Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.011e-8■■□□□ 13.1
PRPF8Q6P2Q9 ARMC6-218ENST00000543877 537 ntTSL 414.98□□□□□ -0.011e-8■■□□□ 13.1
PRPF8Q6P2Q9 NCOR1-209ENST00000436828 1969 ntTSL 1 (best)14.45□□□□□ -0.15e-6■■□□□ 13.1
PRPF8Q6P2Q9 MYO9B-208ENST00000596942 584 ntTSL 514.44□□□□□ -0.18e-9■■□□□ 13.1
PRPF8Q6P2Q9 PSMA1-212ENST00000532256 588 ntTSL 214.05□□□□□ -0.161e-8■■□□□ 13.1
PRPF8Q6P2Q9 MYO9B-209ENST00000597073 2087 ntTSL 513.97□□□□□ -0.178e-9■■□□□ 13.1
PRPF8Q6P2Q9 ITGB5-210ENST00000496703 789 ntTSL 213.97□□□□□ -0.171e-8■■□□□ 13.1
PRPF8Q6P2Q9 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.181e-8■■□□□ 13.1
PRPF8Q6P2Q9 GATAD2B-202ENST00000634401 867 ntTSL 513.88□□□□□ -0.191e-8■■□□□ 13.1
PRPF8Q6P2Q9 ITGB5-209ENST00000488466 971 ntTSL 513.86□□□□□ -0.191e-8■■□□□ 13.1
PRPF8Q6P2Q9 RFX5-210ENST00000436637 765 ntTSL 312.67□□□□□ -0.381e-8■■□□□ 13.1
PRPF8Q6P2Q9 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.471e-8■■□□□ 13.1
PRPF8Q6P2Q9 CCDC61-203ENST00000594672 433 ntAPPRIS ALT2 TSL 312.04□□□□□ -0.481e-8■■□□□ 13.1
PRPF8Q6P2Q9 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC12.03□□□□□ -0.481e-8■■□□□ 13.1
PRPF8Q6P2Q9 ALKBH2-204ENST00000536242 572 ntTSL 312□□□□□ -0.491e-8■■□□□ 13.1
PRPF8Q6P2Q9 GATAD2B-210ENST00000637331 145 ntTSL 511.93□□□□□ -0.51e-8■■□□□ 13.1
PRPF8Q6P2Q9 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.511e-8■■□□□ 13.1
PRPF8Q6P2Q9 CCDC57-218ENST00000583593 429 ntTSL 311.8□□□□□ -0.521e-8■■□□□ 13.1
PRPF8Q6P2Q9 CCDC57-204ENST00000392345 678 ntAPPRIS ALT2 TSL 311.78□□□□□ -0.521e-8■■□□□ 13.1
PRPF8Q6P2Q9 PSMA1-213ENST00000533068 571 ntTSL 411.6□□□□□ -0.551e-8■■□□□ 13.1
PRPF8Q6P2Q9 KLHDC4-224ENST00000568502 546 ntTSL 411.45□□□□□ -0.581e-8■■□□□ 13.1
PRPF8Q6P2Q9 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC11.32□□□□□ -0.61e-8■■□□□ 13.1
PRPF8Q6P2Q9 AP2A1-203ENST00000593788 611 ntTSL 311.18□□□□□ -0.621e-8■■□□□ 13.1
PRPF8Q6P2Q9 ALKBH2-206ENST00000536720 1068 ntTSL 211.08□□□□□ -0.641e-8■■□□□ 13.1
PRPF8Q6P2Q9 KLHDC4-211ENST00000563845 528 ntTSL 410.74□□□□□ -0.691e-8■■□□□ 13.1
PRPF8Q6P2Q9 KLHDC4-216ENST00000566561 564 ntTSL 410.74□□□□□ -0.691e-8■■□□□ 13.1
PRPF8Q6P2Q9 ALKBH2-202ENST00000429722 1159 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.71e-8■■□□□ 13.1
PRPF8Q6P2Q9 COX6B1-201ENST00000246554 667 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.761e-8■■□□□ 13.1
PRPF8Q6P2Q9 RFX5-218ENST00000475144 519 ntTSL 210.03□□□□□ -0.81e-8■■□□□ 13.1
PRPF8Q6P2Q9 RFX5-203ENST00000392746 2056 ntTSL 510.01□□□□□ -0.811e-8■■□□□ 13.1
PRPF8Q6P2Q9 ALKBH2-207ENST00000543444 834 ntTSL 29.84□□□□□ -0.831e-8■■□□□ 13.1
PRPF8Q6P2Q9 PPP1R13B-213ENST00000556334 970 ntTSL 1 (best)9.79□□□□□ -0.841e-8■■□□□ 13.1
PRPF8Q6P2Q9 KLHDC4-206ENST00000561825 562 ntTSL 59.65□□□□□ -0.871e-8■■□□□ 13.1
PRPF8Q6P2Q9 ANKRD46-202ENST00000358990 661 ntTSL 39.31□□□□□ -0.921e-8■■□□□ 13.1
PRPF8Q6P2Q9 SLC35B1-208ENST00000507477 2487 ntTSL 29.16□□□□□ -0.941e-8■■□□□ 13.1
PRPF8Q6P2Q9 YEATS2-205ENST00000481343 464 ntTSL 49.11□□□□□ -0.951e-8■■□□□ 13.1
PRPF8Q6P2Q9 CCDC57-205ENST00000392346 2964 ntAPPRIS ALT2 TSL 2 BASIC9.03□□□□□ -0.961e-8■■□□□ 13.1
PRPF8Q6P2Q9 ALKBH2-205ENST00000536358 1049 ntTSL 28.89□□□□□ -0.991e-8■■□□□ 13.1
PRPF8Q6P2Q9 RFX5-202ENST00000368870 2459 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.991e-8■■□□□ 13.1
PRPF8Q6P2Q9 CCDC57-209ENST00000483145 580 ntTSL 38.79□□□□□ -11e-8■■□□□ 13.1
PRPF8Q6P2Q9 RFX5-215ENST00000452671 2355 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.011e-8■■□□□ 13.1
PRPF8Q6P2Q9 ITGB5-206ENST00000476988 492 ntTSL 48.76□□□□□ -1.011e-8■■□□□ 13.1
PRPF8Q6P2Q9 RFXANK-211ENST00000543118 422 ntTSL 28.43□□□□□ -1.061e-8■■□□□ 13.1
PRPF8Q6P2Q9 MYO19-201ENST00000610496 578 ntTSL 37.79□□□□□ -1.161e-8■■□□□ 13.1
PRPF8Q6P2Q9 GATAD2B-207ENST00000634791 642 ntTSL 37.18□□□□□ -1.261e-8■■□□□ 13.1
PRPF8Q6P2Q9 POLR3E-213ENST00000565117 1549 ntTSL 26.82□□□□□ -1.321e-8■■□□□ 13.1
PRPF8Q6P2Q9 ANKRD46-206ENST00000520552 1686 ntTSL 1 (best) BASIC6.8□□□□□ -1.321e-8■■□□□ 13.1
PRPF8Q6P2Q9 RFX5-201ENST00000290524 3576 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.381e-8■■□□□ 13.1
PRPF8Q6P2Q9 ANKRD46-209ENST00000523000 567 ntTSL 45.45□□□□□ -1.541e-8■■□□□ 13.1
PRPF8Q6P2Q9 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.541e-8■■□□□ 13.1
PRPF8Q6P2Q9 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.651e-8■■□□□ 13.1
PRPF8Q6P2Q9 POLR3E-206ENST00000563282 448 ntTSL 24.5□□□□□ -1.691e-8■■□□□ 13.1
PRPF8Q6P2Q9 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.721e-8■■□□□ 13.1
PRPF8Q6P2Q9 MYO19-222ENST00000620644 565 ntTSL 43.86□□□□□ -1.791e-8■■□□□ 13.1
PRPF8Q6P2Q9 SEC63-207ENST00000466419 606 ntTSL 33.24□□□□□ -1.894e-6■■□□□ 13.1
PRPF8Q6P2Q9 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC3.2□□□□□ -1.91e-8■■□□□ 13.1
PRPF8Q6P2Q9 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC2.5□□□□□ -2.011e-8■■□□□ 13.1
PRPF8Q6P2Q9 RAB5C-205ENST00000550013 555 ntTSL 213.58□□□□□ -0.244e-11■■□□□ 13.1
PRPF8Q6P2Q9 ASGR2-205ENST00000574868 1202 ntTSL 512.52□□□□□ -0.411e-10■■□□□ 13.1
PRPF8Q6P2Q9 RAB5C-206ENST00000550406 500 ntTSL 310.83□□□□□ -0.684e-11■■□□□ 13.1
PRPF8Q6P2Q9 RAB5C-203ENST00000546881 608 ntTSL 29.93□□□□□ -0.824e-11■■□□□ 13.1
PRPF8Q6P2Q9 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC12.52□□□□□ -0.411e-10■■□□□ 13.1
PRPF8Q6P2Q9 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC12.16□□□□□ -0.461e-10■■□□□ 13.1
PRPF8Q6P2Q9 SLC1A5-202ENST00000434726 1872 ntTSL 2 BASIC11.3□□□□□ -0.61e-10■■□□□ 13.1
PRPF8Q6P2Q9 ATP6V0A1-208ENST00000586001 587 ntTSL 35.68□□□□□ -1.52e-9■■□□□ 13.1
PRPF8Q6P2Q9 DLG1-214ENST00000447466 858 ntTSL 1 (best)5.24□□□□□ -1.576e-9■■□□□ 13.1
PRPF8Q6P2Q9 DLG1-218ENST00000453607 539 ntTSL 41.54□□□□□ -2.166e-9■■□□□ 13.1
PRPF8Q6P2Q9 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.353e-6■■□□□ 13.1
PRPF8Q6P2Q9 F7-206ENST00000541084 2873 ntTSL 2 BASIC8.77□□□□□ -1.013e-6■■□□□ 13.1
PRPF8Q6P2Q9 F7-202ENST00000375581 3109 ntAPPRIS P4 TSL 1 (best) BASIC8.31□□□□□ -1.083e-6■■□□□ 13.1
PRPF8Q6P2Q9 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.243e-7■■□□□ 13.1
PRPF8Q6P2Q9 LAMB2-216ENST00000494831 582 ntTSL 210.23□□□□□ -0.771e-7■■□□□ 13.1
PRPF8Q6P2Q9 DDR1-272ENST00000513243 549 ntTSL 514.99□□□□□ -0.011e-9■■□□□ 13.1
PRPF8Q6P2Q9 ERGIC3-218ENST00000489071 582 ntTSL 27.35□□□□□ -1.232e-12■■□□□ 13.1
PRPF8Q6P2Q9 RGL2-245ENST00000491168 2316 ntTSL 213.2□□□□□ -0.32e-8■■□□□ 13.1
PRPF8Q6P2Q9 RGL2-243ENST00000483151 2772 ntTSL 210.93□□□□□ -0.662e-8■■□□□ 13.1
PRPF8Q6P2Q9 SYMPK-217ENST00000601600 560 ntTSL 48.05□□□□□ -1.129e-18■■□□□ 13.1
PRPF8Q6P2Q9 PRPF8-215ENST00000576958 416 ntTSL 210.54□□□□□ -0.729e-7■■□□□ 13
PRPF8Q6P2Q9 REC8-202ENST00000558191 561 ntTSL 48.26□□□□□ -1.099e-7■■□□□ 13
PRPF8Q6P2Q9 SH2B1-213ENST00000568868 342 ntTSL 212.44□□□□□ -0.422e-12■■□□□ 13
PRPF8Q6P2Q9 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC11.79□□□□□ -0.528e-7■■□□□ 13
PRPF8Q6P2Q9 GOLGA4-205ENST00000431105 568 ntTSL 312.21□□□□□ -0.463e-6■■□□□ 13
PRPF8Q6P2Q9 PTPN7-207ENST00000468385 1061 ntTSL 211.44□□□□□ -0.582e-6■■□□□ 13
PRPF8Q6P2Q9 MYO18A-206ENST00000529889 698 ntTSL 212.51□□□□□ -0.413e-8■■□□□ 13
PRPF8Q6P2Q9 MYO18A-212ENST00000531892 599 ntTSL 39.5□□□□□ -0.893e-8■■□□□ 13
PRPF8Q6P2Q9 KAT8-207ENST00000573144 610 ntTSL 216.29■□□□□ 0.22e-7■■□□□ 13
PRPF8Q6P2Q9 BECN1-210ENST00000589493 719 ntTSL 26.67□□□□□ -1.346e-7■■□□□ 13
PRPF8Q6P2Q9 DCTN1-212ENST00000440727 521 ntTSL 420.95■□□□□ 0.941e-9■■□□□ 13
PRPF8Q6P2Q9 FAM129B-203ENST00000465154 483 ntTSL 214.84□□□□□ -0.033e-6■■□□□ 13
PRPF8Q6P2Q9 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.121e-10■■□□□ 13
PRPF8Q6P2Q9 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC15.44■□□□□ 0.061e-10■■□□□ 13
PRPF8Q6P2Q9 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.541e-10■■□□□ 13
PRPF8Q6P2Q9 TUBG1-203ENST00000589613 916 ntTSL 1 (best)8.74□□□□□ -1.012e-6■■□□□ 13
PRPF8Q6P2Q9 SIN3B-208ENST00000596638 1104 ntTSL 56.39□□□□□ -1.394e-7■■□□□ 13
PRPF8Q6P2Q9 PSMD12-205ENST00000579365 560 ntTSL 417.14■□□□□ 0.336e-7■■□□□ 13
PRPF8Q6P2Q9 PSMD12-206ENST00000581618 613 ntTSL 415.89■□□□□ 0.136e-7■■□□□ 13
PRPF8Q6P2Q9 PSMD12-204ENST00000578015 448 ntTSL 214.79□□□□□ -0.046e-7■■□□□ 13
PRPF8Q6P2Q9 MTG2-204ENST00000466099 805 ntTSL 512.32□□□□□ -0.442e-7■■□□□ 13
PRPF8Q6P2Q9 MTG2-209ENST00000472005 566 ntTSL 57.65□□□□□ -1.182e-7■■□□□ 13
PRPF8Q6P2Q9 THBS1-202ENST00000397591 582 ntTSL 214.54□□□□□ -0.082e-6■■□□□ 13
Retrieved 100 of 73,762 protein–RNA pairs in 2833.2 ms