERICH6BQ5W0A0 696 aa16.47■□□□□ 0.23
C2CD2L-202ENST00000525598 BCL11AQ9H165 835 aa16.45■□□□□ 0.22
C2CD2L-202ENST00000525598 NEUROD1Q13562 356 aa16.43■□□□□ 0.22
C2CD2L-202ENST00000525598 TRIM44Q96DX7 344 aaPredicted RBP16.42■□□□□ 0.22
C2CD2L-202ENST00000525598 CDK11BP21127 795 aaKnown RBP16.39■□□□□ 0.21
C2CD2L-202ENST00000525598 NCLP19338 710 aaKnown RBP16.35■□□□□ 0.21
C2CD2L-202ENST00000525598 DDRGK1Q96HY6 314 aa16.31■□□□□ 0.2
C2CD2L-202ENST00000525598 CCDC136Q96JN2 1154 aa16.3■□□□□ 0.2
C2CD2L-202ENST00000525598 NEFMP07197 916 aa16.29■□□□□ 0.2
C2CD2L-202ENST00000525598 ARXQ96QS3 562 aa16.27■□□□□ 0.19
C2CD2L-202ENST00000525598 PPM1GO15355 546 aaPredicted RBP16.26■□□□□ 0.19
C2CD2L-202ENST00000525598 TRIM52Q96A61 297 aa16.26■□□□□ 0.19
C2CD2L-202ENST00000525598 NAP1L5Q96NT1 182 aaPredicted RBP16.26■□□□□ 0.19
C2CD2L-202ENST00000525598 FAM50AQ14320 339 aaKnown RBP16.25■□□□□ 0.19
C2CD2L-202ENST00000525598 HNRNPUQ00839 825 aaKnown RBP eCLIP16.23■□□□□ 0.19
C2CD2L-202ENST00000525598 BECN1Q14457 450 aa16.2■□□□□ 0.18
C2CD2L-202ENST00000525598 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.18■□□□□ 0.18
C2CD2L-202ENST00000525598 GOLGA6L22H0YM25 854 aa16.15■□□□□ 0.18
C2CD2L-202ENST00000525598 RTN4Q9NQC3 1192 aaKnown RBP16.13■□□□□ 0.17
C2CD2L-202ENST00000525598 ZNF326Q5BKZ1 582 aaKnown RBP16.1■□□□□ 0.17
C2CD2L-202ENST00000525598 DNTTIP2Q5QJE6 756 aaKnown RBP16.09■□□□□ 0.17
C2CD2L-202ENST00000525598 PTMAP06454 111 aaKnown RBP16.08■□□□□ 0.16
C2CD2L-202ENST00000525598 CCDC180Q9P1Z9 1646 aa16.06■□□□□ 0.16
C2CD2L-202ENST00000525598 NOP58Q9Y2X3 529 aaKnown RBP16.04■□□□□ 0.16
C2CD2L-202ENST00000525598 DEKP35659 375 aaKnown RBP16.03■□□□□ 0.16
C2CD2L-202ENST00000525598 SLC24A1O60721 1099 aa16.01■□□□□ 0.15
C2CD2L-202ENST00000525598 FAM9BQ8IZU0 186 aa16.01■□□□□ 0.15
C2CD2L-202ENST00000525598 DDX10Q13206 875 aaKnown RBP15.98■□□□□ 0.15
C2CD2L-202ENST00000525598 L1TD1Q5T7N2 865 aaKnown RBP15.97■□□□□ 0.15
C2CD2L-202ENST00000525598 MIER1Q8N108 512 aa15.95■□□□□ 0.14
C2CD2L-202ENST00000525598 DCAF1Q9Y4B6 1507 aa15.92■□□□□ 0.14
C2CD2L-202ENST00000525598 CHAF1AQ13111 956 aaPredicted RBP15.91■□□□□ 0.14
C2CD2L-202ENST00000525598 TMC1Q8TDI8 760 aa15.9■□□□□ 0.14
C2CD2L-202ENST00000525598 TONSLQ96HA7 1378 aa15.9■□□□□ 0.14
C2CD2L-202ENST00000525598 IRX6P78412 446 aaPredicted RBP15.89■□□□□ 0.13
C2CD2L-202ENST00000525598 MRS2Q9HD23 443 aa15.87■□□□□ 0.13
C2CD2L-202ENST00000525598 LAS1LQ9Y4W2 734 aaKnown RBP15.87■□□□□ 0.13
C2CD2L-202ENST00000525598 MSNP26038 577 aaKnown RBP15.87■□□□□ 0.13
C2CD2L-202ENST00000525598 AMER1Q5JTC6 1135 aaPredicted RBP15.86■□□□□ 0.13
C2CD2L-202ENST00000525598 TNNT3P45378 269 aaPredicted RBP15.85■□□□□ 0.13
C2CD2L-202ENST00000525598 ZRSR1Q15695 479 aaKnown RBP15.84■□□□□ 0.13
C2CD2L-202ENST00000525598 PPP4R2Q9NY27 417 aa15.84■□□□□ 0.13
C2CD2L-202ENST00000525598 PNNQ9H307 717 aaKnown RBP15.83■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms